Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SNORD115-40-201ENST00000606510 82 ntBASIC0.34□□□□□ -2.36
CSNK1A1P48729 MIR8055-201ENST00000610739 97 ntBASIC0.34□□□□□ -2.36
CSNK1A1P48729 AC134878.1-201ENST00000619901 243 ntBASIC0.34□□□□□ -2.36
CSNK1A1P48729 MIR18A-201ENST00000362310 71 ntBASIC0.33□□□□□ -2.36
CSNK1A1P48729 Y_RNA.116-201ENST00000363292 103 ntBASIC0.33□□□□□ -2.36
CSNK1A1P48729 SNORD115-28-201ENST00000363931 81 ntBASIC0.33□□□□□ -2.36
CSNK1A1P48729 MIR140-201ENST00000385282 100 ntBASIC0.33□□□□□ -2.36
CSNK1A1P48729 MT-TD-201ENST00000387419 68 ntBASIC0.33□□□□□ -2.36
CSNK1A1P48729 Y_RNA.587-201ENST00000391210 103 ntBASIC0.33□□□□□ -2.36
CSNK1A1P48729 MIR1252-201ENST00000408861 65 ntBASIC0.33□□□□□ -2.36
CSNK1A1P48729 RNU6-1132P-201ENST00000459214 107 ntBASIC0.33□□□□□ -2.36
CSNK1A1P48729 SNORD77.4-201ENST00000516158 81 ntBASIC0.33□□□□□ -2.36
CSNK1A1P48729 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.33□□□□□ -2.36
CSNK1A1P48729 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.33□□□□□ -2.36
CSNK1A1P48729 MIR4676-201ENST00000583078 72 ntBASIC0.33□□□□□ -2.36
CSNK1A1P48729 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.33□□□□□ -2.36
CSNK1A1P48729 Y_RNA.14-201ENST00000362415 103 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 RNU6-1272P-201ENST00000362776 107 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 snoU2_19.2-201ENST00000363024 80 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 RNU6-662P-201ENST00000384253 104 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 Y_RNA.541-201ENST00000384640 113 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 MIR215-201ENST00000384858 110 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 MIR548A2-201ENST00000384956 97 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 AC087499.4-201ENST00000448505 178 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 RNU7-62P-201ENST00000458856 62 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 MTCO2P24-201ENST00000515611 426 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 SNORA18.4-201ENST00000516440 124 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.32□□□□□ -2.36
CSNK1A1P48729 MIR4724-201ENST00000579485 89 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 MIR3612-201ENST00000579753 87 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 SNORA4-201ENST00000584302 138 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 AL355297.3-201ENST00000604082 446 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 AP000942.4-201ENST00000604811 241 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 AC243829.6-201ENST00000612652 106 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 MIR6740-201ENST00000618268 113 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.32□□□□□ -2.36
CSNK1A1P48729 Y_RNA.37-201ENST00000362606 108 ntBASIC0.31□□□□□ -2.36
CSNK1A1P48729 RNU4-10P-201ENST00000364383 140 ntBASIC0.31□□□□□ -2.36
CSNK1A1P48729 RNU6-290P-201ENST00000365212 101 ntBASIC0.31□□□□□ -2.36
CSNK1A1P48729 Y_RNA.389-201ENST00000383924 113 ntBASIC0.31□□□□□ -2.36
CSNK1A1P48729 Y_RNA.394-201ENST00000383942 103 ntBASIC0.31□□□□□ -2.36
CSNK1A1P48729 RNU6-474P-201ENST00000384243 107 ntBASIC0.31□□□□□ -2.36
CSNK1A1P48729 MIR518F-201ENST00000384973 87 ntBASIC0.31□□□□□ -2.36
CSNK1A1P48729 SNORA40.5-201ENST00000391061 128 ntBASIC0.31□□□□□ -2.36
CSNK1A1P48729 ELOCP20-201ENST00000422460 345 ntBASIC0.31□□□□□ -2.36
CSNK1A1P48729 RNU7-73P-201ENST00000458743 63 ntBASIC0.31□□□□□ -2.36
CSNK1A1P48729 RNU2-31P-201ENST00000516954 155 ntBASIC0.31□□□□□ -2.36
CSNK1A1P48729 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.31□□□□□ -2.36
CSNK1A1P48729 AC022709.1-201ENST00000615967 87 ntBASIC0.31□□□□□ -2.36
CSNK1A1P48729 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 MIR367-201ENST00000362299 68 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 Y_RNA.28-201ENST00000362554 111 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 Y_RNA.214-201ENST00000364201 112 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 Y_RNA.217-201ENST00000364214 105 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 Y_RNA.293-201ENST00000364908 93 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 RNU6-326P-201ENST00000365480 107 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 SNORD61-201ENST00000384252 73 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 Y_RNA.509-201ENST00000384506 99 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 SNORD38B-201ENST00000384690 67 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 MIR518E-201ENST00000385252 88 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 MIR936-201ENST00000401264 98 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 RNU6-101P-201ENST00000410323 104 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.3□□□□□ -2.36
CSNK1A1P48729 Y_RNA.641-201ENST00000459414 105 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 RNU6-693P-201ENST00000516134 107 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 MIR4711-201ENST00000578274 70 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 AL008718.3-201ENST00000610217 321 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 SNORD38B-202ENST00000625943 69 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 snoU18.1-201ENST00000629629 71 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 Z97988.1-201ENST00000637697 135 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
CSNK1A1P48729 MTND4P29-201ENST00000503122 1372 ntBASIC0.3□□□□□ -2.36
CSNK1A1P48729 Y_RNA.26-201ENST00000362539 101 ntBASIC0.29□□□□□ -2.36
CSNK1A1P48729 RNU6-770P-201ENST00000363929 105 ntBASIC0.29□□□□□ -2.36
CSNK1A1P48729 RNU6-806P-201ENST00000365147 105 ntBASIC0.29□□□□□ -2.36
CSNK1A1P48729 Y_RNA.431-201ENST00000384086 102 ntBASIC0.29□□□□□ -2.36
CSNK1A1P48729 SNORA27-201ENST00000384323 126 ntBASIC0.29□□□□□ -2.36
CSNK1A1P48729 RNU6-342P-201ENST00000384521 104 ntBASIC0.29□□□□□ -2.36
CSNK1A1P48729 Y_RNA.572-201ENST00000384757 98 ntBASIC0.29□□□□□ -2.36
CSNK1A1P48729 RPL21P38-201ENST00000418090 167 ntBASIC0.29□□□□□ -2.36
CSNK1A1P48729 HMGN1P33-201ENST00000432945 451 ntBASIC0.29□□□□□ -2.36
CSNK1A1P48729 SNORA27.4-201ENST00000516650 95 ntBASIC0.29□□□□□ -2.36
CSNK1A1P48729 SNORD36C-201ENST00000516733 66 ntBASIC0.29□□□□□ -2.36
CSNK1A1P48729 MIR4662B-201ENST00000579498 81 ntBASIC0.29□□□□□ -2.36
CSNK1A1P48729 AL162730.1-201ENST00000605734 292 ntBASIC0.29□□□□□ -2.36
CSNK1A1P48729 AC010332.2-201ENST00000613083 1904 ntBASIC0.28□□□□□ -2.36
CSNK1A1P48729 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
CSNK1A1P48729 Y_RNA.354-201ENST00000365448 111 ntBASIC0.28□□□□□ -2.36
CSNK1A1P48729 RNU4-45P-201ENST00000365469 141 ntBASIC0.28□□□□□ -2.36
CSNK1A1P48729 Y_RNA.380-201ENST00000365663 111 ntBASIC0.28□□□□□ -2.36
CSNK1A1P48729 SNORD24-201ENST00000383884 75 ntBASIC0.28□□□□□ -2.36
CSNK1A1P48729 MIR526A2-201ENST00000390198 65 ntBASIC0.28□□□□□ -2.36
CSNK1A1P48729 RNU6-602P-201ENST00000411155 105 ntBASIC0.28□□□□□ -2.36
CSNK1A1P48729 MIR18B-201ENST00000454574 71 ntBASIC0.28□□□□□ -2.36
CSNK1A1P48729 Y_RNA.721-201ENST00000517207 102 ntBASIC0.28□□□□□ -2.36
CSNK1A1P48729 AC008608.1-201ENST00000603910 127 ntBASIC0.28□□□□□ -2.36
CSNK1A1P48729 SNORA25.1-201ENST00000362326 128 ntBASIC0.27□□□□□ -2.37
CSNK1A1P48729 Y_RNA.16-201ENST00000362421 102 ntBASIC0.27□□□□□ -2.37
CSNK1A1P48729 VTRNA1-3-201ENST00000365645 89 ntBASIC0.27□□□□□ -2.37
CSNK1A1P48729 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms