Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MIR3942-201ENST00000585264 109 ntBASIC-1.01□□□□□ -2.57
HIST1H3AP68431 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.02□□□□□ -2.57
HIST1H3AP68431 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.02□□□□□ -2.57
HIST1H3AP68431 RNU6-20P-201ENST00000384106 107 ntBASIC-1.02□□□□□ -2.57
HIST1H3AP68431 SNORA75-201ENST00000384158 137 ntBASIC-1.02□□□□□ -2.57
HIST1H3AP68431 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.02□□□□□ -2.57
HIST1H3AP68431 Z95118.1-201ENST00000421372 247 ntBASIC-1.02□□□□□ -2.57
HIST1H3AP68431 MTND3P7-201ENST00000474435 343 ntBASIC-1.02□□□□□ -2.57
HIST1H3AP68431 MIR2355-201ENST00000517199 87 ntBASIC-1.02□□□□□ -2.57
HIST1H3AP68431 RNU6-1184P-201ENST00000384588 108 ntBASIC-1.03□□□□□ -2.57
HIST1H3AP68431 SNORD77.3-201ENST00000391113 65 ntBASIC-1.03□□□□□ -2.57
HIST1H3AP68431 RNU6-735P-201ENST00000410612 107 ntBASIC-1.03□□□□□ -2.57
HIST1H3AP68431 BX276092.1-201ENST00000427368 251 ntBASIC-1.03□□□□□ -2.57
HIST1H3AP68431 MTND2P22-201ENST00000444325 1033 ntBASIC-1.03□□□□□ -2.57
HIST1H3AP68431 RNU6-758P-201ENST00000516292 89 ntBASIC-1.03□□□□□ -2.57
HIST1H3AP68431 SNORA25.16-201ENST00000516741 121 ntBASIC-1.03□□□□□ -2.57
HIST1H3AP68431 AC022960.3-201ENST00000619794 441 ntBASIC-1.03□□□□□ -2.57
HIST1H3AP68431 MIR6863-201ENST00000636112 90 ntBASIC-1.03□□□□□ -2.57
HIST1H3AP68431 AC073869.9-201ENST00000641610 120 ntBASIC-1.03□□□□□ -2.57
HIST1H3AP68431 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.04□□□□□ -2.58
HIST1H3AP68431 RNU6-626P-201ENST00000363354 107 ntBASIC-1.04□□□□□ -2.58
HIST1H3AP68431 SNORA63.5-201ENST00000363548 123 ntBASIC-1.04□□□□□ -2.58
HIST1H3AP68431 RNU4-50P-201ENST00000364361 141 ntBASIC-1.04□□□□□ -2.58
HIST1H3AP68431 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.04□□□□□ -2.58
HIST1H3AP68431 RNU6-938P-201ENST00000411285 103 ntBASIC-1.04□□□□□ -2.58
HIST1H3AP68431 FCF1P4-201ENST00000448326 183 ntBASIC-1.04□□□□□ -2.58
HIST1H3AP68431 AC098826.2-201ENST00000452011 651 ntBASIC-1.04□□□□□ -2.58
HIST1H3AP68431 AC063944.3-201ENST00000609969 533 ntBASIC-1.04□□□□□ -2.58
HIST1H3AP68431 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.05□□□□□ -2.58
HIST1H3AP68431 SNORD95.1-201ENST00000364099 68 ntBASIC-1.05□□□□□ -2.58
HIST1H3AP68431 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.05□□□□□ -2.58
HIST1H3AP68431 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.05□□□□□ -2.58
HIST1H3AP68431 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.05□□□□□ -2.58
HIST1H3AP68431 SNORA36B-201ENST00000410438 131 ntBASIC-1.05□□□□□ -2.58
HIST1H3AP68431 AC074085.1-201ENST00000413598 418 ntBASIC-1.05□□□□□ -2.58
HIST1H3AP68431 AF228730.4-201ENST00000421457 183 ntBASIC-1.05□□□□□ -2.58
HIST1H3AP68431 RPL30P15-201ENST00000457129 321 ntBASIC-1.05□□□□□ -2.58
HIST1H3AP68431 AL512360.1-201ENST00000555346 234 ntBASIC-1.05□□□□□ -2.58
HIST1H3AP68431 AC108676.2-201ENST00000605225 163 ntBASIC-1.05□□□□□ -2.58
HIST1H3AP68431 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.05□□□□□ -2.58
HIST1H3AP68431 MIR1244-1-201ENST00000612829 85 ntBASIC-1.05□□□□□ -2.58
HIST1H3AP68431 MIR1244-3-201ENST00000635744 85 ntBASIC-1.05□□□□□ -2.58
HIST1H3AP68431 MIR1244-2-201ENST00000636449 85 ntBASIC-1.05□□□□□ -2.58
HIST1H3AP68431 MIR1244-4-202ENST00000636813 85 ntBASIC-1.05□□□□□ -2.58
HIST1H3AP68431 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.06□□□□□ -2.58
HIST1H3AP68431 MIR224-201ENST00000384889 81 ntBASIC-1.06□□□□□ -2.58
HIST1H3AP68431 SNORD110-201ENST00000408189 75 ntBASIC-1.06□□□□□ -2.58
HIST1H3AP68431 MTATP6P17-201ENST00000431030 672 ntBASIC-1.06□□□□□ -2.58
HIST1H3AP68431 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.06□□□□□ -2.58
