Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC025033.1-201ENST00000463883 194 ntBASIC1.91□□□□□ -2.1
PER3P56645 RNA5SP236-201ENST00000516169 116 ntBASIC1.91□□□□□ -2.1
PER3P56645 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.91□□□□□ -2.1
PER3P56645 AC106754.2-201ENST00000623006 233 ntBASIC1.91□□□□□ -2.1
PER3P56645 AC091895.1-201ENST00000624494 256 ntBASIC1.91□□□□□ -2.1
PER3P56645 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PER3P56645 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
PER3P56645 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.1
PER3P56645 Y_RNA.226-201ENST00000364337 114 ntBASIC1.9□□□□□ -2.11
PER3P56645 MIR136-201ENST00000385207 82 ntBASIC1.9□□□□□ -2.11
PER3P56645 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
PER3P56645 U8.17-201ENST00000391292 132 ntBASIC1.9□□□□□ -2.11
PER3P56645 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.9□□□□□ -2.11
PER3P56645 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.9□□□□□ -2.11
PER3P56645 RNA5SP182-201ENST00000516064 82 ntBASIC1.9□□□□□ -2.11
PER3P56645 RNU7-181P-201ENST00000517234 74 ntBASIC1.9□□□□□ -2.11
PER3P56645 AP003484.1-201ENST00000530974 250 ntBASIC1.9□□□□□ -2.11
PER3P56645 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.89□□□□□ -2.11
PER3P56645 RNU1-17P-201ENST00000363022 152 ntBASIC1.89□□□□□ -2.11
PER3P56645 Y_RNA.120-201ENST00000363304 110 ntBASIC1.89□□□□□ -2.11
PER3P56645 RNU6-1189P-201ENST00000383958 107 ntBASIC1.89□□□□□ -2.11
PER3P56645 Y_RNA.440-201ENST00000384120 114 ntBASIC1.89□□□□□ -2.11
PER3P56645 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
PER3P56645 AC087499.4-201ENST00000448505 178 ntBASIC1.89□□□□□ -2.11
PER3P56645 RNU6-1149P-201ENST00000516810 97 ntBASIC1.89□□□□□ -2.11
PER3P56645 AP001328.1-201ENST00000528550 176 ntBASIC1.89□□□□□ -2.11
PER3P56645 RNU6-971P-201ENST00000516920 106 ntBASIC1.88□□□□□ -2.11
PER3P56645 AC015688.6-201ENST00000577737 104 ntBASIC1.88□□□□□ -2.11
PER3P56645 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.88□□□□□ -2.11
PER3P56645 MIR5002-201ENST00000584713 97 ntBASIC1.88□□□□□ -2.11
PER3P56645 FAM106DP-201ENST00000586416 501 ntBASIC1.88□□□□□ -2.11
PER3P56645 MIR6845-201ENST00000613182 61 ntBASIC1.88□□□□□ -2.11
PER3P56645 MIR8074-201ENST00000615081 81 ntBASIC1.88□□□□□ -2.11
PER3P56645 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
PER3P56645 RNU6-309P-201ENST00000364573 106 ntBASIC1.87□□□□□ -2.11
PER3P56645 RNA5SP160-201ENST00000364866 120 ntBASIC1.87□□□□□ -2.11
PER3P56645 Y_RNA.294-201ENST00000364916 102 ntBASIC1.87□□□□□ -2.11
PER3P56645 RNU6-959P-201ENST00000384671 107 ntBASIC1.87□□□□□ -2.11
PER3P56645 MIR513A1-201ENST00000385138 129 ntBASIC1.87□□□□□ -2.11
PER3P56645 MIR653-201ENST00000385279 96 ntBASIC1.87□□□□□ -2.11
PER3P56645 AL023284.1-201ENST00000403956 276 ntBASIC1.87□□□□□ -2.11
PER3P56645 MIR1287-201ENST00000408492 90 ntBASIC1.87□□□□□ -2.11
PER3P56645 MIR1267-201ENST00000408723 78 ntBASIC1.87□□□□□ -2.11
PER3P56645 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
PER3P56645 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.87□□□□□ -2.11
PER3P56645 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.87□□□□□ -2.11
PER3P56645 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PER3P56645 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
PER3P56645 Y_RNA.218-201ENST00000364218 104 ntBASIC1.86□□□□□ -2.11
PER3P56645 SNORA2.2-201ENST00000365473 135 ntBASIC1.86□□□□□ -2.11
PER3P56645 SNORD28B-201ENST00000390993 75 ntBASIC1.86□□□□□ -2.11
PER3P56645 AL603914.1-201ENST00000401964 204 ntBASIC1.86□□□□□ -2.11
PER3P56645 SUMO2P12-201ENST00000405924 140 ntBASIC1.86□□□□□ -2.11
PER3P56645 AL445685.2-201ENST00000422551 342 ntBASIC1.86□□□□□ -2.11
PER3P56645 AL606753.1-201ENST00000427435 87 ntBASIC1.86□□□□□ -2.11
PER3P56645 Y_RNA.651-201ENST00000459380 103 ntBASIC1.86□□□□□ -2.11
PER3P56645 SNORD123-201ENST00000459473 70 ntBASIC1.86□□□□□ -2.11
PER3P56645 AC005908.1-201ENST00000468701 347 ntBASIC1.86□□□□□ -2.11
PER3P56645 RPS26P48-201ENST00000491713 339 ntBASIC1.86□□□□□ -2.11
PER3P56645 SNORA18.7-201ENST00000516910 131 ntBASIC1.86□□□□□ -2.11
PER3P56645 MIR3121-201ENST00000579680 77 ntBASIC1.86□□□□□ -2.11
PER3P56645 MIR548AR-201ENST00000582191 57 ntBASIC1.86□□□□□ -2.11
PER3P56645 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
PER3P56645 U7.2-201ENST00000607576 63 ntBASIC1.86□□□□□ -2.11
PER3P56645 Y_RNA.280-201ENST00000364765 112 ntBASIC1.85□□□□□ -2.11
PER3P56645 RNA5SP259-201ENST00000365541 109 ntBASIC1.85□□□□□ -2.11
PER3P56645 SNORA40.5-201ENST00000391061 128 ntBASIC1.85□□□□□ -2.11
PER3P56645 RNU2-13P-201ENST00000515909 113 ntBASIC1.85□□□□□ -2.11
PER3P56645 Y_RNA.690-201ENST00000516603 95 ntBASIC1.85□□□□□ -2.11
PER3P56645 MIR4781-201ENST00000585250 76 ntBASIC1.85□□□□□ -2.11
PER3P56645 snoU13.31-201ENST00000607291 104 ntBASIC1.85□□□□□ -2.11
PER3P56645 TUG1_4.1-201ENST00000619464 181 ntBASIC1.85□□□□□ -2.11
PER3P56645 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
PER3P56645 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.84□□□□□ -2.11
PER3P56645 MIR378A-201ENST00000362177 66 ntBASIC1.84□□□□□ -2.11
PER3P56645 MIR302D-201ENST00000362275 68 ntBASIC1.84□□□□□ -2.11
PER3P56645 Y_RNA.241-201ENST00000364470 117 ntBASIC1.84□□□□□ -2.11
PER3P56645 MIR676-201ENST00000390702 67 ntBASIC1.84□□□□□ -2.11
PER3P56645 RNU6-1211P-201ENST00000459179 105 ntBASIC1.84□□□□□ -2.11
PER3P56645 SNORA31.4-201ENST00000516049 129 ntBASIC1.84□□□□□ -2.11
PER3P56645 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.84□□□□□ -2.11
PER3P56645 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-34-201ENST00000362441 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-12-201ENST00000362583 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-29-201ENST00000362834 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-9-201ENST00000362912 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-21-201ENST00000362963 81 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-14-201ENST00000363090 81 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-13-201ENST00000363358 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-41-201ENST00000363608 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-11-201ENST00000363616 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-5-201ENST00000363633 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-39-201ENST00000363694 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-4-201ENST00000363810 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-16-201ENST00000363887 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-6-201ENST00000363942 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-42-201ENST00000364273 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-15-201ENST00000364809 81 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-1-201ENST00000364961 82 ntBASIC1.83□□□□□ -2.12
PER3P56645 SNORD115-26-201ENST00000365067 82 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms