Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.44□□□□□ -2.64
RPS28P62857 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.44□□□□□ -2.64
RPS28P62857 RNU7-55P-201ENST00000459426 62 ntBASIC-1.44□□□□□ -2.64
RPS28P62857 RPS29P24-201ENST00000486345 171 ntBASIC-1.44□□□□□ -2.64
RPS28P62857 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.44□□□□□ -2.64
RPS28P62857 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.44□□□□□ -2.64
RPS28P62857 MIR2681-201ENST00000581814 105 ntBASIC-1.44□□□□□ -2.64
RPS28P62857 MIR4473-201ENST00000583731 91 ntBASIC-1.44□□□□□ -2.64
RPS28P62857 AL360085.1-201ENST00000604713 532 ntBASIC-1.44□□□□□ -2.64
RPS28P62857 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.45□□□□□ -2.64
RPS28P62857 RNU4-20P-201ENST00000365601 151 ntBASIC-1.45□□□□□ -2.64
RPS28P62857 SNORA27-201ENST00000384323 126 ntBASIC-1.45□□□□□ -2.64
RPS28P62857 RNU6-248P-201ENST00000410720 107 ntBASIC-1.45□□□□□ -2.64
RPS28P62857 AL009048.1-201ENST00000450437 298 ntBASIC-1.45□□□□□ -2.64
RPS28P62857 MTND1P11-201ENST00000456661 876 ntBASIC-1.45□□□□□ -2.64
RPS28P62857 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.45□□□□□ -2.64
RPS28P62857 AL356055.1-201ENST00000602528 446 ntBASIC-1.45□□□□□ -2.64
RPS28P62857 RNA5SP403-201ENST00000363598 108 ntBASIC-1.46□□□□□ -2.64
RPS28P62857 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.46□□□□□ -2.64
RPS28P62857 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.46□□□□□ -2.64
RPS28P62857 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.46□□□□□ -2.64
RPS28P62857 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.46□□□□□ -2.64
RPS28P62857 SNORA40.5-201ENST00000391061 128 ntBASIC-1.46□□□□□ -2.64
RPS28P62857 AL593851.1-201ENST00000426171 157 ntBASIC-1.46□□□□□ -2.64
RPS28P62857 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.46□□□□□ -2.64
RPS28P62857 MIR5704-201ENST00000584029 77 ntBASIC-1.46□□□□□ -2.64
RPS28P62857 AC138207.3-201ENST00000585289 166 ntBASIC-1.46□□□□□ -2.64
RPS28P62857 MIR4320-201ENST00000636981 65 ntBASIC-1.46□□□□□ -2.64
RPS28P62857 SNORD114-29-201ENST00000364819 70 ntBASIC-1.47□□□□□ -2.64
RPS28P62857 SNORD24-201ENST00000383884 75 ntBASIC-1.47□□□□□ -2.64
RPS28P62857 MIR190B-201ENST00000401119 79 ntBASIC-1.47□□□□□ -2.64
RPS28P62857 AL603914.1-201ENST00000401964 204 ntBASIC-1.47□□□□□ -2.64
RPS28P62857 USP9YP30-201ENST00000430729 455 ntBASIC-1.47□□□□□ -2.64
RPS28P62857 SNORD57-201ENST00000448188 72 ntBASIC-1.47□□□□□ -2.64
RPS28P62857 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.47□□□□□ -2.64
RPS28P62857 DEFB131E-201ENST00000532329 154 ntBASIC-1.47□□□□□ -2.64
RPS28P62857 AC145423.2-201ENST00000610631 239 ntBASIC-1.47□□□□□ -2.64
RPS28P62857 RNU6-509P-201ENST00000363519 107 ntBASIC-1.48□□□□□ -2.65
RPS28P62857 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.48□□□□□ -2.65
RPS28P62857 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.48□□□□□ -2.65
RPS28P62857 SNORA72.3-201ENST00000365074 132 ntBASIC-1.48□□□□□ -2.65
RPS28P62857 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.48□□□□□ -2.65
RPS28P62857 RNU6-408P-201ENST00000515910 100 ntBASIC-1.48□□□□□ -2.65
RPS28P62857 snoU83B.1-201ENST00000517136 88 ntBASIC-1.48□□□□□ -2.65
RPS28P62857 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.48□□□□□ -2.65
RPS28P62857 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.48□□□□□ -2.65
RPS28P62857 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.48□□□□□ -2.65
RPS28P62857 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.49□□□□□ -2.65
RPS28P62857 RNU6-601P-201ENST00000384540 107 ntBASIC-1.49□□□□□ -2.65
RPS28P62857 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.49□□□□□ -2.65
RPS28P62857 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.49□□□□□ -2.65
RPS28P62857 HLA-S-202ENST00000425174 53 ntBASIC-1.49□□□□□ -2.65
RPS28P62857 MTND3P21-201ENST00000433774 331 ntBASIC-1.49□□□□□ -2.65
RPS28P62857 FCF1P4-201ENST00000448326 183 ntBASIC-1.49□□□□□ -2.65
RPS28P62857 AC083904.1-201ENST00000487828 231 ntBASIC-1.49□□□□□ -2.65
RPS28P62857 RNA5SP461-201ENST00000516451 104 ntBASIC-1.49□□□□□ -2.65
RPS28P62857 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.49□□□□□ -2.65
RPS28P62857 AC127455.1-201ENST00000565496 145 ntBASIC-1.49□□□□□ -2.65
RPS28P62857 MIR548AE1-201ENST00000583292 70 ntBASIC-1.49□□□□□ -2.65
RPS28P62857 RNU6-254P-201ENST00000363377 107 ntBASIC-1.5□□□□□ -2.65
RPS28P62857 SNORD115-35-201ENST00000365122 82 ntBASIC-1.5□□□□□ -2.65
RPS28P62857 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.5□□□□□ -2.65
RPS28P62857 SNORD77.3-201ENST00000391113 65 ntBASIC-1.5□□□□□ -2.65
RPS28P62857 SNORD12B-201ENST00000410433 91 ntBASIC-1.5□□□□□ -2.65
RPS28P62857 MTND3P8-201ENST00000412909 339 ntBASIC-1.5□□□□□ -2.65
RPS28P62857 MTND2P14-201ENST00000482139 351 ntBASIC-1.5□□□□□ -2.65
RPS28P62857 AC141846.1-201ENST00000568348 142 ntBASIC-1.5□□□□□ -2.65
RPS28P62857 AC073648.5-201ENST00000603502 305 ntBASIC-1.5□□□□□ -2.65
RPS28P62857 AP003357.1-201ENST00000604497 148 ntBASIC-1.5□□□□□ -2.65
RPS28P62857 MIR8068-201ENST00000618032 68 ntBASIC-1.5□□□□□ -2.65
RPS28P62857 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.5□□□□□ -2.65
RPS28P62857 AC132825.6-201ENST00000638861 357 ntBASIC-1.5□□□□□ -2.65
RPS28P62857 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.51□□□□□ -2.65
RPS28P62857 SNORD115-28-201ENST00000363931 81 ntBASIC-1.51□□□□□ -2.65
RPS28P62857 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.51□□□□□ -2.65
RPS28P62857 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.51□□□□□ -2.65
RPS28P62857 RNU6-318P-201ENST00000384283 103 ntBASIC-1.51□□□□□ -2.65
RPS28P62857 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.51□□□□□ -2.65
RPS28P62857 uc_338.10-201ENST00000621872 182 ntBASIC-1.51□□□□□ -2.65
RPS28P62857 AC091931.1-201ENST00000623488 728 ntBASIC-1.51□□□□□ -2.65
RPS28P62857 FGF7P2-201ENST00000332473 296 ntBASIC-1.52□□□□□ -2.65
RPS28P62857 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.52□□□□□ -2.65
RPS28P62857 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.52□□□□□ -2.65
RPS28P62857 RNU6-306P-201ENST00000384617 107 ntBASIC-1.52□□□□□ -2.65
RPS28P62857 MIR8485-201ENST00000401372 91 ntBASIC-1.52□□□□□ -2.65
RPS28P62857 RNU6-710P-201ENST00000410424 105 ntBASIC-1.52□□□□□ -2.65
RPS28P62857 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.52□□□□□ -2.65
RPS28P62857 RNU7-134P-201ENST00000458997 64 ntBASIC-1.52□□□□□ -2.65
RPS28P62857 SERF1AP1-201ENST00000514575 187 ntBASIC-1.52□□□□□ -2.65
RPS28P62857 RNU6-155P-201ENST00000516347 100 ntBASIC-1.52□□□□□ -2.65
RPS28P62857 RNU6-479P-201ENST00000516348 105 ntBASIC-1.52□□□□□ -2.65
RPS28P62857 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.52□□□□□ -2.65
RPS28P62857 AC055872.1-201ENST00000570978 278 ntBASIC-1.52□□□□□ -2.65
RPS28P62857 AC018638.8-201ENST00000588755 281 ntBASIC-1.52□□□□□ -2.65
RPS28P62857 RNU6-653P-201ENST00000363074 106 ntBASIC-1.53□□□□□ -2.65
RPS28P62857 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.53□□□□□ -2.65
RPS28P62857 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.53□□□□□ -2.65
RPS28P62857 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.53□□□□□ -2.65
RPS28P62857 RNU6-905P-201ENST00000384434 107 ntBASIC-1.53□□□□□ -2.65
RPS28P62857 MIR1278-201ENST00000408753 81 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms