Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC006006.1-201ENST00000603082 144 ntBASIC0.89□□□□□ -2.27
PEX3P56589 SEPT14P17-201ENST00000617978 177 ntBASIC0.89□□□□□ -2.27
PEX3P56589 MIR4251-201ENST00000635819 61 ntBASIC0.89□□□□□ -2.27
PEX3P56589 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.89□□□□□ -2.27
PEX3P56589 Y_RNA.76-201ENST00000362931 109 ntBASIC0.88□□□□□ -2.27
PEX3P56589 SNORD24-201ENST00000383884 75 ntBASIC0.88□□□□□ -2.27
PEX3P56589 RNU6-381P-201ENST00000391259 108 ntBASIC0.88□□□□□ -2.27
PEX3P56589 RNU6-938P-201ENST00000411285 103 ntBASIC0.88□□□□□ -2.27
PEX3P56589 AC023449.1-201ENST00000454464 154 ntBASIC0.88□□□□□ -2.27
PEX3P56589 MTND1P19-201ENST00000511780 315 ntBASIC0.88□□□□□ -2.27
PEX3P56589 RNU6-351P-201ENST00000516097 100 ntBASIC0.88□□□□□ -2.27
PEX3P56589 RNU11-2P-201ENST00000516898 142 ntBASIC0.88□□□□□ -2.27
PEX3P56589 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.88□□□□□ -2.27
PEX3P56589 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.88□□□□□ -2.27
PEX3P56589 AC008163.1-202ENST00000636004 2889 ntBASIC0.87□□□□□ -2.27
PEX3P56589 RNU6-888P-201ENST00000363010 101 ntBASIC0.87□□□□□ -2.27
PEX3P56589 Y_RNA.370-201ENST00000365589 108 ntBASIC0.87□□□□□ -2.27
PEX3P56589 RNY3P5-201ENST00000384127 102 ntBASIC0.87□□□□□ -2.27
PEX3P56589 MIR570-201ENST00000384917 97 ntBASIC0.87□□□□□ -2.27
PEX3P56589 MIR616-201ENST00000385293 97 ntBASIC0.87□□□□□ -2.27
PEX3P56589 RNU2-55P-201ENST00000411146 174 ntBASIC0.87□□□□□ -2.27
PEX3P56589 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.87□□□□□ -2.27
PEX3P56589 RNU7-90P-201ENST00000459216 62 ntBASIC0.87□□□□□ -2.27
PEX3P56589 SNORD124-201ENST00000459577 104 ntBASIC0.87□□□□□ -2.27
PEX3P56589 RNU6-1045P-201ENST00000516321 107 ntBASIC0.87□□□□□ -2.27
PEX3P56589 MIR4791-201ENST00000607666 84 ntBASIC0.87□□□□□ -2.27
PEX3P56589 AL365265.1-201ENST00000621045 234 ntBASIC0.87□□□□□ -2.27
PEX3P56589 Y_RNA.162-201ENST00000363683 102 ntBASIC0.86□□□□□ -2.27
PEX3P56589 SNORD61-201ENST00000384252 73 ntBASIC0.86□□□□□ -2.27
PEX3P56589 Y_RNA.494-201ENST00000384432 111 ntBASIC0.86□□□□□ -2.27
PEX3P56589 MT-TT-201ENST00000387460 66 ntBASIC0.86□□□□□ -2.27
PEX3P56589 Y_RNA.590-201ENST00000410140 107 ntBASIC0.86□□□□□ -2.27
PEX3P56589 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.86□□□□□ -2.27
PEX3P56589 RNU6-126P-201ENST00000516685 103 ntBASIC0.86□□□□□ -2.27
PEX3P56589 RNU6-453P-201ENST00000516819 85 ntBASIC0.86□□□□□ -2.27
PEX3P56589 AL020996.3-201ENST00000606617 222 ntBASIC0.86□□□□□ -2.27
PEX3P56589 AL442067.1-201ENST00000613261 223 ntBASIC0.86□□□□□ -2.27
PEX3P56589 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.86□□□□□ -2.27
PEX3P56589 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
PEX3P56589 SNORA1.2-201ENST00000365189 134 ntBASIC0.85□□□□□ -2.27
PEX3P56589 Y_RNA.556-201ENST00000384677 113 ntBASIC0.85□□□□□ -2.27
PEX3P56589 MIR200A-201ENST00000384875 90 ntBASIC0.85□□□□□ -2.27
PEX3P56589 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
PEX3P56589 RNU6-613P-201ENST00000410412 108 ntBASIC0.85□□□□□ -2.27
PEX3P56589 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
PEX3P56589 AC109810.1-201ENST00000534066 224 ntBASIC0.85□□□□□ -2.27
PEX3P56589 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.85□□□□□ -2.27
PEX3P56589 MIR548AO-201ENST00000579992 96 ntBASIC0.85□□□□□ -2.27
PEX3P56589 AC108706.1-201ENST00000611053 297 ntBASIC0.85□□□□□ -2.27
PEX3P56589 MIR6516-201ENST00000630554 81 ntBASIC0.85□□□□□ -2.27
PEX3P56589 MTND1P7-201ENST00000632801 297 ntBASIC0.85□□□□□ -2.27
PEX3P56589 SNORD115-34-201ENST00000362441 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-12-201ENST00000362583 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-29-201ENST00000362834 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-9-201ENST00000362912 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-21-201ENST00000362963 81 ntBASIC0.84□□□□□ -2.27
PEX3P56589 Y_RNA.91-201ENST00000363042 107 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-14-201ENST00000363090 81 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-13-201ENST00000363358 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-41-201ENST00000363608 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-11-201ENST00000363616 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-5-201ENST00000363633 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-39-201ENST00000363694 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-4-201ENST00000363810 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-16-201ENST00000363887 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-28-201ENST00000363931 81 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-6-201ENST00000363942 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-42-201ENST00000364273 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 Y_RNA.277-201ENST00000364754 102 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-15-201ENST00000364809 81 ntBASIC0.84□□□□□ -2.27
PEX3P56589 Y_RNA.634-201ENST00000364811 113 ntBASIC0.84□□□□□ -2.27
PEX3P56589 Y_RNA.288-201ENST00000364854 92 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-1-201ENST00000364961 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-26-201ENST00000365067 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-10-201ENST00000365073 81 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-43-201ENST00000365503 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-36-201ENST00000365629 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORA51.10-201ENST00000384418 136 ntBASIC0.84□□□□□ -2.27
PEX3P56589 Y_RNA.539-201ENST00000384635 107 ntBASIC0.84□□□□□ -2.27
PEX3P56589 MIR548H3-201ENST00000408771 118 ntBASIC0.84□□□□□ -2.27
PEX3P56589 RNU6-847P-201ENST00000411115 108 ntBASIC0.84□□□□□ -2.27
PEX3P56589 AC087499.4-201ENST00000448505 178 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNRPGP8-201ENST00000454064 226 ntBASIC0.84□□□□□ -2.27
PEX3P56589 RNU6-1132P-201ENST00000459214 107 ntBASIC0.84□□□□□ -2.27
PEX3P56589 RNA5SP153-201ENST00000516498 76 ntBASIC0.84□□□□□ -2.27
PEX3P56589 AC131055.1-201ENST00000584626 316 ntBASIC0.84□□□□□ -2.27
PEX3P56589 AC013244.2-201ENST00000603396 103 ntBASIC0.84□□□□□ -2.27
PEX3P56589 AP000942.4-201ENST00000604811 241 ntBASIC0.84□□□□□ -2.27
PEX3P56589 SNORD115-40-201ENST00000606510 82 ntBASIC0.84□□□□□ -2.27
PEX3P56589 Y_RNA.37-201ENST00000362606 108 ntBASIC0.83□□□□□ -2.28
PEX3P56589 RNU6-654P-201ENST00000364373 107 ntBASIC0.83□□□□□ -2.28
PEX3P56589 RNU4-17P-201ENST00000365598 141 ntBASIC0.83□□□□□ -2.28
PEX3P56589 Y_RNA.416-201ENST00000384014 113 ntBASIC0.83□□□□□ -2.28
PEX3P56589 RNU6-1228P-201ENST00000391014 107 ntBASIC0.83□□□□□ -2.28
PEX3P56589 AL606845.1-201ENST00000404881 255 ntBASIC0.83□□□□□ -2.28
PEX3P56589 MIR548J-201ENST00000408833 112 ntBASIC0.83□□□□□ -2.28
PEX3P56589 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
PEX3P56589 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.83□□□□□ -2.28
PEX3P56589 SNORA18.4-201ENST00000516440 124 ntBASIC0.83□□□□□ -2.28
PEX3P56589 AC036111.3-201ENST00000526389 112 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms