Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC131280.1-202ENST00000624067 4211 ntBASIC1.53□□□□□ -2.16
SEC61A1P61619 Y_RNA.37-201ENST00000362606 108 ntBASIC1.52□□□□□ -2.17
SEC61A1P61619 RNU6-833P-201ENST00000363486 107 ntBASIC1.52□□□□□ -2.17
SEC61A1P61619 RNU6-414P-201ENST00000363705 104 ntBASIC1.52□□□□□ -2.17
SEC61A1P61619 SNORD115-28-201ENST00000363931 81 ntBASIC1.52□□□□□ -2.17
SEC61A1P61619 RNU6-457P-201ENST00000363999 107 ntBASIC1.52□□□□□ -2.17
SEC61A1P61619 Y_RNA.242-201ENST00000364473 110 ntBASIC1.52□□□□□ -2.17
SEC61A1P61619 SNORD38C-201ENST00000384381 69 ntBASIC1.52□□□□□ -2.17
SEC61A1P61619 MIR660-201ENST00000385235 97 ntBASIC1.52□□□□□ -2.17
SEC61A1P61619 RNU6-360P-201ENST00000390944 104 ntBASIC1.52□□□□□ -2.17
SEC61A1P61619 RNU7-181P-201ENST00000517234 74 ntBASIC1.52□□□□□ -2.17
SEC61A1P61619 RNU2-60P-201ENST00000517290 128 ntBASIC1.52□□□□□ -2.17
SEC61A1P61619 AC131055.1-201ENST00000584626 316 ntBASIC1.52□□□□□ -2.17
SEC61A1P61619 AC011603.4-201ENST00000611325 277 ntBASIC1.52□□□□□ -2.17
SEC61A1P61619 AC084768.2-201ENST00000622736 221 ntBASIC1.52□□□□□ -2.17
SEC61A1P61619 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SEC61A1P61619 MIR526A1-201ENST00000384897 85 ntBASIC1.51□□□□□ -2.17
SEC61A1P61619 MIR624-201ENST00000385217 97 ntBASIC1.51□□□□□ -2.17
SEC61A1P61619 MIR1267-201ENST00000408723 78 ntBASIC1.51□□□□□ -2.17
SEC61A1P61619 RNU6-938P-201ENST00000411285 103 ntBASIC1.51□□□□□ -2.17
SEC61A1P61619 RNU6-1234P-201ENST00000516877 103 ntBASIC1.51□□□□□ -2.17
SEC61A1P61619 SNORA77B-201ENST00000578179 125 ntBASIC1.51□□□□□ -2.17
SEC61A1P61619 AL513423.1-201ENST00000621695 132 ntBASIC1.51□□□□□ -2.17
SEC61A1P61619 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
SEC61A1P61619 Y_RNA.218-201ENST00000364218 104 ntBASIC1.5□□□□□ -2.17
SEC61A1P61619 RNU6-309P-201ENST00000364573 106 ntBASIC1.5□□□□□ -2.17
SEC61A1P61619 RNU6-81P-201ENST00000365608 104 ntBASIC1.5□□□□□ -2.17
SEC61A1P61619 RNU6-959P-201ENST00000384671 107 ntBASIC1.5□□□□□ -2.17
SEC61A1P61619 AL161935.2-201ENST00000414627 60 ntBASIC1.5□□□□□ -2.17
SEC61A1P61619 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.5□□□□□ -2.17
SEC61A1P61619 JTBP1-201ENST00000441314 247 ntBASIC1.5□□□□□ -2.17
SEC61A1P61619 RNU6-237P-201ENST00000515985 71 ntBASIC1.5□□□□□ -2.17
SEC61A1P61619 RNU6-1149P-201ENST00000516810 97 ntBASIC1.5□□□□□ -2.17
SEC61A1P61619 AL353997.5-201ENST00000618886 171 ntBASIC1.5□□□□□ -2.17
SEC61A1P61619 AC134878.1-201ENST00000619901 243 ntBASIC1.5□□□□□ -2.17
SEC61A1P61619 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
SEC61A1P61619 RNU1-17P-201ENST00000363022 152 ntBASIC1.49□□□□□ -2.17
SEC61A1P61619 Y_RNA.494-201ENST00000384432 111 ntBASIC1.49□□□□□ -2.17
SEC61A1P61619 MIR194-1-201ENST00000384892 85 ntBASIC1.49□□□□□ -2.17
SEC61A1P61619 AL627390.1-201ENST00000396055 340 ntBASIC1.49□□□□□ -2.17
SEC61A1P61619 RNU4-57P-201ENST00000515980 135 ntBASIC1.49□□□□□ -2.17
SEC61A1P61619 Y_RNA.690-201ENST00000516603 95 ntBASIC1.49□□□□□ -2.17
SEC61A1P61619 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.49□□□□□ -2.17
SEC61A1P61619 AL365222.1-201ENST00000614661 98 ntBASIC1.49□□□□□ -2.17
SEC61A1P61619 MIR8074-201ENST00000615081 81 ntBASIC1.49□□□□□ -2.17
SEC61A1P61619 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.49□□□□□ -2.17
SEC61A1P61619 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.49□□□□□ -2.17
SEC61A1P61619 MIR342-201ENST00000362212 99 ntBASIC1.48□□□□□ -2.17
SEC61A1P61619 RNU6-235P-201ENST00000362644 107 ntBASIC1.48□□□□□ -2.17
SEC61A1P61619 SNORA2.2-201ENST00000365473 135 ntBASIC1.48□□□□□ -2.17
SEC61A1P61619 SNORD18B-201ENST00000365659 72 ntBASIC1.48□□□□□ -2.17
SEC61A1P61619 RNU6-1292P-201ENST00000383856 107 ntBASIC1.48□□□□□ -2.17
SEC61A1P61619 RNU6-1189P-201ENST00000383958 107 ntBASIC1.48□□□□□ -2.17
SEC61A1P61619 Y_RNA.525-201ENST00000384570 113 ntBASIC1.48□□□□□ -2.17
SEC61A1P61619 MIR452-201ENST00000385020 85 ntBASIC1.48□□□□□ -2.17
SEC61A1P61619 SNORA18.7-201ENST00000516910 131 ntBASIC1.48□□□□□ -2.17
SEC61A1P61619 AP003484.1-201ENST00000530974 250 ntBASIC1.48□□□□□ -2.17
SEC61A1P61619 MIR5197-201ENST00000583721 112 ntBASIC1.48□□□□□ -2.17
SEC61A1P61619 FAM106DP-201ENST00000586416 501 ntBASIC1.48□□□□□ -2.17
SEC61A1P61619 MIR8063-201ENST00000621930 81 ntBASIC1.48□□□□□ -2.17
SEC61A1P61619 AP001340.1-201ENST00000624405 217 ntBASIC1.48□□□□□ -2.17
SEC61A1P61619 AP000648.3-201ENST00000623539 4507 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 Y_RNA.241-201ENST00000364470 117 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 RNA5SP259-201ENST00000365541 109 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 RNU6-997P-201ENST00000384725 107 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 MIR570-201ENST00000384917 97 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 MIR30A-201ENST00000385092 71 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 MIR136-201ENST00000385207 82 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 SNORD28B-201ENST00000390993 75 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 RNU6-482P-201ENST00000391068 107 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 U8.17-201ENST00000391292 132 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 AC004965.1-201ENST00000413033 213 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 SNX2P2-201ENST00000424553 323 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 SNORD13-201ENST00000459299 104 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 SCARNA15-202ENST00000516881 127 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 U7.2-201ENST00000607576 63 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 TUG1_4.1-201ENST00000619464 181 ntBASIC1.47□□□□□ -2.17
SEC61A1P61619 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
SEC61A1P61619 Y_RNA.71-201ENST00000362892 104 ntBASIC1.46□□□□□ -2.18
SEC61A1P61619 Y_RNA.120-201ENST00000363304 110 ntBASIC1.46□□□□□ -2.18
SEC61A1P61619 Y_RNA.261-201ENST00000364631 102 ntBASIC1.46□□□□□ -2.18
SEC61A1P61619 SNORD113-1-201ENST00000365321 69 ntBASIC1.46□□□□□ -2.18
SEC61A1P61619 Y_RNA.651-201ENST00000459380 103 ntBASIC1.46□□□□□ -2.18
SEC61A1P61619 RNU6-917P-201ENST00000516294 104 ntBASIC1.46□□□□□ -2.18
SEC61A1P61619 SNORA25.15-201ENST00000516487 89 ntBASIC1.46□□□□□ -2.18
SEC61A1P61619 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.46□□□□□ -2.18
SEC61A1P61619 RNU6-250P-201ENST00000516958 103 ntBASIC1.46□□□□□ -2.18
SEC61A1P61619 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
SEC61A1P61619 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.46□□□□□ -2.18
SEC61A1P61619 AL022345.2-201ENST00000606307 135 ntBASIC1.46□□□□□ -2.18
SEC61A1P61619 RNA5SP190-201ENST00000365222 118 ntBASIC1.45□□□□□ -2.18
SEC61A1P61619 Y_RNA.410-201ENST00000383992 113 ntBASIC1.45□□□□□ -2.18
SEC61A1P61619 Y_RNA.440-201ENST00000384120 114 ntBASIC1.45□□□□□ -2.18
SEC61A1P61619 RNU6-1117P-201ENST00000384525 104 ntBASIC1.45□□□□□ -2.18
SEC61A1P61619 MIR513A1-201ENST00000385138 129 ntBASIC1.45□□□□□ -2.18
SEC61A1P61619 HSPE1P24-201ENST00000450782 238 ntBASIC1.45□□□□□ -2.18
SEC61A1P61619 RNU7-107P-201ENST00000459121 61 ntBASIC1.45□□□□□ -2.18
SEC61A1P61619 RNA5SP236-201ENST00000516169 116 ntBASIC1.45□□□□□ -2.18
SEC61A1P61619 Y_RNA.692-201ENST00000516627 105 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms