Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNU6-1270P-201ENST00000517128 108 ntBASIC1.23□□□□□ -2.21
CLDN20P56880 MRPS18CP4-201ENST00000535821 231 ntBASIC1.23□□□□□ -2.21
CLDN20P56880 MIR4498-201ENST00000577599 66 ntBASIC1.23□□□□□ -2.21
CLDN20P56880 AC072026.1-201ENST00000605023 201 ntBASIC1.23□□□□□ -2.21
CLDN20P56880 AL096861.1-201ENST00000610899 123 ntBASIC1.23□□□□□ -2.21
CLDN20P56880 MIR8065-201ENST00000620577 100 ntBASIC1.23□□□□□ -2.21
CLDN20P56880 RNU6-643P-201ENST00000384018 107 ntBASIC1.22□□□□□ -2.21
CLDN20P56880 Y_RNA.785-201ENST00000384290 109 ntBASIC1.22□□□□□ -2.21
CLDN20P56880 MIR758-201ENST00000390227 88 ntBASIC1.22□□□□□ -2.21
CLDN20P56880 SNORD28B-201ENST00000390993 75 ntBASIC1.22□□□□□ -2.21
CLDN20P56880 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.22□□□□□ -2.21
CLDN20P56880 RNU7-181P-201ENST00000517234 74 ntBASIC1.22□□□□□ -2.21
CLDN20P56880 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
CLDN20P56880 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.22□□□□□ -2.21
CLDN20P56880 U6.106-201ENST00000636360 105 ntBASIC1.22□□□□□ -2.21
CLDN20P56880 Y_RNA.23-201ENST00000362496 106 ntBASIC1.21□□□□□ -2.22
CLDN20P56880 Y_RNA.37-201ENST00000362606 108 ntBASIC1.21□□□□□ -2.22
CLDN20P56880 RNA5SP48-201ENST00000363969 126 ntBASIC1.21□□□□□ -2.22
CLDN20P56880 Y_RNA.370-201ENST00000365589 108 ntBASIC1.21□□□□□ -2.22
CLDN20P56880 RNU6-1054P-201ENST00000411293 104 ntBASIC1.21□□□□□ -2.22
CLDN20P56880 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.21□□□□□ -2.22
CLDN20P56880 AC108729.3-201ENST00000513484 108 ntBASIC1.21□□□□□ -2.22
CLDN20P56880 AP002392.1-201ENST00000537692 208 ntBASIC1.21□□□□□ -2.22
CLDN20P56880 MIR3192-201ENST00000584920 77 ntBASIC1.21□□□□□ -2.22
CLDN20P56880 AC134878.1-201ENST00000619901 243 ntBASIC1.21□□□□□ -2.22
CLDN20P56880 AC008133.2-201ENST00000624540 351 ntBASIC1.21□□□□□ -2.22
CLDN20P56880 Y_RNA.29-201ENST00000362570 113 ntBASIC1.2□□□□□ -2.22
CLDN20P56880 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CLDN20P56880 RNU1-123P-201ENST00000458950 160 ntBASIC1.2□□□□□ -2.22
CLDN20P56880 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.2□□□□□ -2.22
CLDN20P56880 AL133373.1-201ENST00000497098 94 ntBASIC1.2□□□□□ -2.22
CLDN20P56880 RNU7-41P-201ENST00000515917 61 ntBASIC1.2□□□□□ -2.22
CLDN20P56880 SNORD116-25-201ENST00000516517 92 ntBASIC1.2□□□□□ -2.22
CLDN20P56880 SNORA81.3-201ENST00000517283 198 ntBASIC1.2□□□□□ -2.22
CLDN20P56880 MIR3671-201ENST00000580455 88 ntBASIC1.2□□□□□ -2.22
CLDN20P56880 MIR378D2-201ENST00000580636 98 ntBASIC1.2□□□□□ -2.22
CLDN20P56880 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-34-201ENST00000362441 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-12-201ENST00000362583 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-29-201ENST00000362834 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-9-201ENST00000362912 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-21-201ENST00000362963 81 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-14-201ENST00000363090 81 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-13-201ENST00000363358 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-41-201ENST00000363608 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-11-201ENST00000363616 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-5-201ENST00000363633 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-39-201ENST00000363694 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-4-201ENST00000363810 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-16-201ENST00000363887 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-6-201ENST00000363942 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-42-201ENST00000364273 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 RNU6-312P-201ENST00000364629 107 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-15-201ENST00000364809 81 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-1-201ENST00000364961 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-26-201ENST00000365067 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-10-201ENST00000365073 81 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 RNU6-1318P-201ENST00000365389 103 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-43-201ENST00000365503 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-36-201ENST00000365629 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 Y_RNA.410-201ENST00000383992 113 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD26-201ENST00000384147 75 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 Y_RNA.537-201ENST00000384626 109 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 Y_RNA.542-201ENST00000384641 111 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 RNU6-938P-201ENST00000411285 103 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 AF228730.3-201ENST00000436691 102 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 AC245047.7-201ENST00000440265 293 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 AC107297.1-201ENST00000459991 176 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 AC048334.1-201ENST00000477975 159 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 AC004223.1-201ENST00000479840 271 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORA31.4-201ENST00000516049 129 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 RNU6-1219P-201ENST00000516143 112 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 RNU6-794P-201ENST00000517261 64 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 AC022559.1-201ENST00000520905 205 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.19□□□□□ -2.22
CLDN20P56880 MIR4431-201ENST00000579990 94 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 SNORD115-40-201ENST00000606510 82 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 AL157834.3-201ENST00000615543 103 ntBASIC1.19□□□□□ -2.22
CLDN20P56880 RNU6-978P-201ENST00000364371 103 ntBASIC1.18□□□□□ -2.22
CLDN20P56880 Y_RNA.241-201ENST00000364470 117 ntBASIC1.18□□□□□ -2.22
CLDN20P56880 SNORA40.5-201ENST00000391061 128 ntBASIC1.18□□□□□ -2.22
CLDN20P56880 RNU7-120P-201ENST00000459334 63 ntBASIC1.18□□□□□ -2.22
CLDN20P56880 RNU2-13P-201ENST00000515909 113 ntBASIC1.18□□□□□ -2.22
CLDN20P56880 SNORA31.2-201ENST00000516019 134 ntBASIC1.18□□□□□ -2.22
CLDN20P56880 AP003484.1-201ENST00000530974 250 ntBASIC1.18□□□□□ -2.22
CLDN20P56880 AL365205.2-201ENST00000594586 68 ntBASIC1.18□□□□□ -2.22
CLDN20P56880 MIR4791-201ENST00000607666 84 ntBASIC1.18□□□□□ -2.22
CLDN20P56880 AC090425.1-201ENST00000610007 140 ntBASIC1.18□□□□□ -2.22
CLDN20P56880 AL353770.2-201ENST00000620024 78 ntBASIC1.18□□□□□ -2.22
CLDN20P56880 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
CLDN20P56880 SNORA1-201ENST00000384107 130 ntBASIC1.17□□□□□ -2.22
CLDN20P56880 SNORA51.10-201ENST00000384418 136 ntBASIC1.17□□□□□ -2.22
CLDN20P56880 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.17□□□□□ -2.22
CLDN20P56880 snoU13.25-201ENST00000458945 104 ntBASIC1.17□□□□□ -2.22
CLDN20P56880 RPS26P48-201ENST00000491713 339 ntBASIC1.17□□□□□ -2.22
CLDN20P56880 AC090821.2-201ENST00000523552 176 ntBASIC1.17□□□□□ -2.22
CLDN20P56880 AL359821.1-201ENST00000605519 182 ntBASIC1.17□□□□□ -2.22
CLDN20P56880 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.17□□□□□ -2.22
CLDN20P56880 MIR4251-201ENST00000635819 61 ntBASIC1.17□□□□□ -2.22
CLDN20P56880 RNU6-1292P-201ENST00000383856 107 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms