Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.23□□□□□ -2.21
LIMK2P53671 AC114811.1-201ENST00000507207 168 ntBASIC1.23□□□□□ -2.21
LIMK2P53671 RNA5SP153-201ENST00000516498 76 ntBASIC1.23□□□□□ -2.21
LIMK2P53671 RNU6-197P-201ENST00000516680 100 ntBASIC1.23□□□□□ -2.21
LIMK2P53671 AL512310.8-201ENST00000550183 120 ntBASIC1.23□□□□□ -2.21
LIMK2P53671 AC097639.2-201ENST00000603159 172 ntBASIC1.23□□□□□ -2.21
LIMK2P53671 AC120024.3-201ENST00000603167 156 ntBASIC1.23□□□□□ -2.21
LIMK2P53671 SNORD3E-202ENST00000627253 216 ntBASIC1.23□□□□□ -2.21
LIMK2P53671 RNU6-1084P-201ENST00000362498 107 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 Y_RNA.116-201ENST00000363292 103 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 Y_RNA.272-201ENST00000364696 102 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 Y_RNA.634-201ENST00000364811 113 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 snoU2-30.1-201ENST00000365012 70 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 Y_RNA.357-201ENST00000365487 109 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 MIR660-201ENST00000385235 97 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 RNU6-239P-201ENST00000390990 99 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 AC006461.1-201ENST00000412637 326 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 SNRPGP14-201ENST00000435400 219 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 CYCTP-201ENST00000504253 315 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 RNU7-121P-201ENST00000516604 62 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 MIR3144-201ENST00000579460 79 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 MIR4662B-201ENST00000579498 81 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 AC027279.3-201ENST00000625055 122 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 AC021753.1-201ENST00000635724 168 ntBASIC1.22□□□□□ -2.21
LIMK2P53671 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
LIMK2P53671 Y_RNA.66-201ENST00000362862 102 ntBASIC1.21□□□□□ -2.22
LIMK2P53671 SNORD14E-201ENST00000364009 85 ntBASIC1.21□□□□□ -2.22
LIMK2P53671 RNU6-1130P-201ENST00000365434 107 ntBASIC1.21□□□□□ -2.22
LIMK2P53671 Y_RNA.580-201ENST00000391004 95 ntBASIC1.21□□□□□ -2.22
LIMK2P53671 RNU2-70P-201ENST00000410718 179 ntBASIC1.21□□□□□ -2.22
LIMK2P53671 AC107027.2-201ENST00000512197 115 ntBASIC1.21□□□□□ -2.22
LIMK2P53671 MTND5P41-201ENST00000517498 206 ntBASIC1.21□□□□□ -2.22
LIMK2P53671 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.21□□□□□ -2.22
LIMK2P53671 AL442644.1-201ENST00000454390 3105 ntBASIC1.21□□□□□ -2.22
LIMK2P53671 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
LIMK2P53671 Y_RNA.170-201ENST00000363746 110 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 Y_RNA.191-201ENST00000363972 113 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 RNU6-268P-201ENST00000364174 107 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 Y_RNA.224-201ENST00000364308 111 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 Y_RNA.336-201ENST00000365307 109 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 Y_RNA.398-201ENST00000383952 99 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 RNU6-163P-201ENST00000384396 106 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 Y_RNA.508-201ENST00000384502 114 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 MIR518E-201ENST00000385252 88 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 SNORA79-201ENST00000408376 140 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 AC093850.1-201ENST00000454121 251 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 RNU7-12P-201ENST00000516030 62 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 Y_RNA.666-201ENST00000516187 112 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 RNU6-126P-201ENST00000516685 103 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 RNU6-365P-201ENST00000517113 106 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 CYP3A52P-201ENST00000563326 91 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 MIR3664-201ENST00000579074 99 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 MIR378D2-201ENST00000580636 98 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 AC006441.5-201ENST00000612680 209 ntBASIC1.2□□□□□ -2.22
LIMK2P53671 Y_RNA.8-201ENST00000362353 102 ntBASIC1.19□□□□□ -2.22
LIMK2P53671 RNU6-833P-201ENST00000363486 107 ntBASIC1.19□□□□□ -2.22
LIMK2P53671 RNU6-978P-201ENST00000364371 103 ntBASIC1.19□□□□□ -2.22
LIMK2P53671 Y_RNA.242-201ENST00000364473 110 ntBASIC1.19□□□□□ -2.22
LIMK2P53671 Y_RNA.355-201ENST00000365462 98 ntBASIC1.19□□□□□ -2.22
LIMK2P53671 SNORD24-201ENST00000383884 75 ntBASIC1.19□□□□□ -2.22
LIMK2P53671 RNU6-442P-201ENST00000383968 104 ntBASIC1.19□□□□□ -2.22
LIMK2P53671 SNORD61-201ENST00000384252 73 ntBASIC1.19□□□□□ -2.22
LIMK2P53671 MIR802-201ENST00000390235 94 ntBASIC1.19□□□□□ -2.22
LIMK2P53671 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
LIMK2P53671 MIR891A-201ENST00000401237 79 ntBASIC1.19□□□□□ -2.22
LIMK2P53671 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.19□□□□□ -2.22
LIMK2P53671 HMGN2P32-201ENST00000444648 269 ntBASIC1.19□□□□□ -2.22
LIMK2P53671 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.19□□□□□ -2.22
LIMK2P53671 AC007751.1-201ENST00000529260 376 ntBASIC1.19□□□□□ -2.22
LIMK2P53671 MIR4778-201ENST00000577635 80 ntBASIC1.19□□□□□ -2.22
LIMK2P53671 MIR3658-201ENST00000636291 56 ntBASIC1.19□□□□□ -2.22
LIMK2P53671 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
LIMK2P53671 RNU6-818P-201ENST00000364837 108 ntBASIC1.18□□□□□ -2.22
LIMK2P53671 Y_RNA.337-201ENST00000365312 102 ntBASIC1.18□□□□□ -2.22
LIMK2P53671 RNU6-449P-201ENST00000383914 107 ntBASIC1.18□□□□□ -2.22
LIMK2P53671 SNORD116-18-201ENST00000383961 92 ntBASIC1.18□□□□□ -2.22
LIMK2P53671 RNU6-768P-201ENST00000384683 107 ntBASIC1.18□□□□□ -2.22
LIMK2P53671 MIR548A2-201ENST00000384956 97 ntBASIC1.18□□□□□ -2.22
LIMK2P53671 SNORA26-201ENST00000391286 122 ntBASIC1.18□□□□□ -2.22
LIMK2P53671 SUMO1P3-201ENST00000439961 304 ntBASIC1.18□□□□□ -2.22
LIMK2P53671 RNU7-200P-201ENST00000516105 62 ntBASIC1.18□□□□□ -2.22
LIMK2P53671 RNU6-504P-201ENST00000516568 104 ntBASIC1.18□□□□□ -2.22
LIMK2P53671 MIR4452-201ENST00000583004 71 ntBASIC1.18□□□□□ -2.22
LIMK2P53671 RNU6-888P-201ENST00000363010 101 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 RNU6-597P-201ENST00000365620 102 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 Y_RNA.393-201ENST00000383936 102 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 Y_RNA.506-201ENST00000384494 102 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 Y_RNA.521-201ENST00000384560 114 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 MIR518F-201ENST00000384973 87 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 AL591704.2-201ENST00000421658 181 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 AC092991.1-201ENST00000477176 376 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 SNORD116-25-201ENST00000516517 92 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 RNU7-25P-201ENST00000516544 62 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 RN7SKP88-201ENST00000516847 250 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 RNU6-1270P-201ENST00000517128 108 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 AL513534.2-201ENST00000603836 250 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 7SK.8-201ENST00000612110 250 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 7SK.11-201ENST00000615477 250 ntBASIC1.17□□□□□ -2.22
LIMK2P53671 MIR8065-201ENST00000620577 100 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms