Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC015922.2-201ENST00000435593 184 ntBASIC1.64□□□□□ -2.15
CIITAP33076 RNU7-95P-201ENST00000459222 64 ntBASIC1.64□□□□□ -2.15
CIITAP33076 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.64□□□□□ -2.15
CIITAP33076 TRMT112P2-201ENST00000512910 132 ntBASIC1.64□□□□□ -2.15
CIITAP33076 RNU7-25P-201ENST00000516544 62 ntBASIC1.64□□□□□ -2.15
CIITAP33076 RNU6-126P-201ENST00000516685 103 ntBASIC1.64□□□□□ -2.15
CIITAP33076 AC090142.3-201ENST00000519012 385 ntBASIC1.64□□□□□ -2.15
CIITAP33076 DNAJC19P2-201ENST00000593340 302 ntBASIC1.64□□□□□ -2.15
CIITAP33076 SNORD3E-202ENST00000627253 216 ntBASIC1.64□□□□□ -2.15
CIITAP33076 ICE2P2-201ENST00000483823 2787 ntBASIC1.64□□□□□ -2.15
CIITAP33076 RNU6-1123P-201ENST00000362347 106 ntBASIC1.63□□□□□ -2.15
CIITAP33076 RNY1P5-201ENST00000383890 115 ntBASIC1.63□□□□□ -2.15
CIITAP33076 RNU6-449P-201ENST00000383914 107 ntBASIC1.63□□□□□ -2.15
CIITAP33076 Y_RNA.393-201ENST00000383936 102 ntBASIC1.63□□□□□ -2.15
CIITAP33076 Y_RNA.547-201ENST00000384654 119 ntBASIC1.63□□□□□ -2.15
CIITAP33076 SNORA26-201ENST00000391286 122 ntBASIC1.63□□□□□ -2.15
CIITAP33076 SNORA79-201ENST00000408376 140 ntBASIC1.63□□□□□ -2.15
CIITAP33076 MIR548O-201ENST00000408583 114 ntBASIC1.63□□□□□ -2.15
CIITAP33076 SNRPGP13-201ENST00000442212 177 ntBASIC1.63□□□□□ -2.15
CIITAP33076 HMGN2P32-201ENST00000444648 269 ntBASIC1.63□□□□□ -2.15
CIITAP33076 HSPE1P24-201ENST00000450782 238 ntBASIC1.63□□□□□ -2.15
CIITAP33076 snoU13.18-201ENST00000459483 104 ntBASIC1.63□□□□□ -2.15
CIITAP33076 RNA5SP445-201ENST00000515889 115 ntBASIC1.63□□□□□ -2.15
CIITAP33076 RNU6-693P-201ENST00000516134 107 ntBASIC1.63□□□□□ -2.15
CIITAP33076 SNORD116-25-201ENST00000516517 92 ntBASIC1.63□□□□□ -2.15
CIITAP33076 RNU6-504P-201ENST00000516568 104 ntBASIC1.63□□□□□ -2.15
CIITAP33076 RNU6-1270P-201ENST00000517128 108 ntBASIC1.63□□□□□ -2.15
CIITAP33076 SUMO2P16-201ENST00000519475 264 ntBASIC1.63□□□□□ -2.15
CIITAP33076 DNAJC19P9-201ENST00000555084 351 ntBASIC1.63□□□□□ -2.15
CIITAP33076 AL359821.1-201ENST00000605519 182 ntBASIC1.63□□□□□ -2.15
CIITAP33076 AL512598.1-201ENST00000610158 273 ntBASIC1.63□□□□□ -2.15
CIITAP33076 Y_RNA.778-201ENST00000620203 90 ntBASIC1.63□□□□□ -2.15
CIITAP33076 MIR376A2-201ENST00000636782 80 ntBASIC1.63□□□□□ -2.15
CIITAP33076 RNU6-151P-201ENST00000364158 107 ntBASIC1.62□□□□□ -2.15
CIITAP33076 RNU6-746P-201ENST00000384112 109 ntBASIC1.62□□□□□ -2.15
CIITAP33076 RNU6-938P-201ENST00000411285 103 ntBASIC1.62□□□□□ -2.15
CIITAP33076 RNU7-197P-201ENST00000458836 62 ntBASIC1.62□□□□□ -2.15
CIITAP33076 RNU4-57P-201ENST00000515980 135 ntBASIC1.62□□□□□ -2.15
CIITAP33076 RNU6-830P-201ENST00000516353 107 ntBASIC1.62□□□□□ -2.15
CIITAP33076 AC015688.6-201ENST00000577737 104 ntBASIC1.62□□□□□ -2.15
CIITAP33076 MIR3133-201ENST00000583157 78 ntBASIC1.62□□□□□ -2.15
CIITAP33076 AL365205.2-201ENST00000594586 68 ntBASIC1.62□□□□□ -2.15
CIITAP33076 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.62□□□□□ -2.15
CIITAP33076 Y_RNA.116-201ENST00000363292 103 ntBASIC1.61□□□□□ -2.15
CIITAP33076 Y_RNA.242-201ENST00000364473 110 ntBASIC1.61□□□□□ -2.15
CIITAP33076 RNU6-187P-201ENST00000384139 106 ntBASIC1.61□□□□□ -2.15
CIITAP33076 SNORD77.3-201ENST00000391113 65 ntBASIC1.61□□□□□ -2.15
CIITAP33076 RNU6-588P-201ENST00000410281 105 ntBASIC1.61□□□□□ -2.15
CIITAP33076 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.61□□□□□ -2.15
CIITAP33076 AF228730.3-201ENST00000436691 102 ntBASIC1.61□□□□□ -2.15
CIITAP33076 AC005908.1-201ENST00000468701 347 ntBASIC1.61□□□□□ -2.15
CIITAP33076 AC023790.1-201ENST00000482174 347 ntBASIC1.61□□□□□ -2.15
CIITAP33076 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.61□□□□□ -2.15
CIITAP33076 RNU6-917P-201ENST00000516294 104 ntBASIC1.61□□□□□ -2.15
CIITAP33076 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.61□□□□□ -2.15
CIITAP33076 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.61□□□□□ -2.15
CIITAP33076 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.61□□□□□ -2.15
CIITAP33076 ZNF209P-201ENST00000593450 2304 ntBASIC1.6□□□□□ -2.15
CIITAP33076 MIR302D-201ENST00000362275 68 ntBASIC1.6□□□□□ -2.15
CIITAP33076 Y_RNA.251-201ENST00000364551 99 ntBASIC1.6□□□□□ -2.15
CIITAP33076 RNU4-11P-201ENST00000365287 132 ntBASIC1.6□□□□□ -2.15
CIITAP33076 Y_RNA.400-201ENST00000383963 111 ntBASIC1.6□□□□□ -2.15
CIITAP33076 Y_RNA.521-201ENST00000384560 114 ntBASIC1.6□□□□□ -2.15
CIITAP33076 MIR516B2-201ENST00000385190 85 ntBASIC1.6□□□□□ -2.15
CIITAP33076 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CIITAP33076 AL603908.1-201ENST00000406098 201 ntBASIC1.6□□□□□ -2.15
CIITAP33076 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.6□□□□□ -2.15
CIITAP33076 MIR3646-201ENST00000578301 84 ntBASIC1.6□□□□□ -2.15
CIITAP33076 MIR8070-201ENST00000616510 88 ntBASIC1.6□□□□□ -2.15
CIITAP33076 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.6□□□□□ -2.15
CIITAP33076 AC106754.2-201ENST00000623006 233 ntBASIC1.6□□□□□ -2.15
CIITAP33076 RNU6-1065P-201ENST00000384513 106 ntBASIC1.59□□□□□ -2.15
CIITAP33076 MIR802-201ENST00000390235 94 ntBASIC1.59□□□□□ -2.15
CIITAP33076 AC092991.1-201ENST00000477176 376 ntBASIC1.59□□□□□ -2.15
CIITAP33076 AC079140.2-201ENST00000506193 142 ntBASIC1.59□□□□□ -2.15
CIITAP33076 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.59□□□□□ -2.15
CIITAP33076 MIR3129-201ENST00000581095 76 ntBASIC1.59□□□□□ -2.15
CIITAP33076 MIR8063-201ENST00000621930 81 ntBASIC1.59□□□□□ -2.15
CIITAP33076 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.59□□□□□ -2.15
CIITAP33076 MTND1P7-201ENST00000632801 297 ntBASIC1.59□□□□□ -2.15
CIITAP33076 MIR6844-201ENST00000637122 62 ntBASIC1.59□□□□□ -2.15
CIITAP33076 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CIITAP33076 RNU6-199P-201ENST00000362954 107 ntBASIC1.58□□□□□ -2.16
CIITAP33076 Y_RNA.215-201ENST00000364204 112 ntBASIC1.58□□□□□ -2.16
CIITAP33076 MIR452-201ENST00000385020 85 ntBASIC1.58□□□□□ -2.16
CIITAP33076 MIR513A1-201ENST00000385138 129 ntBASIC1.58□□□□□ -2.16
CIITAP33076 MIR569-201ENST00000385228 96 ntBASIC1.58□□□□□ -2.16
CIITAP33076 MIR653-201ENST00000385279 96 ntBASIC1.58□□□□□ -2.16
CIITAP33076 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.58□□□□□ -2.16
CIITAP33076 SNORA75.5-201ENST00000391291 81 ntBASIC1.58□□□□□ -2.16
CIITAP33076 MIR548M-201ENST00000408260 86 ntBASIC1.58□□□□□ -2.16
CIITAP33076 Y_RNA.703-201ENST00000516846 111 ntBASIC1.58□□□□□ -2.16
CIITAP33076 RNU6-902P-201ENST00000517212 91 ntBASIC1.58□□□□□ -2.16
CIITAP33076 AC015726.2-201ENST00000620112 122 ntBASIC1.58□□□□□ -2.16
CIITAP33076 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CIITAP33076 Y_RNA.37-201ENST00000362606 108 ntBASIC1.57□□□□□ -2.16
CIITAP33076 SNORD115-28-201ENST00000363931 81 ntBASIC1.57□□□□□ -2.16
CIITAP33076 RNU6-1292P-201ENST00000383856 107 ntBASIC1.57□□□□□ -2.16
CIITAP33076 SNORD38C-201ENST00000384381 69 ntBASIC1.57□□□□□ -2.16
CIITAP33076 Y_RNA.494-201ENST00000384432 111 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 201.4 ms