Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RNU6-938P-201ENST00000411285 103 ntBASIC-0.41□□□□□ -2.48
RPA3P35244 MTND3P8-201ENST00000412909 339 ntBASIC-0.41□□□□□ -2.48
RPA3P35244 POLR2KP2-201ENST00000438155 177 ntBASIC-0.41□□□□□ -2.48
RPA3P35244 AC087499.4-201ENST00000448505 178 ntBASIC-0.41□□□□□ -2.48
RPA3P35244 TRBVB-201ENST00000477100 408 ntBASIC-0.41□□□□□ -2.48
RPA3P35244 RPS29P24-201ENST00000486345 171 ntBASIC-0.41□□□□□ -2.48
RPA3P35244 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.41□□□□□ -2.48
RPA3P35244 RNU7-149P-201ENST00000516739 59 ntBASIC-0.41□□□□□ -2.48
RPA3P35244 AC131281.1-201ENST00000522984 164 ntBASIC-0.41□□□□□ -2.48
RPA3P35244 MIR4423-201ENST00000580922 80 ntBASIC-0.41□□□□□ -2.48
RPA3P35244 AC022079.1-201ENST00000621546 602 ntBASIC-0.41□□□□□ -2.48
RPA3P35244 RNU6-403P-201ENST00000363163 104 ntBASIC-0.42□□□□□ -2.48
RPA3P35244 SNORD28-201ENST00000384706 75 ntBASIC-0.42□□□□□ -2.48
RPA3P35244 MIR329-2-201ENST00000385029 84 ntBASIC-0.42□□□□□ -2.48
RPA3P35244 MIR214-201ENST00000385214 110 ntBASIC-0.42□□□□□ -2.48
RPA3P35244 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.42□□□□□ -2.48
RPA3P35244 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.42□□□□□ -2.48
RPA3P35244 RPL39P25-201ENST00000449384 154 ntBASIC-0.42□□□□□ -2.48
RPA3P35244 U2.1-201ENST00000618978 145 ntBASIC-0.42□□□□□ -2.48
RPA3P35244 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.43□□□□□ -2.48
RPA3P35244 MIR628-201ENST00000385229 95 ntBASIC-0.43□□□□□ -2.48
RPA3P35244 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.43□□□□□ -2.48
RPA3P35244 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.43□□□□□ -2.48
RPA3P35244 RNU6-135P-201ENST00000516769 101 ntBASIC-0.43□□□□□ -2.48
RPA3P35244 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.43□□□□□ -2.48
RPA3P35244 MIR6082-201ENST00000613604 109 ntBASIC-0.43□□□□□ -2.48
RPA3P35244 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.43□□□□□ -2.48
RPA3P35244 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.44□□□□□ -2.48
RPA3P35244 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.44□□□□□ -2.48
RPA3P35244 SNORA72.4-201ENST00000384174 132 ntBASIC-0.44□□□□□ -2.48
RPA3P35244 MTATP6P17-201ENST00000431030 672 ntBASIC-0.44□□□□□ -2.48
RPA3P35244 AL138752.1-201ENST00000452964 351 ntBASIC-0.44□□□□□ -2.48
RPA3P35244 AC104692.1-201ENST00000472406 90 ntBASIC-0.44□□□□□ -2.48
RPA3P35244 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.44□□□□□ -2.48
RPA3P35244 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.44□□□□□ -2.48
RPA3P35244 AC138869.1-201ENST00000568623 124 ntBASIC-0.44□□□□□ -2.48
RPA3P35244 AC006600.1-201ENST00000572529 153 ntBASIC-0.44□□□□□ -2.48
RPA3P35244 RNU1-29P-201ENST00000606574 126 ntBASIC-0.44□□□□□ -2.48
RPA3P35244 AC122108.2-201ENST00000611946 526 ntBASIC-0.44□□□□□ -2.48
RPA3P35244 AP001282.2-201ENST00000616149 309 ntBASIC-0.44□□□□□ -2.48
RPA3P35244 RNU6-801P-201ENST00000364087 105 ntBASIC-0.45□□□□□ -2.48
RPA3P35244 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.45□□□□□ -2.48
RPA3P35244 MIR548I3-201ENST00000408378 149 ntBASIC-0.45□□□□□ -2.48
RPA3P35244 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.45□□□□□ -2.48
RPA3P35244 AC096644.2-201ENST00000429278 159 ntBASIC-0.45□□□□□ -2.48
RPA3P35244 AC023449.1-201ENST00000454464 154 ntBASIC-0.45□□□□□ -2.48
RPA3P35244 RNU7-165P-201ENST00000458864 60 ntBASIC-0.45□□□□□ -2.48
RPA3P35244 SNORD36C-201ENST00000516733 66 ntBASIC-0.45□□□□□ -2.48
RPA3P35244 MIR3152-201ENST00000579801 74 ntBASIC-0.45□□□□□ -2.48
RPA3P35244 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.45□□□□□ -2.48
RPA3P35244 AC244669.1-204ENST00000621564 178 ntBASIC-0.45□□□□□ -2.48
RPA3P35244 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.46□□□□□ -2.48
RPA3P35244 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.46□□□□□ -2.48
RPA3P35244 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.46□□□□□ -2.48
RPA3P35244 RNU6-291P-201ENST00000384720 107 ntBASIC-0.46□□□□□ -2.48
RPA3P35244 MIR215-201ENST00000384858 110 ntBASIC-0.46□□□□□ -2.48
RPA3P35244 RNU6-269P-201ENST00000391077 97 ntBASIC-0.46□□□□□ -2.48
RPA3P35244 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.46□□□□□ -2.48
RPA3P35244 RNA5SP163-201ENST00000410304 99 ntBASIC-0.46□□□□□ -2.48
RPA3P35244 RNU4-14P-201ENST00000410858 122 ntBASIC-0.46□□□□□ -2.48
RPA3P35244 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.46□□□□□ -2.48
RPA3P35244 RNU2-11P-201ENST00000459191 187 ntBASIC-0.46□□□□□ -2.48
RPA3P35244 RNU7-110P-201ENST00000516891 62 ntBASIC-0.46□□□□□ -2.48
RPA3P35244 MIR4639-201ENST00000584938 69 ntBASIC-0.46□□□□□ -2.48
RPA3P35244 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.47□□□□□ -2.48
RPA3P35244 RNU6-652P-201ENST00000365488 107 ntBASIC-0.47□□□□□ -2.48
RPA3P35244 U8.15-201ENST00000390947 134 ntBASIC-0.47□□□□□ -2.48
RPA3P35244 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.47□□□□□ -2.48
RPA3P35244 AL049861.1-201ENST00000603130 150 ntBASIC-0.47□□□□□ -2.48
RPA3P35244 AL133255.1-201ENST00000606374 441 ntBASIC-0.47□□□□□ -2.48
RPA3P35244 AC011373.1-201ENST00000607270 237 ntBASIC-0.47□□□□□ -2.48
RPA3P35244 AC138305.3-201ENST00000624988 240 ntBASIC-0.47□□□□□ -2.48
RPA3P35244 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.48□□□□□ -2.49
RPA3P35244 RNU6-310P-201ENST00000384655 107 ntBASIC-0.48□□□□□ -2.49
RPA3P35244 RNU6-308P-201ENST00000390957 107 ntBASIC-0.48□□□□□ -2.49
RPA3P35244 SNORD77.3-201ENST00000391113 65 ntBASIC-0.48□□□□□ -2.49
RPA3P35244 RNA5SP237-201ENST00000410414 113 ntBASIC-0.48□□□□□ -2.49
RPA3P35244 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.48□□□□□ -2.49
RPA3P35244 SNORD4A-201ENST00000459174 72 ntBASIC-0.48□□□□□ -2.49
RPA3P35244 RNU6-693P-201ENST00000516134 107 ntBASIC-0.48□□□□□ -2.49
RPA3P35244 RNU6-911P-201ENST00000516523 104 ntBASIC-0.48□□□□□ -2.49
RPA3P35244 MTND5P34-201ENST00000568888 325 ntBASIC-0.48□□□□□ -2.49
RPA3P35244 AL662814.1-201ENST00000617364 121 ntBASIC-0.48□□□□□ -2.49
RPA3P35244 MIR3688-2-201ENST00000636963 87 ntBASIC-0.48□□□□□ -2.49
RPA3P35244 RNU4-80P-201ENST00000363200 141 ntBASIC-0.49□□□□□ -2.49
RPA3P35244 SNORD114-12-201ENST00000365400 75 ntBASIC-0.49□□□□□ -2.49
RPA3P35244 RNU6-890P-201ENST00000384121 107 ntBASIC-0.49□□□□□ -2.49
RPA3P35244 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.49□□□□□ -2.49
RPA3P35244 SNORA72.6-201ENST00000384520 129 ntBASIC-0.49□□□□□ -2.49
RPA3P35244 RNU6-535P-201ENST00000384722 107 ntBASIC-0.49□□□□□ -2.49
RPA3P35244 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.49□□□□□ -2.49
RPA3P35244 RNU4-30P-201ENST00000410245 143 ntBASIC-0.49□□□□□ -2.49
RPA3P35244 RNU6-383P-201ENST00000410864 94 ntBASIC-0.49□□□□□ -2.49
RPA3P35244 AC010655.3-201ENST00000478818 450 ntBASIC-0.49□□□□□ -2.49
RPA3P35244 RNA5SP285-201ENST00000516619 119 ntBASIC-0.49□□□□□ -2.49
RPA3P35244 RNU6-765P-201ENST00000516916 99 ntBASIC-0.49□□□□□ -2.49
RPA3P35244 MIR4491-201ENST00000581087 68 ntBASIC-0.49□□□□□ -2.49
RPA3P35244 RNU6-161P-201ENST00000363051 106 ntBASIC-0.5□□□□□ -2.49
RPA3P35244 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.5□□□□□ -2.49
RPA3P35244 RNU6-597P-201ENST00000365620 102 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms