Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.35□□□□□ -2.35
CDH4P55283 SNORA68.3-201ENST00000515906 83 ntBASIC0.35□□□□□ -2.35
CDH4P55283 AL049861.1-201ENST00000603130 150 ntBASIC0.35□□□□□ -2.35
CDH4P55283 uc_338.6-201ENST00000613544 171 ntBASIC0.35□□□□□ -2.35
CDH4P55283 AC090971.5-201ENST00000621102 293 ntBASIC0.35□□□□□ -2.35
CDH4P55283 SNORD115-34-201ENST00000362441 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-12-201ENST00000362583 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 RNU6-1272P-201ENST00000362776 107 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-29-201ENST00000362834 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-9-201ENST00000362912 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-21-201ENST00000362963 81 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-14-201ENST00000363090 81 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-13-201ENST00000363358 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-41-201ENST00000363608 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-11-201ENST00000363616 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-5-201ENST00000363633 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-39-201ENST00000363694 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-4-201ENST00000363810 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-16-201ENST00000363887 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-6-201ENST00000363942 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-42-201ENST00000364273 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 RNU6-450P-201ENST00000364654 107 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-15-201ENST00000364809 81 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-1-201ENST00000364961 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-26-201ENST00000365067 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-10-201ENST00000365073 81 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-43-201ENST00000365503 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-36-201ENST00000365629 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 MIR520H-201ENST00000385126 88 ntBASIC0.34□□□□□ -2.36
CDH4P55283 MT-TD-201ENST00000387419 68 ntBASIC0.34□□□□□ -2.36
CDH4P55283 Y_RNA.587-201ENST00000391210 103 ntBASIC0.34□□□□□ -2.36
CDH4P55283 MIR1252-201ENST00000408861 65 ntBASIC0.34□□□□□ -2.36
CDH4P55283 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
CDH4P55283 SNORD77.4-201ENST00000516158 81 ntBASIC0.34□□□□□ -2.36
CDH4P55283 MIR5692C2-201ENST00000577959 77 ntBASIC0.34□□□□□ -2.36
CDH4P55283 MIR4804-201ENST00000581683 73 ntBASIC0.34□□□□□ -2.36
CDH4P55283 AC020891.4-201ENST00000605745 93 ntBASIC0.34□□□□□ -2.36
CDH4P55283 SNORD115-40-201ENST00000606510 82 ntBASIC0.34□□□□□ -2.36
CDH4P55283 MIR8055-201ENST00000610739 97 ntBASIC0.34□□□□□ -2.36
CDH4P55283 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.34□□□□□ -2.36
CDH4P55283 snoU2_19.2-201ENST00000363024 80 ntBASIC0.33□□□□□ -2.36
CDH4P55283 Y_RNA.241-201ENST00000364470 117 ntBASIC0.33□□□□□ -2.36
CDH4P55283 Y_RNA.486-201ENST00000384398 107 ntBASIC0.33□□□□□ -2.36
CDH4P55283 MIR520F-201ENST00000384824 87 ntBASIC0.33□□□□□ -2.36
CDH4P55283 MIR548A2-201ENST00000384956 97 ntBASIC0.33□□□□□ -2.36
CDH4P55283 RNU6-913P-201ENST00000390913 95 ntBASIC0.33□□□□□ -2.36
CDH4P55283 AC023449.1-201ENST00000454464 154 ntBASIC0.33□□□□□ -2.36
CDH4P55283 RNU7-56P-201ENST00000458744 62 ntBASIC0.33□□□□□ -2.36
CDH4P55283 AC107297.1-201ENST00000459991 176 ntBASIC0.33□□□□□ -2.36
CDH4P55283 RNU6-977P-201ENST00000516411 103 ntBASIC0.33□□□□□ -2.36
CDH4P55283 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.33□□□□□ -2.36
CDH4P55283 MIR4771-2-201ENST00000577758 74 ntBASIC0.33□□□□□ -2.36
CDH4P55283 MIR4771-1-201ENST00000582617 74 ntBASIC0.33□□□□□ -2.36
CDH4P55283 AP000942.4-201ENST00000604811 241 ntBASIC0.33□□□□□ -2.36
CDH4P55283 AC134878.1-201ENST00000619901 243 ntBASIC0.33□□□□□ -2.36
CDH4P55283 AC010487.4-201ENST00000637027 61 ntBASIC0.33□□□□□ -2.36
CDH4P55283 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
CDH4P55283 MIR18A-201ENST00000362310 71 ntBASIC0.32□□□□□ -2.36
CDH4P55283 SNORD115-28-201ENST00000363931 81 ntBASIC0.32□□□□□ -2.36
CDH4P55283 RNU6-290P-201ENST00000365212 101 ntBASIC0.32□□□□□ -2.36
CDH4P55283 Y_RNA.541-201ENST00000384640 113 ntBASIC0.32□□□□□ -2.36
CDH4P55283 MIR518F-201ENST00000384973 87 ntBASIC0.32□□□□□ -2.36
CDH4P55283 AC087499.4-201ENST00000448505 178 ntBASIC0.32□□□□□ -2.36
CDH4P55283 RNU7-67P-201ENST00000459003 62 ntBASIC0.32□□□□□ -2.36
CDH4P55283 MTCO2P24-201ENST00000515611 426 ntBASIC0.32□□□□□ -2.36
CDH4P55283 SNORA18.4-201ENST00000516440 124 ntBASIC0.32□□□□□ -2.36
CDH4P55283 RNU6-958P-201ENST00000516995 106 ntBASIC0.32□□□□□ -2.36
CDH4P55283 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.32□□□□□ -2.36
CDH4P55283 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.32□□□□□ -2.36
CDH4P55283 MIR4676-201ENST00000583078 72 ntBASIC0.32□□□□□ -2.36
CDH4P55283 AL355297.3-201ENST00000604082 446 ntBASIC0.32□□□□□ -2.36
CDH4P55283 MIR6740-201ENST00000618268 113 ntBASIC0.32□□□□□ -2.36
CDH4P55283 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.32□□□□□ -2.36
CDH4P55283 Y_RNA.14-201ENST00000362415 103 ntBASIC0.31□□□□□ -2.36
CDH4P55283 Y_RNA.37-201ENST00000362606 108 ntBASIC0.31□□□□□ -2.36
CDH4P55283 Y_RNA.217-201ENST00000364214 105 ntBASIC0.31□□□□□ -2.36
CDH4P55283 RNU6-474P-201ENST00000384243 107 ntBASIC0.31□□□□□ -2.36
CDH4P55283 Y_RNA.509-201ENST00000384506 99 ntBASIC0.31□□□□□ -2.36
CDH4P55283 MIR215-201ENST00000384858 110 ntBASIC0.31□□□□□ -2.36
CDH4P55283 MIR193B-201ENST00000384907 83 ntBASIC0.31□□□□□ -2.36
CDH4P55283 MIR7-2-201ENST00000384970 110 ntBASIC0.31□□□□□ -2.36
CDH4P55283 SNORA40.5-201ENST00000391061 128 ntBASIC0.31□□□□□ -2.36
CDH4P55283 ELOCP20-201ENST00000422460 345 ntBASIC0.31□□□□□ -2.36
CDH4P55283 RNU7-73P-201ENST00000458743 63 ntBASIC0.31□□□□□ -2.36
CDH4P55283 RNU7-62P-201ENST00000458856 62 ntBASIC0.31□□□□□ -2.36
CDH4P55283 Y_RNA.641-201ENST00000459414 105 ntBASIC0.31□□□□□ -2.36
CDH4P55283 RNU2-31P-201ENST00000516954 155 ntBASIC0.31□□□□□ -2.36
CDH4P55283 MIR4724-201ENST00000579485 89 ntBASIC0.31□□□□□ -2.36
CDH4P55283 MIR3612-201ENST00000579753 87 ntBASIC0.31□□□□□ -2.36
CDH4P55283 Z97988.1-201ENST00000637697 135 ntBASIC0.31□□□□□ -2.36
CDH4P55283 MTND4P29-201ENST00000503122 1372 ntBASIC0.31□□□□□ -2.36
CDH4P55283 MIR367-201ENST00000362299 68 ntBASIC0.3□□□□□ -2.36
CDH4P55283 Y_RNA.28-201ENST00000362554 111 ntBASIC0.3□□□□□ -2.36
CDH4P55283 Y_RNA.214-201ENST00000364201 112 ntBASIC0.3□□□□□ -2.36
CDH4P55283 RNU6-326P-201ENST00000365480 107 ntBASIC0.3□□□□□ -2.36
CDH4P55283 Y_RNA.394-201ENST00000383942 103 ntBASIC0.3□□□□□ -2.36
CDH4P55283 RNU6-662P-201ENST00000384253 104 ntBASIC0.3□□□□□ -2.36
CDH4P55283 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
CDH4P55283 MIR4662B-201ENST00000579498 81 ntBASIC0.3□□□□□ -2.36
CDH4P55283 AL162730.1-201ENST00000605734 292 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 195.3 ms