HIST1H3AP68431 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.06□□□□□ -2.58
HIST1H3AP68431 AC073114.1-201ENST00000612027 490 ntBASIC-1.06□□□□□ -2.58
HIST1H3AP68431 MIR3662-201ENST00000637030 95 ntBASIC-1.06□□□□□ -2.58
HIST1H3AP68431 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.07□□□□□ -2.58
HIST1H3AP68431 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.07□□□□□ -2.58
HIST1H3AP68431 RNU6-47P-201ENST00000383866 107 ntBASIC-1.07□□□□□ -2.58
HIST1H3AP68431 MIR196A1-201ENST00000388006 70 ntBASIC-1.07□□□□□ -2.58
HIST1H3AP68431 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
HIST1H3AP68431 RNU6-332P-201ENST00000391193 108 ntBASIC-1.07□□□□□ -2.58
HIST1H3AP68431 AC096949.1-201ENST00000412047 152 ntBASIC-1.07□□□□□ -2.58
HIST1H3AP68431 AC006210.1-201ENST00000424882 111 ntBASIC-1.07□□□□□ -2.58
HIST1H3AP68431 AL445193.1-201ENST00000441183 141 ntBASIC-1.07□□□□□ -2.58
HIST1H3AP68431 AC023449.1-201ENST00000454464 154 ntBASIC-1.07□□□□□ -2.58
HIST1H3AP68431 RNU6-956P-201ENST00000458868 103 ntBASIC-1.07□□□□□ -2.58
HIST1H3AP68431 RNU7-104P-201ENST00000459398 79 ntBASIC-1.07□□□□□ -2.58
HIST1H3AP68431 AC141846.1-201ENST00000568348 142 ntBASIC-1.07□□□□□ -2.58
HIST1H3AP68431 AC122108.2-201ENST00000611946 526 ntBASIC-1.07□□□□□ -2.58
HIST1H3AP68431 AL050303.3-201ENST00000613704 284 ntBASIC-1.07□□□□□ -2.58
HIST1H3AP68431 MTND4P28-201ENST00000426217 387 ntBASIC-1.08□□□□□ -2.58
HIST1H3AP68431 RNU7-96P-201ENST00000459535 64 ntBASIC-1.08□□□□□ -2.58
HIST1H3AP68431 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.08□□□□□ -2.58
HIST1H3AP68431 SNORD36C-201ENST00000516733 66 ntBASIC-1.08□□□□□ -2.58
HIST1H3AP68431 AL162413.1-201ENST00000603198 110 ntBASIC-1.08□□□□□ -2.58
HIST1H3AP68431 AC022441.3-201ENST00000605737 136 ntBASIC-1.08□□□□□ -2.58
HIST1H3AP68431 AC005014.3-201ENST00000605985 190 ntBASIC-1.08□□□□□ -2.58
HIST1H3AP68431 MIR6717-201ENST00000622747 73 ntBASIC-1.08□□□□□ -2.58
HIST1H3AP68431 AC093726.3-201ENST00000637588 150 ntBASIC-1.08□□□□□ -2.58
HIST1H3AP68431 RNU6-597P-201ENST00000365620 102 ntBASIC-1.09□□□□□ -2.58
HIST1H3AP68431 SNORD115-47-201ENST00000391226 86 ntBASIC-1.09□□□□□ -2.58
HIST1H3AP68431 AC024067.1-201ENST00000426199 223 ntBASIC-1.09□□□□□ -2.58
HIST1H3AP68431 MIR2053-201ENST00000459295 91 ntBASIC-1.09□□□□□ -2.58
HIST1H3AP68431 AC091951.2-201ENST00000500762 203 ntBASIC-1.09□□□□□ -2.58
HIST1H3AP68431 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.09□□□□□ -2.58
HIST1H3AP68431 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.09□□□□□ -2.58
HIST1H3AP68431 RNU7-149P-201ENST00000516739 59 ntBASIC-1.09□□□□□ -2.58
HIST1H3AP68431 DEFB131E-201ENST00000532329 154 ntBASIC-1.09□□□□□ -2.58
HIST1H3AP68431 MTND3P12-201ENST00000559068 328 ntBASIC-1.09□□□□□ -2.58
HIST1H3AP68431 AC124312.5-201ENST00000604451 268 ntBASIC-1.09□□□□□ -2.58
HIST1H3AP68431 RNU6-653P-201ENST00000363074 106 ntBASIC-1.1□□□□□ -2.59
HIST1H3AP68431 RNU6-455P-201ENST00000384681 107 ntBASIC-1.1□□□□□ -2.59
HIST1H3AP68431 MIR204-201ENST00000385200 110 ntBASIC-1.1□□□□□ -2.59
HIST1H3AP68431 RNU6-998P-201ENST00000515894 101 ntBASIC-1.1□□□□□ -2.59
HIST1H3AP68431 RNU6-864P-201ENST00000516256 108 ntBASIC-1.1□□□□□ -2.59
HIST1H3AP68431 SNORA25.13-201ENST00000516395 103 ntBASIC-1.1□□□□□ -2.59
HIST1H3AP68431 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.1□□□□□ -2.59
HIST1H3AP68431 RNU7-161P-201ENST00000517289 62 ntBASIC-1.1□□□□□ -2.59
HIST1H3AP68431 AC022140.2-201ENST00000623500 188 ntBASIC-1.1□□□□□ -2.59
HIST1H3AP68431 MIR342-201ENST00000362212 99 ntBASIC-1.11□□□□□ -2.59
HIST1H3AP68431 RNA5SP25-201ENST00000410815 110 ntBASIC-1.11□□□□□ -2.59
HIST1H3AP68431 MTND1P2-201ENST00000430604 821 ntBASIC-1.11□□□□□ -2.59
HIST1H3AP68431 AC010655.3-201ENST00000478818 450 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms