Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RNU6-86P-201ENST00000606534 107 ntBASIC-1.32□□□□□ -2.62
LSM3P62310 RNA5SP257-201ENST00000363023 116 ntBASIC-1.33□□□□□ -2.62
LSM3P62310 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.33□□□□□ -2.62
LSM3P62310 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.33□□□□□ -2.62
LSM3P62310 SNORA26.8-201ENST00000391306 124 ntBASIC-1.33□□□□□ -2.62
LSM3P62310 AC098826.2-201ENST00000452011 651 ntBASIC-1.33□□□□□ -2.62
LSM3P62310 RNU7-96P-201ENST00000459535 64 ntBASIC-1.33□□□□□ -2.62
LSM3P62310 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.33□□□□□ -2.62
LSM3P62310 RNU6-175P-201ENST00000516896 107 ntBASIC-1.33□□□□□ -2.62
LSM3P62310 MIR5589-201ENST00000579442 60 ntBASIC-1.33□□□□□ -2.62
LSM3P62310 AC124312.5-201ENST00000604451 268 ntBASIC-1.33□□□□□ -2.62
LSM3P62310 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 SNORD116-9-201ENST00000384000 95 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 SNORD116-3-201ENST00000384287 95 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 SNORD116-8-201ENST00000384365 95 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 SNORD116-7-201ENST00000384404 95 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 SNORD116-5-201ENST00000384462 95 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 SNORA36B-201ENST00000410438 131 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.34□□□□□ -2.62
LSM3P62310 AC021146.6-201ENST00000514659 117 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 RNU7-149P-201ENST00000516739 59 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 RNU6-881P-201ENST00000516813 102 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 MIR3681-201ENST00000580089 72 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 AL080274.1-201ENST00000605565 220 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 AC022140.2-201ENST00000623500 188 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 AC079248.2-201ENST00000623779 326 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 MTND5P32-201ENST00000560711 1802 ntBASIC-1.34□□□□□ -2.62
LSM3P62310 RNU4-58P-201ENST00000363192 141 ntBASIC-1.35□□□□□ -2.63
LSM3P62310 RNU6-509P-201ENST00000363519 107 ntBASIC-1.35□□□□□ -2.63
LSM3P62310 RNY1P13-201ENST00000365030 105 ntBASIC-1.35□□□□□ -2.63
LSM3P62310 RNU6-20P-201ENST00000384106 107 ntBASIC-1.35□□□□□ -2.63
LSM3P62310 MIR548A2-201ENST00000384956 97 ntBASIC-1.35□□□□□ -2.63
LSM3P62310 MIR620-201ENST00000385232 95 ntBASIC-1.35□□□□□ -2.63
LSM3P62310 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.35□□□□□ -2.63
LSM3P62310 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.35□□□□□ -2.63
LSM3P62310 AC091951.2-201ENST00000500762 203 ntBASIC-1.35□□□□□ -2.63
LSM3P62310 SNORD38.3-201ENST00000516599 73 ntBASIC-1.35□□□□□ -2.63
LSM3P62310 RNU4-73P-201ENST00000363164 141 ntBASIC-1.36□□□□□ -2.63
LSM3P62310 Y_RNA.118-201ENST00000363300 101 ntBASIC-1.36□□□□□ -2.63
LSM3P62310 RNA5SP133-201ENST00000363368 119 ntBASIC-1.36□□□□□ -2.63
LSM3P62310 RNU4-28P-201ENST00000364739 141 ntBASIC-1.36□□□□□ -2.63
LSM3P62310 SNORD116-11-201ENST00000383882 92 ntBASIC-1.36□□□□□ -2.63
LSM3P62310 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.36□□□□□ -2.63
LSM3P62310 RNY1P7-201ENST00000384743 110 ntBASIC-1.36□□□□□ -2.63
LSM3P62310 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.36□□□□□ -2.63
LSM3P62310 RNU6-710P-201ENST00000410424 105 ntBASIC-1.36□□□□□ -2.63
LSM3P62310 AC023449.1-201ENST00000454464 154 ntBASIC-1.36□□□□□ -2.63
LSM3P62310 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-1.36□□□□□ -2.63
LSM3P62310 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.36□□□□□ -2.63
LSM3P62310 AC022441.3-201ENST00000605737 136 ntBASIC-1.36□□□□□ -2.63
LSM3P62310 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.37□□□□□ -2.63
LSM3P62310 MIR181B2-201ENST00000385004 89 ntBASIC-1.37□□□□□ -2.63
LSM3P62310 RNU6-693P-201ENST00000516134 107 ntBASIC-1.37□□□□□ -2.63
LSM3P62310 RNU2-31P-201ENST00000516954 155 ntBASIC-1.37□□□□□ -2.63
LSM3P62310 MIR4528-201ENST00000577763 90 ntBASIC-1.37□□□□□ -2.63
LSM3P62310 MIR4280-201ENST00000582178 76 ntBASIC-1.37□□□□□ -2.63
LSM3P62310 AC005357.1-201ENST00000588399 301 ntBASIC-1.37□□□□□ -2.63
LSM3P62310 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.38□□□□□ -2.63
LSM3P62310 RNU6-626P-201ENST00000363354 107 ntBASIC-1.38□□□□□ -2.63
LSM3P62310 SNORD114-25-201ENST00000363742 72 ntBASIC-1.38□□□□□ -2.63
LSM3P62310 MIR539-201ENST00000365690 78 ntBASIC-1.38□□□□□ -2.63
LSM3P62310 SNORD83B-201ENST00000386745 93 ntBASIC-1.38□□□□□ -2.63
LSM3P62310 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.38□□□□□ -2.63
LSM3P62310 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.38□□□□□ -2.63
LSM3P62310 RNU2-14P-201ENST00000411053 191 ntBASIC-1.38□□□□□ -2.63
LSM3P62310 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.38□□□□□ -2.63
LSM3P62310 DEFB117-201ENST00000602356 141 ntBASIC-1.38□□□□□ -2.63
LSM3P62310 U6.109-201ENST00000636749 87 ntBASIC-1.38□□□□□ -2.63
LSM3P62310 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.39□□□□□ -2.63
LSM3P62310 MIR604-201ENST00000384880 94 ntBASIC-1.39□□□□□ -2.63
LSM3P62310 MIR224-201ENST00000384889 81 ntBASIC-1.39□□□□□ -2.63
LSM3P62310 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.39□□□□□ -2.63
LSM3P62310 SPINT5P-201ENST00000448174 155 ntBASIC-1.39□□□□□ -2.63
LSM3P62310 RNU7-141P-201ENST00000459304 62 ntBASIC-1.39□□□□□ -2.63
LSM3P62310 RNU6-273P-201ENST00000516937 96 ntBASIC-1.39□□□□□ -2.63
LSM3P62310 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.39□□□□□ -2.63
LSM3P62310 AC087752.4-201ENST00000605911 462 ntBASIC-1.39□□□□□ -2.63
LSM3P62310 AC022960.3-201ENST00000619794 441 ntBASIC-1.39□□□□□ -2.63
LSM3P62310 SNORA18-201ENST00000384416 132 ntBASIC-1.4□□□□□ -2.63
LSM3P62310 RNU6-901P-201ENST00000384593 106 ntBASIC-1.4□□□□□ -2.63
LSM3P62310 MIR1912-201ENST00000410389 80 ntBASIC-1.4□□□□□ -2.63
LSM3P62310 MTND2P9-201ENST00000422293 931 ntBASIC-1.4□□□□□ -2.63
LSM3P62310 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.4□□□□□ -2.63
LSM3P62310 MIR548AE1-201ENST00000583292 70 ntBASIC-1.4□□□□□ -2.63
LSM3P62310 MIR3942-201ENST00000585264 109 ntBASIC-1.4□□□□□ -2.63
LSM3P62310 MIR1244-1-201ENST00000612829 85 ntBASIC-1.4□□□□□ -2.63
LSM3P62310 AC011476.5-201ENST00000615594 130 ntBASIC-1.4□□□□□ -2.63
LSM3P62310 MIR1244-3-201ENST00000635744 85 ntBASIC-1.4□□□□□ -2.63
LSM3P62310 MIR1244-2-201ENST00000636449 85 ntBASIC-1.4□□□□□ -2.63
LSM3P62310 MIR1244-4-202ENST00000636813 85 ntBASIC-1.4□□□□□ -2.63
LSM3P62310 RNU4-36P-201ENST00000364294 144 ntBASIC-1.41□□□□□ -2.64
LSM3P62310 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.41□□□□□ -2.64
LSM3P62310 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.41□□□□□ -2.64
LSM3P62310 RNU6-721P-201ENST00000410155 105 ntBASIC-1.41□□□□□ -2.64
LSM3P62310 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.41□□□□□ -2.64
LSM3P62310 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.41□□□□□ -2.64
LSM3P62310 MIR302B-201ENST00000362188 73 ntBASIC-1.42□□□□□ -2.64
LSM3P62310 RNU1-141P-201ENST00000364623 158 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms