Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 Y_RNA.240-201ENST00000364469 95 ntBASIC1.38□□□□□ -2.19
PTPN9P43378 RNU6-1067P-201ENST00000384752 107 ntBASIC1.38□□□□□ -2.19
PTPN9P43378 RNU6-1054P-201ENST00000411293 104 ntBASIC1.38□□□□□ -2.19
PTPN9P43378 BTF3P4-201ENST00000418852 495 ntBASIC1.38□□□□□ -2.19
PTPN9P43378 AC009474.2-201ENST00000451383 136 ntBASIC1.38□□□□□ -2.19
PTPN9P43378 RNU1-123P-201ENST00000458950 160 ntBASIC1.38□□□□□ -2.19
PTPN9P43378 RNU7-95P-201ENST00000459222 64 ntBASIC1.38□□□□□ -2.19
PTPN9P43378 AC068338.1-201ENST00000565567 176 ntBASIC1.38□□□□□ -2.19
PTPN9P43378 MIR4421-201ENST00000578133 69 ntBASIC1.38□□□□□ -2.19
PTPN9P43378 MIR378D2-201ENST00000580636 98 ntBASIC1.38□□□□□ -2.19
PTPN9P43378 MIR4764-201ENST00000580680 88 ntBASIC1.38□□□□□ -2.19
PTPN9P43378 AL365205.2-201ENST00000594586 68 ntBASIC1.38□□□□□ -2.19
PTPN9P43378 Y_RNA.370-201ENST00000365589 108 ntBASIC1.37□□□□□ -2.19
PTPN9P43378 Y_RNA.410-201ENST00000383992 113 ntBASIC1.37□□□□□ -2.19
PTPN9P43378 MIR520C-201ENST00000385005 87 ntBASIC1.37□□□□□ -2.19
PTPN9P43378 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
PTPN9P43378 AP1B1P2-201ENST00000416196 106 ntBASIC1.37□□□□□ -2.19
PTPN9P43378 RPS29P29-201ENST00000456396 171 ntBASIC1.37□□□□□ -2.19
PTPN9P43378 AC004223.1-201ENST00000479840 271 ntBASIC1.37□□□□□ -2.19
PTPN9P43378 SNORD116-25-201ENST00000516517 92 ntBASIC1.37□□□□□ -2.19
PTPN9P43378 RN7SKP88-201ENST00000516847 250 ntBASIC1.37□□□□□ -2.19
PTPN9P43378 RNU6-182P-201ENST00000516970 105 ntBASIC1.37□□□□□ -2.19
PTPN9P43378 MIR3660-201ENST00000584845 100 ntBASIC1.37□□□□□ -2.19
PTPN9P43378 AC090425.1-201ENST00000610007 140 ntBASIC1.37□□□□□ -2.19
PTPN9P43378 7SK.8-201ENST00000612110 250 ntBASIC1.37□□□□□ -2.19
PTPN9P43378 AC004792.1-201ENST00000614523 137 ntBASIC1.37□□□□□ -2.19
PTPN9P43378 7SK.11-201ENST00000615477 250 ntBASIC1.37□□□□□ -2.19
PTPN9P43378 7SK.13-201ENST00000622040 250 ntBASIC1.37□□□□□ -2.19
PTPN9P43378 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-34-201ENST00000362441 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-12-201ENST00000362583 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 Y_RNA.37-201ENST00000362606 108 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-29-201ENST00000362834 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-9-201ENST00000362912 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-21-201ENST00000362963 81 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-14-201ENST00000363090 81 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-13-201ENST00000363358 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-41-201ENST00000363608 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-11-201ENST00000363616 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-5-201ENST00000363633 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-39-201ENST00000363694 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-4-201ENST00000363810 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-16-201ENST00000363887 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-6-201ENST00000363942 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 RNA5SP48-201ENST00000363969 126 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-42-201ENST00000364273 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-15-201ENST00000364809 81 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-1-201ENST00000364961 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-26-201ENST00000365067 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-10-201ENST00000365073 81 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-43-201ENST00000365503 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-36-201ENST00000365629 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 Y_RNA.537-201ENST00000384626 109 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 RNU2-64P-201ENST00000411315 191 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.36□□□□□ -2.19
PTPN9P43378 RNU2-13P-201ENST00000515909 113 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 RNU6-1219P-201ENST00000516143 112 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 MIR548AR-201ENST00000582191 57 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 AP001485.1-201ENST00000604799 199 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 SNORD115-40-201ENST00000606510 82 ntBASIC1.36□□□□□ -2.19
PTPN9P43378 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
PTPN9P43378 RNU6-978P-201ENST00000364371 103 ntBASIC1.35□□□□□ -2.19
PTPN9P43378 RNU6-1292P-201ENST00000383856 107 ntBASIC1.35□□□□□ -2.19
PTPN9P43378 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.35□□□□□ -2.19
PTPN9P43378 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.35□□□□□ -2.19
PTPN9P43378 RNU6-1270P-201ENST00000517128 108 ntBASIC1.35□□□□□ -2.19
PTPN9P43378 CYP3A52P-201ENST00000563326 91 ntBASIC1.35□□□□□ -2.19
PTPN9P43378 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.35□□□□□ -2.19
PTPN9P43378 SNORA7.1-201ENST00000363750 139 ntBASIC1.34□□□□□ -2.19
PTPN9P43378 RNU6-682P-201ENST00000363843 106 ntBASIC1.34□□□□□ -2.19
PTPN9P43378 RNU6-597P-201ENST00000365620 102 ntBASIC1.34□□□□□ -2.19
PTPN9P43378 SNORA40.5-201ENST00000391061 128 ntBASIC1.34□□□□□ -2.19
PTPN9P43378 SNORA40.6-201ENST00000391153 128 ntBASIC1.34□□□□□ -2.19
PTPN9P43378 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.34□□□□□ -2.19
PTPN9P43378 AL603825.1-201ENST00000438481 80 ntBASIC1.34□□□□□ -2.19
PTPN9P43378 AC107297.1-201ENST00000459991 176 ntBASIC1.34□□□□□ -2.19
PTPN9P43378 AC107027.2-201ENST00000512197 115 ntBASIC1.34□□□□□ -2.19
PTPN9P43378 RNU7-181P-201ENST00000517234 74 ntBASIC1.34□□□□□ -2.19
PTPN9P43378 AC022559.1-201ENST00000520905 205 ntBASIC1.34□□□□□ -2.19
PTPN9P43378 AL096861.1-201ENST00000610899 123 ntBASIC1.34□□□□□ -2.19
PTPN9P43378 MIR8065-201ENST00000620577 100 ntBASIC1.34□□□□□ -2.19
PTPN9P43378 AC008133.2-201ENST00000624540 351 ntBASIC1.34□□□□□ -2.19
PTPN9P43378 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PTPN9P43378 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PTPN9P43378 SNORA24-201ENST00000384096 131 ntBASIC1.33□□□□□ -2.2
PTPN9P43378 Y_RNA.441-201ENST00000384123 112 ntBASIC1.33□□□□□ -2.2
PTPN9P43378 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
PTPN9P43378 SNORD28B-201ENST00000390993 75 ntBASIC1.33□□□□□ -2.2
PTPN9P43378 RNU6-938P-201ENST00000411285 103 ntBASIC1.33□□□□□ -2.2
PTPN9P43378 MTND5P15-201ENST00000434246 349 ntBASIC1.33□□□□□ -2.2
PTPN9P43378 AL133373.1-201ENST00000497098 94 ntBASIC1.33□□□□□ -2.2
PTPN9P43378 Y_RNA.662-201ENST00000516028 97 ntBASIC1.33□□□□□ -2.2
PTPN9P43378 AP003484.1-201ENST00000530974 250 ntBASIC1.33□□□□□ -2.2
PTPN9P43378 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PTPN9P43378 RNU6-1189P-201ENST00000383958 107 ntBASIC1.32□□□□□ -2.2
PTPN9P43378 SNORA70.7-201ENST00000384159 133 ntBASIC1.32□□□□□ -2.2
PTPN9P43378 MIR3192-201ENST00000584920 77 ntBASIC1.32□□□□□ -2.2
PTPN9P43378 snoU13.31-201ENST00000607291 104 ntBASIC1.32□□□□□ -2.2
PTPN9P43378 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
PTPN9P43378 RNU4-84P-201ENST00000364200 139 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms