Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 Y_RNA.60-201ENST00000362831 98 ntBASIC0.78□□□□□ -2.28
VCPP55072 Y_RNA.84-201ENST00000363011 104 ntBASIC0.78□□□□□ -2.28
VCPP55072 Y_RNA.217-201ENST00000364214 105 ntBASIC0.78□□□□□ -2.28
VCPP55072 MIR570-201ENST00000384917 97 ntBASIC0.78□□□□□ -2.28
VCPP55072 MIR1302-7-201ENST00000408841 72 ntBASIC0.78□□□□□ -2.28
VCPP55072 AL731563.1-201ENST00000442202 214 ntBASIC0.78□□□□□ -2.28
VCPP55072 Y_RNA.641-201ENST00000459414 105 ntBASIC0.78□□□□□ -2.28
VCPP55072 RNU7-181P-201ENST00000517234 74 ntBASIC0.78□□□□□ -2.28
VCPP55072 AC004812.1-201ENST00000540773 146 ntBASIC0.78□□□□□ -2.28
VCPP55072 AC023827.1-201ENST00000569247 97 ntBASIC0.78□□□□□ -2.28
VCPP55072 MIR4724-201ENST00000579485 89 ntBASIC0.78□□□□□ -2.28
VCPP55072 AC131055.1-201ENST00000584626 316 ntBASIC0.78□□□□□ -2.28
VCPP55072 AL021707.8-201ENST00000609428 183 ntBASIC0.78□□□□□ -2.28
VCPP55072 uc_338.4-201ENST00000616635 176 ntBASIC0.78□□□□□ -2.28
VCPP55072 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
VCPP55072 MIR367-201ENST00000362299 68 ntBASIC0.77□□□□□ -2.29
VCPP55072 Y_RNA.293-201ENST00000364908 93 ntBASIC0.77□□□□□ -2.29
VCPP55072 RNU6-639P-201ENST00000384074 107 ntBASIC0.77□□□□□ -2.29
VCPP55072 AL392103.1-201ENST00000447000 198 ntBASIC0.77□□□□□ -2.29
VCPP55072 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.77□□□□□ -2.29
VCPP55072 RNU4-57P-201ENST00000515980 135 ntBASIC0.77□□□□□ -2.29
VCPP55072 RNU7-149P-201ENST00000516739 59 ntBASIC0.77□□□□□ -2.29
VCPP55072 AC109810.1-201ENST00000534066 224 ntBASIC0.77□□□□□ -2.29
VCPP55072 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.77□□□□□ -2.29
VCPP55072 AC044792.1-201ENST00000593294 196 ntBASIC0.77□□□□□ -2.29
VCPP55072 AC243829.3-201ENST00000622177 108 ntBASIC0.77□□□□□ -2.29
VCPP55072 snoU18.1-201ENST00000629629 71 ntBASIC0.77□□□□□ -2.29
VCPP55072 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.76□□□□□ -2.29
VCPP55072 RNA5SP347-201ENST00000362445 119 ntBASIC0.76□□□□□ -2.29
VCPP55072 SNORA1.2-201ENST00000365189 134 ntBASIC0.76□□□□□ -2.29
VCPP55072 Y_RNA.370-201ENST00000365589 108 ntBASIC0.76□□□□□ -2.29
VCPP55072 RNU6-1227P-201ENST00000383981 107 ntBASIC0.76□□□□□ -2.29
VCPP55072 Y_RNA.518-201ENST00000384552 113 ntBASIC0.76□□□□□ -2.29
VCPP55072 Y_RNA.537-201ENST00000384626 109 ntBASIC0.76□□□□□ -2.29
VCPP55072 MIR605-201ENST00000385078 83 ntBASIC0.76□□□□□ -2.29
VCPP55072 MIR1265-201ENST00000408444 86 ntBASIC0.76□□□□□ -2.29
VCPP55072 FABP5P4-201ENST00000437203 171 ntBASIC0.76□□□□□ -2.29
VCPP55072 MTND5P22-201ENST00000458380 195 ntBASIC0.76□□□□□ -2.29
VCPP55072 AL049861.1-201ENST00000603130 150 ntBASIC0.76□□□□□ -2.29
VCPP55072 AL008718.3-201ENST00000610217 321 ntBASIC0.76□□□□□ -2.29
VCPP55072 UBE2WP1-201ENST00000362030 340 ntBASIC0.75□□□□□ -2.29
VCPP55072 Y_RNA.11-201ENST00000362375 109 ntBASIC0.75□□□□□ -2.29
VCPP55072 RNU6-1138P-201ENST00000365359 106 ntBASIC0.75□□□□□ -2.29
VCPP55072 SNORA51.10-201ENST00000384418 136 ntBASIC0.75□□□□□ -2.29
VCPP55072 SERF1AP1-201ENST00000514575 187 ntBASIC0.75□□□□□ -2.29
VCPP55072 RNU6-1338P-201ENST00000516328 91 ntBASIC0.75□□□□□ -2.29
VCPP55072 RNA5SP255-201ENST00000516370 107 ntBASIC0.75□□□□□ -2.29
VCPP55072 RNU7-25P-201ENST00000516544 62 ntBASIC0.75□□□□□ -2.29
VCPP55072 RNU6-1153P-201ENST00000516760 105 ntBASIC0.75□□□□□ -2.29
VCPP55072 Y_RNA.547-201ENST00000384654 119 ntBASIC0.74□□□□□ -2.29
VCPP55072 MIR526A2-201ENST00000390198 65 ntBASIC0.74□□□□□ -2.29
VCPP55072 RNU6-1203P-201ENST00000410703 110 ntBASIC0.74□□□□□ -2.29
VCPP55072 AC113618.1-201ENST00000416747 285 ntBASIC0.74□□□□□ -2.29
VCPP55072 SCARNA24.2-201ENST00000516968 130 ntBASIC0.74□□□□□ -2.29
VCPP55072 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.74□□□□□ -2.29
VCPP55072 MIR4791-201ENST00000607666 84 ntBASIC0.74□□□□□ -2.29
VCPP55072 MIR6516-201ENST00000630554 81 ntBASIC0.74□□□□□ -2.29
VCPP55072 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.74□□□□□ -2.29
VCPP55072 RNU6-654P-201ENST00000364373 107 ntBASIC0.73□□□□□ -2.29
VCPP55072 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.73□□□□□ -2.29
VCPP55072 SNORD111-201ENST00000408139 94 ntBASIC0.73□□□□□ -2.29
VCPP55072 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
VCPP55072 MIR548O-201ENST00000408583 114 ntBASIC0.73□□□□□ -2.29
VCPP55072 RNU6-847P-201ENST00000411115 108 ntBASIC0.73□□□□□ -2.29
VCPP55072 RPS26P5-201ENST00000418544 335 ntBASIC0.73□□□□□ -2.29
VCPP55072 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.73□□□□□ -2.29
VCPP55072 MTCO2P24-201ENST00000515611 426 ntBASIC0.73□□□□□ -2.29
VCPP55072 RNU2-13P-201ENST00000515909 113 ntBASIC0.73□□□□□ -2.29
VCPP55072 SCARNA8-201ENST00000515924 131 ntBASIC0.73□□□□□ -2.29
VCPP55072 Y_RNA.666-201ENST00000516187 112 ntBASIC0.73□□□□□ -2.29
VCPP55072 MIR5688-201ENST00000580619 83 ntBASIC0.73□□□□□ -2.29
VCPP55072 Y_RNA.802-201ENST00000614892 130 ntBASIC0.73□□□□□ -2.29
VCPP55072 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.73□□□□□ -2.29
VCPP55072 MTND1P7-201ENST00000632801 297 ntBASIC0.73□□□□□ -2.29
VCPP55072 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.72□□□□□ -2.29
VCPP55072 RNU4-10P-201ENST00000364383 140 ntBASIC0.72□□□□□ -2.29
VCPP55072 SNORD113.3-201ENST00000364630 78 ntBASIC0.72□□□□□ -2.29
VCPP55072 MTND5P15-201ENST00000434246 349 ntBASIC0.72□□□□□ -2.29
VCPP55072 SNORD77.4-201ENST00000516158 81 ntBASIC0.72□□□□□ -2.29
VCPP55072 MIR2115-201ENST00000516657 100 ntBASIC0.72□□□□□ -2.29
VCPP55072 RNU6-570P-201ENST00000517051 105 ntBASIC0.72□□□□□ -2.29
VCPP55072 MIR4662B-201ENST00000579498 81 ntBASIC0.72□□□□□ -2.29
VCPP55072 MIR548AO-201ENST00000579992 96 ntBASIC0.72□□□□□ -2.29
VCPP55072 AC006006.1-201ENST00000603082 144 ntBASIC0.72□□□□□ -2.29
VCPP55072 AC243994.1-201ENST00000618627 109 ntBASIC0.72□□□□□ -2.29
VCPP55072 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.72□□□□□ -2.29
VCPP55072 Y_RNA.275-201ENST00000364726 110 ntBASIC0.71□□□□□ -2.3
VCPP55072 RNU6-396P-201ENST00000365369 105 ntBASIC0.71□□□□□ -2.3
VCPP55072 RNU6-211P-201ENST00000384047 107 ntBASIC0.71□□□□□ -2.3
VCPP55072 Y_RNA.486-201ENST00000384398 107 ntBASIC0.71□□□□□ -2.3
VCPP55072 RNU6-1289P-201ENST00000384431 106 ntBASIC0.71□□□□□ -2.3
VCPP55072 RNU6-1109P-201ENST00000391187 107 ntBASIC0.71□□□□□ -2.3
VCPP55072 Y_RNA.587-201ENST00000391210 103 ntBASIC0.71□□□□□ -2.3
VCPP55072 RNU6-613P-201ENST00000410412 108 ntBASIC0.71□□□□□ -2.3
VCPP55072 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.71□□□□□ -2.3
VCPP55072 AC012433.1-201ENST00000588916 398 ntBASIC0.71□□□□□ -2.3
VCPP55072 RNU6-94P-201ENST00000607728 107 ntBASIC0.71□□□□□ -2.3
VCPP55072 Y_RNA.24-201ENST00000362508 103 ntBASIC0.7□□□□□ -2.3
VCPP55072 RNA5SP499-201ENST00000363982 119 ntBASIC0.7□□□□□ -2.3
VCPP55072 SNORA8.3-201ENST00000384679 139 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms