Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
PDX1P52945 Y_RNA.354-201ENST00000365448 111 ntBASIC1.11□□□□□ -2.23
PDX1P52945 MIR518F-201ENST00000384973 87 ntBASIC1.11□□□□□ -2.23
PDX1P52945 MIR222-201ENST00000384992 110 ntBASIC1.11□□□□□ -2.23
PDX1P52945 U8.17-201ENST00000391292 132 ntBASIC1.11□□□□□ -2.23
PDX1P52945 RNU6-493P-201ENST00000391321 108 ntBASIC1.11□□□□□ -2.23
PDX1P52945 AL606845.1-201ENST00000404881 255 ntBASIC1.11□□□□□ -2.23
PDX1P52945 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.11□□□□□ -2.23
PDX1P52945 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.11□□□□□ -2.23
PDX1P52945 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.11□□□□□ -2.23
PDX1P52945 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.11□□□□□ -2.23
PDX1P52945 RNU6-561P-201ENST00000516222 102 ntBASIC1.11□□□□□ -2.23
PDX1P52945 MIR4662B-201ENST00000579498 81 ntBASIC1.11□□□□□ -2.23
PDX1P52945 MIR6734-201ENST00000621166 68 ntBASIC1.11□□□□□ -2.23
PDX1P52945 AC008133.2-201ENST00000624540 351 ntBASIC1.11□□□□□ -2.23
PDX1P52945 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.11□□□□□ -2.23
PDX1P52945 Y_RNA.66-201ENST00000362862 102 ntBASIC1.1□□□□□ -2.23
PDX1P52945 SNORD45.3-201ENST00000363836 72 ntBASIC1.1□□□□□ -2.23
PDX1P52945 RNY1-201ENST00000364228 113 ntBASIC1.1□□□□□ -2.23
PDX1P52945 Y_RNA.242-201ENST00000364473 110 ntBASIC1.1□□□□□ -2.23
PDX1P52945 Y_RNA.308-201ENST00000365043 101 ntBASIC1.1□□□□□ -2.23
PDX1P52945 SNORA25-201ENST00000384384 134 ntBASIC1.1□□□□□ -2.23
PDX1P52945 SNORA75.2-201ENST00000391138 150 ntBASIC1.1□□□□□ -2.23
PDX1P52945 SNORA75.3-201ENST00000391231 150 ntBASIC1.1□□□□□ -2.23
PDX1P52945 RPS26P48-201ENST00000491713 339 ntBASIC1.1□□□□□ -2.23
PDX1P52945 RNU6-1270P-201ENST00000517128 108 ntBASIC1.1□□□□□ -2.23
PDX1P52945 AC027335.2-201ENST00000624030 375 ntBASIC1.1□□□□□ -2.23
PDX1P52945 RNU6-923P-201ENST00000364753 107 ntBASIC1.09□□□□□ -2.23
PDX1P52945 SNORD61-201ENST00000384252 73 ntBASIC1.09□□□□□ -2.23
PDX1P52945 Y_RNA.478-201ENST00000384358 107 ntBASIC1.09□□□□□ -2.23
PDX1P52945 RNU6-1228P-201ENST00000391014 107 ntBASIC1.09□□□□□ -2.23
PDX1P52945 Y_RNA.626-201ENST00000411288 95 ntBASIC1.09□□□□□ -2.23
PDX1P52945 SNORA31.4-201ENST00000516049 129 ntBASIC1.09□□□□□ -2.23
PDX1P52945 AP003716.2-201ENST00000528260 108 ntBASIC1.09□□□□□ -2.23
PDX1P52945 AC004817.2-201ENST00000561794 651 ntBASIC1.09□□□□□ -2.23
PDX1P52945 RNA5SP48-201ENST00000363969 126 ntBASIC1.08□□□□□ -2.24
PDX1P52945 Y_RNA.634-201ENST00000364811 113 ntBASIC1.08□□□□□ -2.24
PDX1P52945 Y_RNA.432-201ENST00000384087 111 ntBASIC1.08□□□□□ -2.24
PDX1P52945 Y_RNA.494-201ENST00000384432 111 ntBASIC1.08□□□□□ -2.24
PDX1P52945 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
PDX1P52945 MIR1185-1-201ENST00000408598 86 ntBASIC1.08□□□□□ -2.24
PDX1P52945 SNRPGP8-201ENST00000454064 226 ntBASIC1.08□□□□□ -2.24
PDX1P52945 SNORD79.1-201ENST00000516069 84 ntBASIC1.08□□□□□ -2.24
PDX1P52945 RNU6-1299P-201ENST00000516316 100 ntBASIC1.08□□□□□ -2.24
PDX1P52945 MIR4308-201ENST00000580634 81 ntBASIC1.08□□□□□ -2.24
PDX1P52945 MIR151B-201ENST00000584249 96 ntBASIC1.08□□□□□ -2.24
PDX1P52945 MIR6788-201ENST00000618842 66 ntBASIC1.08□□□□□ -2.24
PDX1P52945 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
PDX1P52945 RNA5SP264-201ENST00000363115 107 ntBASIC1.07□□□□□ -2.24
PDX1P52945 SNORA20.1-201ENST00000364790 130 ntBASIC1.07□□□□□ -2.24
PDX1P52945 SNORD24-201ENST00000383884 75 ntBASIC1.07□□□□□ -2.24
PDX1P52945 RNY3P5-201ENST00000384127 102 ntBASIC1.07□□□□□ -2.24
PDX1P52945 MIR7-2-201ENST00000384970 110 ntBASIC1.07□□□□□ -2.24
PDX1P52945 MIR1302-7-201ENST00000408841 72 ntBASIC1.07□□□□□ -2.24
PDX1P52945 RNU6-938P-201ENST00000411285 103 ntBASIC1.07□□□□□ -2.24
PDX1P52945 RN7SKP179-201ENST00000516126 217 ntBASIC1.07□□□□□ -2.24
PDX1P52945 RNU6-693P-201ENST00000516134 107 ntBASIC1.07□□□□□ -2.24
PDX1P52945 RNU4-71P-201ENST00000516258 113 ntBASIC1.07□□□□□ -2.24
PDX1P52945 SNORA70.22-201ENST00000517160 124 ntBASIC1.07□□□□□ -2.24
PDX1P52945 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
PDX1P52945 AC097639.2-201ENST00000603159 172 ntBASIC1.07□□□□□ -2.24
PDX1P52945 PRELID3BP2-201ENST00000605362 201 ntBASIC1.07□□□□□ -2.24
PDX1P52945 MIR4251-201ENST00000635819 61 ntBASIC1.07□□□□□ -2.24
PDX1P52945 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
PDX1P52945 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
PDX1P52945 MIR103A2-201ENST00000362154 78 ntBASIC1.06□□□□□ -2.24
PDX1P52945 RNU6-888P-201ENST00000363010 101 ntBASIC1.06□□□□□ -2.24
PDX1P52945 SNORD115-28-201ENST00000363931 81 ntBASIC1.06□□□□□ -2.24
PDX1P52945 Y_RNA.199-201ENST00000364014 102 ntBASIC1.06□□□□□ -2.24
PDX1P52945 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
PDX1P52945 MIR548J-201ENST00000408833 112 ntBASIC1.06□□□□□ -2.24
PDX1P52945 RNU2-70P-201ENST00000410718 179 ntBASIC1.06□□□□□ -2.24
PDX1P52945 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
PDX1P52945 AC087343.1-201ENST00000477341 475 ntBASIC1.06□□□□□ -2.24
PDX1P52945 RNU2-13P-201ENST00000515909 113 ntBASIC1.06□□□□□ -2.24
PDX1P52945 RNU6-365P-201ENST00000517113 106 ntBASIC1.06□□□□□ -2.24
PDX1P52945 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
PDX1P52945 AC109810.1-201ENST00000534066 224 ntBASIC1.06□□□□□ -2.24
PDX1P52945 RNU2-4P-201ENST00000606190 192 ntBASIC1.06□□□□□ -2.24
PDX1P52945 PVT1_3.1-201ENST00000620853 95 ntBASIC1.06□□□□□ -2.24
PDX1P52945 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.06□□□□□ -2.24
PDX1P52945 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
PDX1P52945 Y_RNA.23-201ENST00000362496 106 ntBASIC1.05□□□□□ -2.24
PDX1P52945 Y_RNA.370-201ENST00000365589 108 ntBASIC1.05□□□□□ -2.24
PDX1P52945 RNU6-939P-201ENST00000384634 107 ntBASIC1.05□□□□□ -2.24
PDX1P52945 RNU2-55P-201ENST00000411146 174 ntBASIC1.05□□□□□ -2.24
PDX1P52945 SNORD36C-201ENST00000516733 66 ntBASIC1.05□□□□□ -2.24
PDX1P52945 RNA5SP480-201ENST00000516840 109 ntBASIC1.05□□□□□ -2.24
PDX1P52945 RNU6-1223P-201ENST00000517124 104 ntBASIC1.05□□□□□ -2.24
PDX1P52945 MIR4791-201ENST00000607666 84 ntBASIC1.05□□□□□ -2.24
PDX1P52945 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
PDX1P52945 MIR373-201ENST00000362273 69 ntBASIC1.04□□□□□ -2.24
PDX1P52945 Y_RNA.37-201ENST00000362606 108 ntBASIC1.04□□□□□ -2.24
PDX1P52945 SNORA51.10-201ENST00000384418 136 ntBASIC1.04□□□□□ -2.24
PDX1P52945 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
PDX1P52945 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.04□□□□□ -2.24
PDX1P52945 RNU7-21P-201ENST00000459430 62 ntBASIC1.04□□□□□ -2.24
PDX1P52945 RNU7-40P-201ENST00000516397 64 ntBASIC1.04□□□□□ -2.24
PDX1P52945 RNA5SP153-201ENST00000516498 76 ntBASIC1.04□□□□□ -2.24
PDX1P52945 RNU6-197P-201ENST00000516680 100 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 280.8 ms