Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SNORD115-42-201ENST00000364273 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-15-201ENST00000364809 81 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-1-201ENST00000364961 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-26-201ENST00000365067 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-10-201ENST00000365073 81 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 RNU6-690P-201ENST00000365242 106 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-43-201ENST00000365503 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 Y_RNA.366-201ENST00000365540 102 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-36-201ENST00000365629 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 MIR764-201ENST00000390811 85 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 AL590004.2-201ENST00000404787 371 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 MIR1289-2-201ENST00000408360 111 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 RN7SKP223-201ENST00000410582 62 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 AL356320.1-201ENST00000429616 163 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 RNA5SP320-201ENST00000516263 124 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 AC090821.2-201ENST00000523552 176 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 SNORD115-40-201ENST00000606510 82 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 AC025166.1-201ENST00000612411 163 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 AC091932.4-201ENST00000623386 200 ntBASIC2.19□□□□□ -2.06
HOXC12P31275 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HOXC12P31275 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
HOXC12P31275 RNU6-834P-201ENST00000362367 110 ntBASIC2.18□□□□□ -2.06
HOXC12P31275 DEFA7P-201ENST00000382676 285 ntBASIC2.18□□□□□ -2.06
HOXC12P31275 RNU6-1064P-201ENST00000410626 104 ntBASIC2.18□□□□□ -2.06
HOXC12P31275 AC004965.1-201ENST00000413033 213 ntBASIC2.18□□□□□ -2.06
HOXC12P31275 Y_RNA.676-201ENST00000516393 96 ntBASIC2.18□□□□□ -2.06
HOXC12P31275 MTND5P34-201ENST00000568888 325 ntBASIC2.18□□□□□ -2.06
HOXC12P31275 AC095038.3-201ENST00000634439 195 ntBASIC2.18□□□□□ -2.06
HOXC12P31275 U6.95-201ENST00000636931 70 ntBASIC2.18□□□□□ -2.06
HOXC12P31275 MIR302B-201ENST00000362188 73 ntBASIC2.17□□□□□ -2.06
HOXC12P31275 RNU6-349P-201ENST00000362402 107 ntBASIC2.17□□□□□ -2.06
HOXC12P31275 RNU6-1325P-201ENST00000364905 105 ntBASIC2.17□□□□□ -2.06
HOXC12P31275 AC244636.1-201ENST00000421152 228 ntBASIC2.17□□□□□ -2.06
HOXC12P31275 HMGN2P38-201ENST00000423806 265 ntBASIC2.17□□□□□ -2.06
HOXC12P31275 RPL23AP6-201ENST00000446637 472 ntBASIC2.17□□□□□ -2.06
HOXC12P31275 SNORD123-201ENST00000459473 70 ntBASIC2.17□□□□□ -2.06
HOXC12P31275 RPS29P24-201ENST00000486345 171 ntBASIC2.17□□□□□ -2.06
HOXC12P31275 MIR548AR-201ENST00000582191 57 ntBASIC2.17□□□□□ -2.06
HOXC12P31275 AL096840.1-201ENST00000603287 93 ntBASIC2.17□□□□□ -2.06
HOXC12P31275 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
HOXC12P31275 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HOXC12P31275 RNA5SP456-201ENST00000364002 114 ntBASIC2.16□□□□□ -2.06
HOXC12P31275 Y_RNA.346-201ENST00000365385 112 ntBASIC2.16□□□□□ -2.06
HOXC12P31275 RNU6-439P-201ENST00000384188 106 ntBASIC2.16□□□□□ -2.06
HOXC12P31275 RNY1P6-201ENST00000384193 109 ntBASIC2.16□□□□□ -2.06
HOXC12P31275 MIR194-1-201ENST00000384892 85 ntBASIC2.16□□□□□ -2.06
HOXC12P31275 RPS12P2-201ENST00000439728 269 ntBASIC2.16□□□□□ -2.06
HOXC12P31275 RNU7-96P-201ENST00000459535 64 ntBASIC2.16□□□□□ -2.06
HOXC12P31275 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
HOXC12P31275 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HOXC12P31275 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
HOXC12P31275 RNU6-476P-201ENST00000384726 107 ntBASIC2.15□□□□□ -2.07
HOXC12P31275 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HOXC12P31275 AL359511.1-201ENST00000402970 211 ntBASIC2.15□□□□□ -2.07
HOXC12P31275 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.15□□□□□ -2.07
HOXC12P31275 AL035398.1-201ENST00000430869 322 ntBASIC2.15□□□□□ -2.07
HOXC12P31275 JTBP1-201ENST00000441314 247 ntBASIC2.15□□□□□ -2.07
HOXC12P31275 RNU7-67P-201ENST00000459003 62 ntBASIC2.15□□□□□ -2.07
HOXC12P31275 AC234781.5-201ENST00000508429 271 ntBASIC2.15□□□□□ -2.07
HOXC12P31275 RNU6-998P-201ENST00000515894 101 ntBASIC2.15□□□□□ -2.07
HOXC12P31275 SNORD33.1-201ENST00000516213 88 ntBASIC2.15□□□□□ -2.07
HOXC12P31275 RNU6-958P-201ENST00000516995 106 ntBASIC2.15□□□□□ -2.07
HOXC12P31275 RNU6-548P-201ENST00000517083 115 ntBASIC2.15□□□□□ -2.07
HOXC12P31275 HSPE1P19-201ENST00000603327 295 ntBASIC2.15□□□□□ -2.07
HOXC12P31275 AL121890.5-201ENST00000620848 304 ntBASIC2.15□□□□□ -2.07
HOXC12P31275 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HOXC12P31275 MTND5P18-201ENST00000445624 1801 ntBASIC2.14□□□□□ -2.07
HOXC12P31275 AC016717.2-201ENST00000609089 5141 ntBASIC2.14□□□□□ -2.07
HOXC12P31275 MIR6073-201ENST00000352083 89 ntBASIC2.14□□□□□ -2.07
HOXC12P31275 Y_RNA.528-201ENST00000384575 108 ntBASIC2.14□□□□□ -2.07
HOXC12P31275 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
HOXC12P31275 MIR676-201ENST00000390702 67 ntBASIC2.14□□□□□ -2.07
HOXC12P31275 SNORD28B-201ENST00000390993 75 ntBASIC2.14□□□□□ -2.07
HOXC12P31275 RNU2-11P-201ENST00000459191 187 ntBASIC2.14□□□□□ -2.07
HOXC12P31275 RNU6-917P-201ENST00000516294 104 ntBASIC2.14□□□□□ -2.07
HOXC12P31275 MIR1273D-201ENST00000577266 86 ntBASIC2.14□□□□□ -2.07
HOXC12P31275 AL391516.1-201ENST00000554380 2449 ntBASIC2.14□□□□□ -2.07
HOXC12P31275 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HOXC12P31275 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HOXC12P31275 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HOXC12P31275 RNU6-215P-201ENST00000365169 102 ntBASIC2.13□□□□□ -2.07
HOXC12P31275 RNA5SP259-201ENST00000365541 109 ntBASIC2.13□□□□□ -2.07
HOXC12P31275 RNU6-1144P-201ENST00000384247 104 ntBASIC2.13□□□□□ -2.07
HOXC12P31275 RNU6-1067P-201ENST00000384752 107 ntBASIC2.13□□□□□ -2.07
HOXC12P31275 MIR570-201ENST00000384917 97 ntBASIC2.13□□□□□ -2.07
HOXC12P31275 MIRLET7F2-201ENST00000385277 83 ntBASIC2.13□□□□□ -2.07
HOXC12P31275 MIR548A3-201ENST00000385297 97 ntBASIC2.13□□□□□ -2.07
HOXC12P31275 RNA5SP181-201ENST00000410246 98 ntBASIC2.13□□□□□ -2.07
HOXC12P31275 HMGN2P19-201ENST00000425149 265 ntBASIC2.13□□□□□ -2.07
HOXC12P31275 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC12P31275 AC021443.1-201ENST00000604478 211 ntBASIC2.13□□□□□ -2.07
HOXC12P31275 MIR6129-201ENST00000616087 109 ntBASIC2.13□□□□□ -2.07
HOXC12P31275 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
HOXC12P31275 SNORD114-1-201ENST00000362705 72 ntBASIC2.12□□□□□ -2.07
HOXC12P31275 RNU4-16P-201ENST00000364737 141 ntBASIC2.12□□□□□ -2.07
HOXC12P31275 MIR513A1-201ENST00000385138 129 ntBASIC2.12□□□□□ -2.07
HOXC12P31275 RNA5SP136-201ENST00000410906 107 ntBASIC2.12□□□□□ -2.07
HOXC12P31275 SNORA74.3-201ENST00000517108 154 ntBASIC2.12□□□□□ -2.07
HOXC12P31275 MIR4299-201ENST00000577899 72 ntBASIC2.12□□□□□ -2.07
HOXC12P31275 AL670379.3-201ENST00000605040 251 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms