Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 MIR887-201ENST00000401258 79 ntBASIC2.93□□□□□ -1.94
GPC1P35052 MIR889-201ENST00000401280 79 ntBASIC2.93□□□□□ -1.94
GPC1P35052 Y_RNA.607-201ENST00000410597 98 ntBASIC2.93□□□□□ -1.94
GPC1P35052 UQCRHP3-201ENST00000451503 251 ntBASIC2.93□□□□□ -1.94
GPC1P35052 SNORD123-201ENST00000459473 70 ntBASIC2.93□□□□□ -1.94
GPC1P35052 SNORA70.24-201ENST00000517233 118 ntBASIC2.93□□□□□ -1.94
GPC1P35052 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.93□□□□□ -1.94
GPC1P35052 SEPT14P17-201ENST00000617978 177 ntBASIC2.93□□□□□ -1.94
GPC1P35052 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
GPC1P35052 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.92□□□□□ -1.94
GPC1P35052 RNU6-633P-201ENST00000362612 103 ntBASIC2.92□□□□□ -1.94
GPC1P35052 U8.9-201ENST00000365667 134 ntBASIC2.92□□□□□ -1.94
GPC1P35052 SNORA46-201ENST00000384762 135 ntBASIC2.92□□□□□ -1.94
GPC1P35052 MIR34C-201ENST00000384831 77 ntBASIC2.92□□□□□ -1.94
GPC1P35052 RNA5SP274-201ENST00000410484 108 ntBASIC2.92□□□□□ -1.94
GPC1P35052 RNU2-7P-201ENST00000410794 178 ntBASIC2.92□□□□□ -1.94
GPC1P35052 AC005326.1-201ENST00000429197 123 ntBASIC2.92□□□□□ -1.94
GPC1P35052 BX510359.1-201ENST00000456973 237 ntBASIC2.92□□□□□ -1.94
GPC1P35052 RNU6-1006P-201ENST00000516998 103 ntBASIC2.92□□□□□ -1.94
GPC1P35052 MIR5680-201ENST00000577577 84 ntBASIC2.92□□□□□ -1.94
GPC1P35052 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.92□□□□□ -1.94
GPC1P35052 AL355596.1-201ENST00000565399 3996 ntBASIC2.92□□□□□ -1.94
GPC1P35052 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.91□□□□□ -1.94
GPC1P35052 AC009487.2-201ENST00000420969 6821 ntBASIC2.91□□□□□ -1.94
GPC1P35052 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.91□□□□□ -1.94
GPC1P35052 RNU1-109P-201ENST00000383960 147 ntBASIC2.91□□□□□ -1.94
GPC1P35052 MIR627-201ENST00000384979 97 ntBASIC2.91□□□□□ -1.94
GPC1P35052 RNU4-47P-201ENST00000410876 114 ntBASIC2.91□□□□□ -1.94
GPC1P35052 AL445685.2-201ENST00000422551 342 ntBASIC2.91□□□□□ -1.94
GPC1P35052 SNORA74D-201ENST00000516404 141 ntBASIC2.91□□□□□ -1.94
GPC1P35052 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.91□□□□□ -1.94
GPC1P35052 MAPK10-266ENST00000641066 6555 ntBASIC2.9□□□□□ -1.94
GPC1P35052 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
GPC1P35052 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
GPC1P35052 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
GPC1P35052 RNU6-865P-201ENST00000364772 107 ntBASIC2.9□□□□□ -1.95
GPC1P35052 Y_RNA.316-201ENST00000365118 111 ntBASIC2.9□□□□□ -1.95
GPC1P35052 SNORD67-201ENST00000390833 111 ntBASIC2.9□□□□□ -1.95
GPC1P35052 RNA5SP344-201ENST00000411081 104 ntBASIC2.9□□□□□ -1.95
GPC1P35052 MIR3126-201ENST00000577443 74 ntBASIC2.9□□□□□ -1.95
GPC1P35052 UBL5P2-201ENST00000583788 219 ntBASIC2.9□□□□□ -1.95
GPC1P35052 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
GPC1P35052 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
GPC1P35052 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
GPC1P35052 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
GPC1P35052 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
GPC1P35052 Y_RNA.448-201ENST00000384185 108 ntBASIC2.89□□□□□ -1.95
GPC1P35052 Y_RNA.567-201ENST00000384736 106 ntBASIC2.89□□□□□ -1.95
GPC1P35052 RNU6-1067P-201ENST00000384752 107 ntBASIC2.89□□□□□ -1.95
GPC1P35052 MIR483-201ENST00000385070 76 ntBASIC2.89□□□□□ -1.95
GPC1P35052 RNA5SP120-201ENST00000410900 112 ntBASIC2.89□□□□□ -1.95
GPC1P35052 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.89□□□□□ -1.95
GPC1P35052 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.89□□□□□ -1.95
GPC1P35052 SPINT5P-201ENST00000448174 155 ntBASIC2.89□□□□□ -1.95
GPC1P35052 MIR5195-201ENST00000583555 115 ntBASIC2.89□□□□□ -1.95
GPC1P35052 MIR7112-201ENST00000616126 65 ntBASIC2.89□□□□□ -1.95
GPC1P35052 AL449363.1-201ENST00000617815 186 ntBASIC2.89□□□□□ -1.95
GPC1P35052 AP006437.1-201ENST00000641440 3685 ntBASIC2.89□□□□□ -1.95
GPC1P35052 AC108206.1-201ENST00000570186 4159 ntBASIC2.89□□□□□ -1.95
GPC1P35052 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.89□□□□□ -1.95
GPC1P35052 RNU6-525P-201ENST00000363685 104 ntBASIC2.88□□□□□ -1.95
GPC1P35052 MIR526A1-201ENST00000384897 85 ntBASIC2.88□□□□□ -1.95
GPC1P35052 MIR548G-201ENST00000408442 89 ntBASIC2.88□□□□□ -1.95
GPC1P35052 RNU6-1086P-201ENST00000410930 100 ntBASIC2.88□□□□□ -1.95
GPC1P35052 RNA5SP492-201ENST00000411330 114 ntBASIC2.88□□□□□ -1.95
GPC1P35052 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.88□□□□□ -1.95
GPC1P35052 RNU1-98P-201ENST00000458992 160 ntBASIC2.88□□□□□ -1.95
GPC1P35052 RN7SL20P-201ENST00000488827 297 ntBASIC2.88□□□□□ -1.95
GPC1P35052 SNORD67.1-201ENST00000516618 108 ntBASIC2.88□□□□□ -1.95
GPC1P35052 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.88□□□□□ -1.95
GPC1P35052 MIR3651-201ENST00000630427 90 ntBASIC2.88□□□□□ -1.95
GPC1P35052 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.88□□□□□ -1.95
GPC1P35052 RNU6-1244P-201ENST00000363614 108 ntBASIC2.87□□□□□ -1.95
GPC1P35052 SNORD115-27-201ENST00000364430 82 ntBASIC2.87□□□□□ -1.95
GPC1P35052 SNORA7.4-201ENST00000384249 137 ntBASIC2.87□□□□□ -1.95
GPC1P35052 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.87□□□□□ -1.95
GPC1P35052 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.87□□□□□ -1.95
GPC1P35052 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.87□□□□□ -1.95
GPC1P35052 AC104389.3-201ENST00000445629 235 ntBASIC2.87□□□□□ -1.95
GPC1P35052 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.87□□□□□ -1.95
GPC1P35052 RN7SL633P-201ENST00000488974 297 ntBASIC2.87□□□□□ -1.95
GPC1P35052 RNU7-35P-201ENST00000517174 62 ntBASIC2.87□□□□□ -1.95
GPC1P35052 RNU6-90P-201ENST00000606352 106 ntBASIC2.87□□□□□ -1.95
GPC1P35052 AC105081.1-201ENST00000617727 106 ntBASIC2.87□□□□□ -1.95
GPC1P35052 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.87□□□□□ -1.95
GPC1P35052 MIR622-201ENST00000638396 96 ntBASIC2.87□□□□□ -1.95
GPC1P35052 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.87□□□□□ -1.95
GPC1P35052 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
GPC1P35052 RNU6-457P-201ENST00000363999 107 ntBASIC2.86□□□□□ -1.95
GPC1P35052 Y_RNA.537-201ENST00000384626 109 ntBASIC2.86□□□□□ -1.95
GPC1P35052 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.86□□□□□ -1.95
GPC1P35052 snoU13.16-201ENST00000459350 104 ntBASIC2.86□□□□□ -1.95
GPC1P35052 SCARNA16.3-201ENST00000516595 184 ntBASIC2.86□□□□□ -1.95
GPC1P35052 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.86□□□□□ -1.95
GPC1P35052 FAM106DP-201ENST00000586416 501 ntBASIC2.86□□□□□ -1.95
GPC1P35052 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
GPC1P35052 MIR22-201ENST00000362190 85 ntBASIC2.85□□□□□ -1.95
GPC1P35052 SNORA38.1-201ENST00000364172 131 ntBASIC2.85□□□□□ -1.95
GPC1P35052 RPL31P63-201ENST00000422565 375 ntBASIC2.85□□□□□ -1.95
GPC1P35052 AC092427.1-202ENST00000430569 476 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms