Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 MIR4791-201ENST00000607666 84 ntBASIC0.67□□□□□ -2.3
GPC3P51654 SNORD115-34-201ENST00000362441 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-12-201ENST00000362583 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-29-201ENST00000362834 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-9-201ENST00000362912 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-21-201ENST00000362963 81 ntBASIC0.66□□□□□ -2.3
GPC3P51654 Y_RNA.84-201ENST00000363011 104 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-14-201ENST00000363090 81 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-13-201ENST00000363358 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-41-201ENST00000363608 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-11-201ENST00000363616 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-5-201ENST00000363633 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-39-201ENST00000363694 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-4-201ENST00000363810 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-16-201ENST00000363887 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-6-201ENST00000363942 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-42-201ENST00000364273 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-15-201ENST00000364809 81 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-1-201ENST00000364961 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-26-201ENST00000365067 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-10-201ENST00000365073 81 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-43-201ENST00000365503 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-36-201ENST00000365629 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 Y_RNA.376-201ENST00000365638 108 ntBASIC0.66□□□□□ -2.3
GPC3P51654 RNU6-713P-201ENST00000384761 107 ntBASIC0.66□□□□□ -2.3
GPC3P51654 RPL21P38-201ENST00000418090 167 ntBASIC0.66□□□□□ -2.3
GPC3P51654 MTCYBP6-201ENST00000441810 138 ntBASIC0.66□□□□□ -2.3
GPC3P51654 RNU6-1338P-201ENST00000516328 91 ntBASIC0.66□□□□□ -2.3
GPC3P51654 RNA5SP121-201ENST00000516537 101 ntBASIC0.66□□□□□ -2.3
GPC3P51654 RNU7-181P-201ENST00000517234 74 ntBASIC0.66□□□□□ -2.3
GPC3P51654 SNORD115-40-201ENST00000606510 82 ntBASIC0.66□□□□□ -2.3
GPC3P51654 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.66□□□□□ -2.3
GPC3P51654 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.65□□□□□ -2.31
GPC3P51654 MIR377-201ENST00000362145 69 ntBASIC0.65□□□□□ -2.31
GPC3P51654 RNA5SP499-201ENST00000363982 119 ntBASIC0.65□□□□□ -2.31
GPC3P51654 RNU6-662P-201ENST00000384253 104 ntBASIC0.65□□□□□ -2.31
GPC3P51654 Y_RNA.547-201ENST00000384654 119 ntBASIC0.65□□□□□ -2.31
GPC3P51654 MIR215-201ENST00000384858 110 ntBASIC0.65□□□□□ -2.31
GPC3P51654 SNORD89-201ENST00000390981 114 ntBASIC0.65□□□□□ -2.31
GPC3P51654 MIR936-201ENST00000401264 98 ntBASIC0.65□□□□□ -2.31
GPC3P51654 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.65□□□□□ -2.31
GPC3P51654 RNU6-383P-201ENST00000410864 94 ntBASIC0.65□□□□□ -2.31
GPC3P51654 RNU2-55P-201ENST00000411146 174 ntBASIC0.65□□□□□ -2.31
GPC3P51654 snoU13.16-201ENST00000459350 104 ntBASIC0.65□□□□□ -2.31
GPC3P51654 MTCO2P24-201ENST00000515611 426 ntBASIC0.65□□□□□ -2.31
GPC3P51654 RNU2-13P-201ENST00000515909 113 ntBASIC0.65□□□□□ -2.31
GPC3P51654 RNA5SP480-201ENST00000516840 109 ntBASIC0.65□□□□□ -2.31
GPC3P51654 AC036111.3-201ENST00000526389 112 ntBASIC0.65□□□□□ -2.31
GPC3P51654 AL049861.1-201ENST00000603130 150 ntBASIC0.65□□□□□ -2.31
GPC3P51654 AP000753.3-201ENST00000604083 169 ntBASIC0.65□□□□□ -2.31
GPC3P51654 AC243994.1-201ENST00000618627 109 ntBASIC0.65□□□□□ -2.31
GPC3P51654 7SK.10-201ENST00000621414 298 ntBASIC0.65□□□□□ -2.31
GPC3P51654 snoU18.1-201ENST00000629629 71 ntBASIC0.65□□□□□ -2.31
GPC3P51654 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
GPC3P51654 RNA5SP347-201ENST00000362445 119 ntBASIC0.64□□□□□ -2.31
GPC3P51654 Y_RNA.64-201ENST00000362845 102 ntBASIC0.64□□□□□ -2.31
GPC3P51654 Y_RNA.153-201ENST00000363615 91 ntBASIC0.64□□□□□ -2.31
GPC3P51654 Y_RNA.168-201ENST00000363740 102 ntBASIC0.64□□□□□ -2.31
GPC3P51654 SNORD115-28-201ENST00000363931 81 ntBASIC0.64□□□□□ -2.31
GPC3P51654 Y_RNA.275-201ENST00000364726 110 ntBASIC0.64□□□□□ -2.31
GPC3P51654 SNORD24-201ENST00000383884 75 ntBASIC0.64□□□□□ -2.31
GPC3P51654 RNY3P5-201ENST00000384127 102 ntBASIC0.64□□□□□ -2.31
GPC3P51654 RNU6-1203P-201ENST00000410703 110 ntBASIC0.64□□□□□ -2.31
GPC3P51654 RNU7-25P-201ENST00000516544 62 ntBASIC0.64□□□□□ -2.31
GPC3P51654 RNU6-365P-201ENST00000517113 106 ntBASIC0.64□□□□□ -2.31
GPC3P51654 AL442663.2-201ENST00000554385 511 ntBASIC0.64□□□□□ -2.31
GPC3P51654 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
GPC3P51654 Z83818.1-201ENST00000603584 150 ntBASIC0.64□□□□□ -2.31
GPC3P51654 MIR6516-201ENST00000630554 81 ntBASIC0.64□□□□□ -2.31
GPC3P51654 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.63□□□□□ -2.31
GPC3P51654 Y_RNA.216-201ENST00000364205 93 ntBASIC0.63□□□□□ -2.31
GPC3P51654 Y_RNA.393-201ENST00000383936 102 ntBASIC0.63□□□□□ -2.31
GPC3P51654 SNORA24-201ENST00000384096 131 ntBASIC0.63□□□□□ -2.31
GPC3P51654 Y_RNA.466-201ENST00000384294 113 ntBASIC0.63□□□□□ -2.31
GPC3P51654 SNORD99-201ENST00000408612 74 ntBASIC0.63□□□□□ -2.31
GPC3P51654 MIR1302-7-201ENST00000408841 72 ntBASIC0.63□□□□□ -2.31
GPC3P51654 AC092628.1-201ENST00000436250 252 ntBASIC0.63□□□□□ -2.31
GPC3P51654 RNU6-504P-201ENST00000516568 104 ntBASIC0.63□□□□□ -2.31
GPC3P51654 MIR4264-201ENST00000583520 66 ntBASIC0.63□□□□□ -2.31
GPC3P51654 MTND1P7-201ENST00000632801 297 ntBASIC0.63□□□□□ -2.31
GPC3P51654 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
GPC3P51654 MIR335-201ENST00000362173 94 ntBASIC0.62□□□□□ -2.31
GPC3P51654 Y_RNA.44-201ENST00000362676 108 ntBASIC0.62□□□□□ -2.31
GPC3P51654 Y_RNA.241-201ENST00000364470 117 ntBASIC0.62□□□□□ -2.31
GPC3P51654 SNORA63C-201ENST00000364578 129 ntBASIC0.62□□□□□ -2.31
GPC3P51654 RNU6-806P-201ENST00000365147 105 ntBASIC0.62□□□□□ -2.31
GPC3P51654 RNU6-211P-201ENST00000384047 107 ntBASIC0.62□□□□□ -2.31
GPC3P51654 SNORA2B-201ENST00000384583 137 ntBASIC0.62□□□□□ -2.31
GPC3P51654 SNORA40.5-201ENST00000391061 128 ntBASIC0.62□□□□□ -2.31
GPC3P51654 RNU6-1109P-201ENST00000391187 107 ntBASIC0.62□□□□□ -2.31
GPC3P51654 Y_RNA.587-201ENST00000391210 103 ntBASIC0.62□□□□□ -2.31
GPC3P51654 TRBVB-201ENST00000477100 408 ntBASIC0.62□□□□□ -2.31
GPC3P51654 RNU7-53P-201ENST00000516705 60 ntBASIC0.62□□□□□ -2.31
GPC3P51654 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.62□□□□□ -2.31
GPC3P51654 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.62□□□□□ -2.31
GPC3P51654 AC006504.6-201ENST00000590142 199 ntBASIC0.62□□□□□ -2.31
GPC3P51654 AL008718.3-201ENST00000610217 321 ntBASIC0.62□□□□□ -2.31
GPC3P51654 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.62□□□□□ -2.31
GPC3P51654 MIR1-1-201ENST00000362147 71 ntBASIC0.61□□□□□ -2.31
GPC3P51654 RNU6-1289P-201ENST00000384431 106 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 328.6 ms