Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 MTATP6P21-201ENST00000440681 189 ntBASIC1.5□□□□□ -2.17
RFX2P48378 Y_RNA.651-201ENST00000459380 103 ntBASIC1.5□□□□□ -2.17
RFX2P48378 RNU6-917P-201ENST00000516294 104 ntBASIC1.5□□□□□ -2.17
RFX2P48378 AC090821.2-201ENST00000523552 176 ntBASIC1.5□□□□□ -2.17
RFX2P48378 MIR1273D-201ENST00000577266 86 ntBASIC1.5□□□□□ -2.17
RFX2P48378 MIR3121-201ENST00000579680 77 ntBASIC1.5□□□□□ -2.17
RFX2P48378 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.5□□□□□ -2.17
RFX2P48378 Y_RNA.114-201ENST00000363265 113 ntBASIC1.49□□□□□ -2.17
RFX2P48378 Y_RNA.351-201ENST00000365436 96 ntBASIC1.49□□□□□ -2.17
RFX2P48378 SNORA27-201ENST00000384323 126 ntBASIC1.49□□□□□ -2.17
RFX2P48378 SNORD28B-201ENST00000390993 75 ntBASIC1.49□□□□□ -2.17
RFX2P48378 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RFX2P48378 RNU7-107P-201ENST00000459121 61 ntBASIC1.49□□□□□ -2.17
RFX2P48378 SNORD123-201ENST00000459473 70 ntBASIC1.49□□□□□ -2.17
RFX2P48378 RPS26P48-201ENST00000491713 339 ntBASIC1.49□□□□□ -2.17
RFX2P48378 RNU6-62P-201ENST00000516526 102 ntBASIC1.49□□□□□ -2.17
RFX2P48378 SNORA77B-201ENST00000578179 125 ntBASIC1.49□□□□□ -2.17
RFX2P48378 AC103810.8-201ENST00000607347 118 ntBASIC1.49□□□□□ -2.17
RFX2P48378 RNU4-82P-201ENST00000362443 140 ntBASIC1.48□□□□□ -2.17
RFX2P48378 Y_RNA.370-201ENST00000365589 108 ntBASIC1.48□□□□□ -2.17
RFX2P48378 SNORD116-14-201ENST00000383894 92 ntBASIC1.48□□□□□ -2.17
RFX2P48378 SNORD116-17-201ENST00000383929 92 ntBASIC1.48□□□□□ -2.17
RFX2P48378 SNORD116-15-201ENST00000384445 92 ntBASIC1.48□□□□□ -2.17
RFX2P48378 RNU6-997P-201ENST00000384725 107 ntBASIC1.48□□□□□ -2.17
RFX2P48378 SNORD116-19-201ENST00000384729 92 ntBASIC1.48□□□□□ -2.17
RFX2P48378 MIR570-201ENST00000384917 97 ntBASIC1.48□□□□□ -2.17
RFX2P48378 MIR23A-201ENST00000385245 73 ntBASIC1.48□□□□□ -2.17
RFX2P48378 SNORA40.5-201ENST00000391061 128 ntBASIC1.48□□□□□ -2.17
RFX2P48378 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.48□□□□□ -2.17
RFX2P48378 RNU6-1333P-201ENST00000516162 93 ntBASIC1.48□□□□□ -2.17
RFX2P48378 RNU7-70P-201ENST00000516941 66 ntBASIC1.48□□□□□ -2.17
RFX2P48378 MIR548AR-201ENST00000582191 57 ntBASIC1.48□□□□□ -2.17
RFX2P48378 MIR4672-201ENST00000583126 81 ntBASIC1.48□□□□□ -2.17
RFX2P48378 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.48□□□□□ -2.17
RFX2P48378 MIR8074-201ENST00000615081 81 ntBASIC1.48□□□□□ -2.17
RFX2P48378 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RFX2P48378 SNORD115-34-201ENST00000362441 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-12-201ENST00000362583 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-29-201ENST00000362834 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-9-201ENST00000362912 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-21-201ENST00000362963 81 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-14-201ENST00000363090 81 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-13-201ENST00000363358 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 Y_RNA.127-201ENST00000363386 109 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-41-201ENST00000363608 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-11-201ENST00000363616 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-5-201ENST00000363633 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-39-201ENST00000363694 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-4-201ENST00000363810 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-16-201ENST00000363887 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-6-201ENST00000363942 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-42-201ENST00000364273 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-15-201ENST00000364809 81 ntBASIC1.47□□□□□ -2.17
RFX2P48378 Y_RNA.291-201ENST00000364886 113 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-1-201ENST00000364961 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-26-201ENST00000365067 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-10-201ENST00000365073 81 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-43-201ENST00000365503 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-36-201ENST00000365629 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 RNU6-80P-201ENST00000384195 107 ntBASIC1.47□□□□□ -2.17
RFX2P48378 Y_RNA.500-201ENST00000384466 111 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORA22C-201ENST00000384614 134 ntBASIC1.47□□□□□ -2.17
RFX2P48378 RNU6-1154P-201ENST00000391001 104 ntBASIC1.47□□□□□ -2.17
RFX2P48378 RNA5SP425-201ENST00000410336 112 ntBASIC1.47□□□□□ -2.17
RFX2P48378 RNU2-51P-201ENST00000410708 197 ntBASIC1.47□□□□□ -2.17
RFX2P48378 Z98742.3-201ENST00000418637 326 ntBASIC1.47□□□□□ -2.17
RFX2P48378 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RFX2P48378 AC003989.2-201ENST00000440224 169 ntBASIC1.47□□□□□ -2.17
RFX2P48378 AC008267.6-201ENST00000441664 139 ntBASIC1.47□□□□□ -2.17
RFX2P48378 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.47□□□□□ -2.17
RFX2P48378 AC005908.1-201ENST00000468701 347 ntBASIC1.47□□□□□ -2.17
RFX2P48378 RPS29P11-201ENST00000496507 171 ntBASIC1.47□□□□□ -2.17
RFX2P48378 RNU6-313P-201ENST00000516317 112 ntBASIC1.47□□□□□ -2.17
RFX2P48378 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.47□□□□□ -2.17
RFX2P48378 AC108081.1-201ENST00000604358 221 ntBASIC1.47□□□□□ -2.17
RFX2P48378 SNORD115-40-201ENST00000606510 82 ntBASIC1.47□□□□□ -2.17
RFX2P48378 MIR6852-201ENST00000621699 66 ntBASIC1.47□□□□□ -2.17
RFX2P48378 AL596211.1-201ENST00000569873 2277 ntBASIC1.47□□□□□ -2.17
RFX2P48378 Y_RNA.280-201ENST00000364765 112 ntBASIC1.46□□□□□ -2.18
RFX2P48378 RNU1-133P-201ENST00000364867 167 ntBASIC1.46□□□□□ -2.18
RFX2P48378 SNORA1.2-201ENST00000365189 134 ntBASIC1.46□□□□□ -2.18
RFX2P48378 RNU6-1168P-201ENST00000390831 104 ntBASIC1.46□□□□□ -2.18
RFX2P48378 AL627390.1-201ENST00000396055 340 ntBASIC1.46□□□□□ -2.18
RFX2P48378 AL158147.1-201ENST00000443970 75 ntBASIC1.46□□□□□ -2.18
RFX2P48378 HMGN2P23-201ENST00000456759 269 ntBASIC1.46□□□□□ -2.18
RFX2P48378 RPS29P24-201ENST00000486345 171 ntBASIC1.46□□□□□ -2.18
RFX2P48378 RNU6-479P-201ENST00000516348 105 ntBASIC1.46□□□□□ -2.18
RFX2P48378 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
RFX2P48378 MIR8063-201ENST00000621930 81 ntBASIC1.46□□□□□ -2.18
RFX2P48378 AC091932.4-201ENST00000623386 200 ntBASIC1.46□□□□□ -2.18
RFX2P48378 MIR449A-201ENST00000362113 91 ntBASIC1.45□□□□□ -2.18
RFX2P48378 RNU6-1081P-201ENST00000384537 107 ntBASIC1.45□□□□□ -2.18
RFX2P48378 RNU7-80P-201ENST00000459562 61 ntBASIC1.45□□□□□ -2.18
RFX2P48378 AC107297.1-201ENST00000459991 176 ntBASIC1.45□□□□□ -2.18
RFX2P48378 UBE2DNL-203ENST00000474922 222 ntBASIC1.45□□□□□ -2.18
RFX2P48378 RNU6-240P-201ENST00000516098 97 ntBASIC1.45□□□□□ -2.18
RFX2P48378 RNU6-922P-201ENST00000516753 99 ntBASIC1.45□□□□□ -2.18
RFX2P48378 SNORA74.3-201ENST00000517108 154 ntBASIC1.45□□□□□ -2.18
RFX2P48378 AC133485.4-201ENST00000561835 220 ntBASIC1.45□□□□□ -2.18
RFX2P48378 AC138907.4-201ENST00000570107 226 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms