Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 RNU6-768P-201ENST00000384683 107 ntBASIC1.66□□□□□ -2.14
HOXD12P35452 MIR452-201ENST00000385020 85 ntBASIC1.66□□□□□ -2.14
HOXD12P35452 MIR516B2-201ENST00000385190 85 ntBASIC1.66□□□□□ -2.14
HOXD12P35452 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HOXD12P35452 AC027119.1-201ENST00000440877 241 ntBASIC1.66□□□□□ -2.14
HOXD12P35452 RNU7-25P-201ENST00000516544 62 ntBASIC1.66□□□□□ -2.14
HOXD12P35452 MTND5P41-201ENST00000517498 206 ntBASIC1.66□□□□□ -2.14
HOXD12P35452 AC090142.3-201ENST00000519012 385 ntBASIC1.66□□□□□ -2.14
HOXD12P35452 AC015688.6-201ENST00000577737 104 ntBASIC1.66□□□□□ -2.14
HOXD12P35452 MIR3618-201ENST00000580330 88 ntBASIC1.66□□□□□ -2.14
HOXD12P35452 DNAJC19P2-201ENST00000593340 302 ntBASIC1.66□□□□□ -2.14
HOXD12P35452 AC015726.2-201ENST00000620112 122 ntBASIC1.66□□□□□ -2.14
HOXD12P35452 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HOXD12P35452 RNU6-199P-201ENST00000362954 107 ntBASIC1.65□□□□□ -2.15
HOXD12P35452 RNU6-888P-201ENST00000363010 101 ntBASIC1.65□□□□□ -2.15
HOXD12P35452 Y_RNA.118-201ENST00000363300 101 ntBASIC1.65□□□□□ -2.15
HOXD12P35452 Y_RNA.170-201ENST00000363746 110 ntBASIC1.65□□□□□ -2.15
HOXD12P35452 RNU6-151P-201ENST00000364158 107 ntBASIC1.65□□□□□ -2.15
HOXD12P35452 RNU6-978P-201ENST00000364371 103 ntBASIC1.65□□□□□ -2.15
HOXD12P35452 Y_RNA.393-201ENST00000383936 102 ntBASIC1.65□□□□□ -2.15
HOXD12P35452 Y_RNA.547-201ENST00000384654 119 ntBASIC1.65□□□□□ -2.15
HOXD12P35452 MIR513A1-201ENST00000385138 129 ntBASIC1.65□□□□□ -2.15
HOXD12P35452 RNU1-98P-201ENST00000458992 160 ntBASIC1.65□□□□□ -2.15
HOXD12P35452 MIR3658-201ENST00000636291 56 ntBASIC1.65□□□□□ -2.15
HOXD12P35452 MIR6844-201ENST00000637122 62 ntBASIC1.65□□□□□ -2.15
HOXD12P35452 SNORA25.7-201ENST00000364375 127 ntBASIC1.64□□□□□ -2.15
HOXD12P35452 SNORA1-201ENST00000384107 130 ntBASIC1.64□□□□□ -2.15
HOXD12P35452 MIR526A1-201ENST00000384897 85 ntBASIC1.64□□□□□ -2.15
HOXD12P35452 MIR136-201ENST00000385207 82 ntBASIC1.64□□□□□ -2.15
HOXD12P35452 SNORD37.2-201ENST00000391075 66 ntBASIC1.64□□□□□ -2.15
HOXD12P35452 AC007751.1-201ENST00000529260 376 ntBASIC1.64□□□□□ -2.15
HOXD12P35452 BX248123.2-201ENST00000606318 124 ntBASIC1.64□□□□□ -2.15
HOXD12P35452 AL161722.3-201ENST00000605789 2983 ntBASIC1.63□□□□□ -2.15
HOXD12P35452 Y_RNA.327-201ENST00000365201 102 ntBASIC1.63□□□□□ -2.15
HOXD12P35452 RNU6-597P-201ENST00000365620 102 ntBASIC1.63□□□□□ -2.15
HOXD12P35452 RNU6-1336P-201ENST00000383886 109 ntBASIC1.63□□□□□ -2.15
HOXD12P35452 MIR548A2-201ENST00000384956 97 ntBASIC1.63□□□□□ -2.15
HOXD12P35452 MIR518F-201ENST00000384973 87 ntBASIC1.63□□□□□ -2.15
HOXD12P35452 SNX2P2-201ENST00000424553 323 ntBASIC1.63□□□□□ -2.15
HOXD12P35452 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXD12P35452 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXD12P35452 MIR3129-201ENST00000581095 76 ntBASIC1.63□□□□□ -2.15
HOXD12P35452 FAM106DP-201ENST00000586416 501 ntBASIC1.63□□□□□ -2.15
HOXD12P35452 Y_RNA.778-201ENST00000620203 90 ntBASIC1.63□□□□□ -2.15
HOXD12P35452 SNORD115-28-201ENST00000363931 81 ntBASIC1.62□□□□□ -2.15
HOXD12P35452 RNU6-818P-201ENST00000364837 108 ntBASIC1.62□□□□□ -2.15
HOXD12P35452 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.62□□□□□ -2.15
HOXD12P35452 RNU7-200P-201ENST00000516105 62 ntBASIC1.62□□□□□ -2.15
HOXD12P35452 AC019176.1-201ENST00000518519 225 ntBASIC1.62□□□□□ -2.15
HOXD12P35452 MIR4419B-201ENST00000577260 68 ntBASIC1.62□□□□□ -2.15
HOXD12P35452 MIR3646-201ENST00000578301 84 ntBASIC1.62□□□□□ -2.15
HOXD12P35452 MTND1P7-201ENST00000632801 297 ntBASIC1.62□□□□□ -2.15
HOXD12P35452 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
HOXD12P35452 RNU6-774P-201ENST00000363238 107 ntBASIC1.61□□□□□ -2.15
HOXD12P35452 RNU6-1082P-201ENST00000364574 107 ntBASIC1.61□□□□□ -2.15
HOXD12P35452 RNU4-11P-201ENST00000365287 132 ntBASIC1.61□□□□□ -2.15
HOXD12P35452 MIR517C-201ENST00000385103 95 ntBASIC1.61□□□□□ -2.15
HOXD12P35452 SNORA67.6-201ENST00000391093 99 ntBASIC1.61□□□□□ -2.15
HOXD12P35452 SNORA75.5-201ENST00000391291 81 ntBASIC1.61□□□□□ -2.15
HOXD12P35452 RNU6-588P-201ENST00000410281 105 ntBASIC1.61□□□□□ -2.15
HOXD12P35452 AF228730.3-201ENST00000436691 102 ntBASIC1.61□□□□□ -2.15
HOXD12P35452 RPS29P23-201ENST00000458635 123 ntBASIC1.61□□□□□ -2.15
HOXD12P35452 RNU6-917P-201ENST00000516294 104 ntBASIC1.61□□□□□ -2.15
HOXD12P35452 RNU6-830P-201ENST00000516353 107 ntBASIC1.61□□□□□ -2.15
HOXD12P35452 SNORA18.4-201ENST00000516440 124 ntBASIC1.61□□□□□ -2.15
HOXD12P35452 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.61□□□□□ -2.15
HOXD12P35452 AL365205.2-201ENST00000594586 68 ntBASIC1.61□□□□□ -2.15
HOXD12P35452 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.61□□□□□ -2.15
HOXD12P35452 AC134878.1-201ENST00000619901 243 ntBASIC1.61□□□□□ -2.15
HOXD12P35452 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.61□□□□□ -2.15
HOXD12P35452 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HOXD12P35452 RNU6-60P-201ENST00000364792 103 ntBASIC1.6□□□□□ -2.15
HOXD12P35452 SNORA2.2-201ENST00000365473 135 ntBASIC1.6□□□□□ -2.15
HOXD12P35452 Y_RNA.400-201ENST00000383963 111 ntBASIC1.6□□□□□ -2.15
HOXD12P35452 Y_RNA.506-201ENST00000384494 102 ntBASIC1.6□□□□□ -2.15
HOXD12P35452 Y_RNA.542-201ENST00000384641 111 ntBASIC1.6□□□□□ -2.15
HOXD12P35452 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.6□□□□□ -2.15
HOXD12P35452 snoU13.18-201ENST00000459483 104 ntBASIC1.6□□□□□ -2.15
HOXD12P35452 AC092991.1-201ENST00000477176 376 ntBASIC1.6□□□□□ -2.15
HOXD12P35452 RNU4-57P-201ENST00000515980 135 ntBASIC1.6□□□□□ -2.15
HOXD12P35452 AL442644.1-201ENST00000454390 3105 ntBASIC1.6□□□□□ -2.15
HOXD12P35452 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
HOXD12P35452 Y_RNA.37-201ENST00000362606 108 ntBASIC1.59□□□□□ -2.15
HOXD12P35452 SNORD77.3-201ENST00000391113 65 ntBASIC1.59□□□□□ -2.15
HOXD12P35452 U8.17-201ENST00000391292 132 ntBASIC1.59□□□□□ -2.15
HOXD12P35452 MIR548M-201ENST00000408260 86 ntBASIC1.59□□□□□ -2.15
HOXD12P35452 MIR1276-201ENST00000408707 83 ntBASIC1.59□□□□□ -2.15
HOXD12P35452 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.59□□□□□ -2.15
HOXD12P35452 SUMO1P3-201ENST00000439961 304 ntBASIC1.59□□□□□ -2.15
HOXD12P35452 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.59□□□□□ -2.15
HOXD12P35452 RNU6-346P-201ENST00000516288 111 ntBASIC1.59□□□□□ -2.15
HOXD12P35452 SNORA18.7-201ENST00000516910 131 ntBASIC1.59□□□□□ -2.15
HOXD12P35452 RNU7-181P-201ENST00000517234 74 ntBASIC1.59□□□□□ -2.15
HOXD12P35452 AC112693.2-201ENST00000556538 232 ntBASIC1.59□□□□□ -2.15
HOXD12P35452 MIR3133-201ENST00000583157 78 ntBASIC1.59□□□□□ -2.15
HOXD12P35452 AL365434.2-201ENST00000607979 234 ntBASIC1.59□□□□□ -2.15
HOXD12P35452 MIR6504-201ENST00000613520 61 ntBASIC1.59□□□□□ -2.15
HOXD12P35452 RNU6-1292P-201ENST00000383856 107 ntBASIC1.58□□□□□ -2.16
HOXD12P35452 RNU6-125P-201ENST00000384505 107 ntBASIC1.58□□□□□ -2.16
HOXD12P35452 MIR653-201ENST00000385279 96 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms