Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 RNU6-740P-201ENST00000364734 105 ntBASIC0.08□□□□□ -2.4
BRCA1P38398 AC236972.2-201ENST00000434979 310 ntBASIC0.08□□□□□ -2.4
BRCA1P38398 RPL39P25-201ENST00000449384 154 ntBASIC0.08□□□□□ -2.4
BRCA1P38398 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.08□□□□□ -2.4
BRCA1P38398 MRPS35P2-201ENST00000508242 191 ntBASIC0.08□□□□□ -2.4
BRCA1P38398 RNU7-25P-201ENST00000516544 62 ntBASIC0.08□□□□□ -2.4
BRCA1P38398 RNU7-4P-201ENST00000516961 62 ntBASIC0.08□□□□□ -2.4
BRCA1P38398 RNU6-1048P-201ENST00000364054 107 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNA5SP368-201ENST00000364298 116 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU4-40P-201ENST00000364351 143 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU6-1040P-201ENST00000383974 107 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 Y_RNA.463-201ENST00000384271 102 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU6-1319P-201ENST00000390855 104 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU6-747P-201ENST00000390928 104 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU6-241P-201ENST00000391148 104 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD100-201ENST00000408573 76 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU6-447P-201ENST00000410293 104 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU6-1118P-201ENST00000410382 104 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU6-1076P-201ENST00000410397 104 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU6-355P-201ENST00000410427 104 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU6-791P-201ENST00000410467 104 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU6-705P-201ENST00000410601 104 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU6-1100P-201ENST00000410691 104 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU6-860P-201ENST00000410860 104 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU6-1217P-201ENST00000411276 104 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU6-785P-201ENST00000411324 104 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 PMCHL1-202ENST00000423102 261 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU7-156P-201ENST00000517214 74 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 U6.90-201ENST00000614007 104 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 U6.70-201ENST00000620287 104 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-34-201ENST00000362441 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-12-201ENST00000362583 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-29-201ENST00000362834 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-9-201ENST00000362912 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-21-201ENST00000362963 81 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-14-201ENST00000363090 81 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-13-201ENST00000363358 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-41-201ENST00000363608 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-11-201ENST00000363616 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-5-201ENST00000363633 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-39-201ENST00000363694 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-4-201ENST00000363810 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-16-201ENST00000363887 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-6-201ENST00000363942 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-42-201ENST00000364273 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-15-201ENST00000364809 81 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-1-201ENST00000364961 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-26-201ENST00000365067 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-10-201ENST00000365073 81 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-43-201ENST00000365503 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-36-201ENST00000365629 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORA51.10-201ENST00000384418 136 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 RNU2-59P-201ENST00000410482 191 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SEPT14P8-201ENST00000508026 178 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 Y_RNA.691-201ENST00000516611 103 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORD115-40-201ENST00000606510 82 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 AC104985.2-201ENST00000620598 500 ntBASIC0.07□□□□□ -2.4
BRCA1P38398 SNORA1.1-201ENST00000364671 133 ntBASIC0.06□□□□□ -2.4
BRCA1P38398 RNA5SP117-201ENST00000365294 118 ntBASIC0.06□□□□□ -2.4
BRCA1P38398 RNY3-201ENST00000365484 102 ntBASIC0.06□□□□□ -2.4
BRCA1P38398 RNU6-708P-201ENST00000384217 107 ntBASIC0.06□□□□□ -2.4
BRCA1P38398 RNU6-21P-201ENST00000384710 107 ntBASIC0.06□□□□□ -2.4
BRCA1P38398 AL590004.1-201ENST00000405321 300 ntBASIC0.06□□□□□ -2.4
BRCA1P38398 RNU6-383P-201ENST00000410864 94 ntBASIC0.06□□□□□ -2.4
BRCA1P38398 AC138393.2-201ENST00000414742 246 ntBASIC0.06□□□□□ -2.4
BRCA1P38398 AC098614.3-201ENST00000438957 440 ntBASIC0.06□□□□□ -2.4
BRCA1P38398 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.06□□□□□ -2.4
BRCA1P38398 RNU6-848P-201ENST00000515948 107 ntBASIC0.06□□□□□ -2.4
BRCA1P38398 RNU6-617P-201ENST00000516147 107 ntBASIC0.06□□□□□ -2.4
BRCA1P38398 RNU6-473P-201ENST00000516164 107 ntBASIC0.06□□□□□ -2.4
BRCA1P38398 RNU6-1049P-201ENST00000516414 107 ntBASIC0.06□□□□□ -2.4
BRCA1P38398 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.06□□□□□ -2.4
BRCA1P38398 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.06□□□□□ -2.4
BRCA1P38398 Y_RNA.7-201ENST00000362352 102 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 RNU6-899P-201ENST00000363947 107 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 Y_RNA.259-201ENST00000364619 101 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 MT-TF-201ENST00000387314 71 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 RNY4P36-201ENST00000391116 96 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 SNORA26.5-201ENST00000391215 123 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 MIR938-201ENST00000401216 83 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 SNORD71-201ENST00000411292 86 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.05□□□□□ -2.4
BRCA1P38398 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.05□□□□□ -2.4
BRCA1P38398 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.05□□□□□ -2.4
BRCA1P38398 AC008608.1-201ENST00000603910 127 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 AC122108.2-201ENST00000611946 526 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 AC084781.2-201ENST00000615568 161 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 MIR376A1-201ENST00000616574 68 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 MIR4272-201ENST00000635924 64 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 Y_RNA.241-201ENST00000364470 117 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 Y_RNA.423-201ENST00000384057 113 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 Y_RNA.551-201ENST00000384661 102 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 MT-TT-201ENST00000387460 66 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 Y_RNA.619-201ENST00000410951 90 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 AL512326.2-201ENST00000426359 151 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 AC087499.4-201ENST00000448505 178 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 Y_RNA.666-201ENST00000516187 112 ntBASIC0.05□□□□□ -2.4
BRCA1P38398 RNU6-126P-201ENST00000516685 103 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms