Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 Y_RNA.293-201ENST00000364908 93 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 RNU6-1138P-201ENST00000365359 106 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 RNU6-1335P-201ENST00000365426 107 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 RNU6-639P-201ENST00000384074 107 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 Y_RNA.486-201ENST00000384398 107 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 Y_RNA.537-201ENST00000384626 109 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 RNU6-1109P-201ENST00000391187 107 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 RNA5SP95-201ENST00000410319 137 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 RNU6-651P-201ENST00000411040 105 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 RPS3AP1-201ENST00000413190 320 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 AL035398.1-201ENST00000430869 322 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.61□□□□□ -2.31
HOXA9P31269 MTND4LP30-201ENST00000454092 297 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 RNU6-1007P-201ENST00000516586 107 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 RNU6-570P-201ENST00000517051 105 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 MIR4724-201ENST00000579485 89 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 AC044792.1-201ENST00000593294 196 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 AP001282.2-201ENST00000616149 309 ntBASIC0.61□□□□□ -2.31
HOXA9P31269 Y_RNA.14-201ENST00000362415 103 ntBASIC0.6□□□□□ -2.31
HOXA9P31269 Y_RNA.117-201ENST00000363294 101 ntBASIC0.6□□□□□ -2.31
HOXA9P31269 RNU6-211P-201ENST00000384047 107 ntBASIC0.6□□□□□ -2.31
HOXA9P31269 RNU6-514P-201ENST00000384208 107 ntBASIC0.6□□□□□ -2.31
HOXA9P31269 RNU6-1289P-201ENST00000384431 106 ntBASIC0.6□□□□□ -2.31
HOXA9P31269 MIR605-201ENST00000385078 83 ntBASIC0.6□□□□□ -2.31
HOXA9P31269 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.6□□□□□ -2.31
HOXA9P31269 SNORD77.4-201ENST00000516158 81 ntBASIC0.6□□□□□ -2.31
HOXA9P31269 MIR1273G-201ENST00000577677 100 ntBASIC0.6□□□□□ -2.31
HOXA9P31269 AC012433.1-201ENST00000588916 398 ntBASIC0.6□□□□□ -2.31
HOXA9P31269 AC037487.3-201ENST00000606668 112 ntBASIC0.6□□□□□ -2.31
HOXA9P31269 RNU6-94P-201ENST00000607728 107 ntBASIC0.6□□□□□ -2.31
HOXA9P31269 AC243829.3-201ENST00000622177 108 ntBASIC0.6□□□□□ -2.31
HOXA9P31269 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
HOXA9P31269 MIR367-201ENST00000362299 68 ntBASIC0.59□□□□□ -2.31
HOXA9P31269 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
HOXA9P31269 Y_RNA.275-201ENST00000364726 110 ntBASIC0.59□□□□□ -2.31
HOXA9P31269 Y_RNA.376-201ENST00000365638 108 ntBASIC0.59□□□□□ -2.31
HOXA9P31269 SNORA51.10-201ENST00000384418 136 ntBASIC0.59□□□□□ -2.31
HOXA9P31269 MIR526A2-201ENST00000390198 65 ntBASIC0.59□□□□□ -2.31
HOXA9P31269 MIR548O-201ENST00000408583 114 ntBASIC0.59□□□□□ -2.31
HOXA9P31269 RNU6-938P-201ENST00000411285 103 ntBASIC0.59□□□□□ -2.31
HOXA9P31269 Y_RNA.24-201ENST00000362508 103 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 Y_RNA.237-201ENST00000364439 102 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 Y_RNA.242-201ENST00000364473 110 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 SNORD113.3-201ENST00000364630 78 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 RNU6-740P-201ENST00000364734 105 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 MIR548A2-201ENST00000384956 97 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 MIR626-201ENST00000385032 94 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 Y_RNA.587-201ENST00000391210 103 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 SNORD111-201ENST00000408139 94 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 RNU6-613P-201ENST00000410412 108 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 RNU6-847P-201ENST00000411115 108 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 AC023449.1-201ENST00000454464 154 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 MTATP8P1-201ENST00000467115 207 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 AP003484.1-201ENST00000530974 250 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 AP003072.1-201ENST00000531740 145 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 Y_RNA.802-201ENST00000614892 130 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 AC243994.1-201ENST00000618627 109 ntBASIC0.58□□□□□ -2.32
HOXA9P31269 AC023934.1-201ENST00000574529 2389 ntBASIC0.57□□□□□ -2.32
HOXA9P31269 Y_RNA.11-201ENST00000362375 109 ntBASIC0.57□□□□□ -2.32
HOXA9P31269 SNORA1.2-201ENST00000365189 134 ntBASIC0.57□□□□□ -2.32
HOXA9P31269 SNORA24-201ENST00000384096 131 ntBASIC0.57□□□□□ -2.32
HOXA9P31269 RNU6-1067P-201ENST00000384752 107 ntBASIC0.57□□□□□ -2.32
HOXA9P31269 MT-TW-201ENST00000387382 68 ntBASIC0.57□□□□□ -2.32
HOXA9P31269 SNORD89-201ENST00000390981 114 ntBASIC0.57□□□□□ -2.32
HOXA9P31269 RPS26P5-201ENST00000418544 335 ntBASIC0.57□□□□□ -2.32
HOXA9P31269 AC090844.1-201ENST00000422019 156 ntBASIC0.57□□□□□ -2.32
HOXA9P31269 FABP5P4-201ENST00000437203 171 ntBASIC0.57□□□□□ -2.32
HOXA9P31269 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.57□□□□□ -2.32
HOXA9P31269 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.57□□□□□ -2.32
HOXA9P31269 MIR5688-201ENST00000580619 83 ntBASIC0.57□□□□□ -2.32
HOXA9P31269 AC104465.1-201ENST00000611365 139 ntBASIC0.57□□□□□ -2.32
HOXA9P31269 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.57□□□□□ -2.32
HOXA9P31269 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.57□□□□□ -2.32
HOXA9P31269 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
HOXA9P31269 SNORD45.3-201ENST00000363836 72 ntBASIC0.56□□□□□ -2.32
HOXA9P31269 Y_RNA.229-201ENST00000364347 113 ntBASIC0.56□□□□□ -2.32
HOXA9P31269 Y_RNA.326-201ENST00000365176 113 ntBASIC0.56□□□□□ -2.32
HOXA9P31269 SNORD61-201ENST00000384252 73 ntBASIC0.56□□□□□ -2.32
HOXA9P31269 RNU6-125P-201ENST00000384505 107 ntBASIC0.56□□□□□ -2.32
HOXA9P31269 RNU6-110P-201ENST00000384508 104 ntBASIC0.56□□□□□ -2.32
HOXA9P31269 SNORA2B-201ENST00000384583 137 ntBASIC0.56□□□□□ -2.32
HOXA9P31269 MIR518F-201ENST00000384973 87 ntBASIC0.56□□□□□ -2.32
HOXA9P31269 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.56□□□□□ -2.32
HOXA9P31269 U7.7-201ENST00000459276 60 ntBASIC0.56□□□□□ -2.32
HOXA9P31269 TRBVB-201ENST00000477100 408 ntBASIC0.56□□□□□ -2.32
HOXA9P31269 RNA5SP121-201ENST00000516537 101 ntBASIC0.56□□□□□ -2.32
HOXA9P31269 AC006006.1-201ENST00000603082 144 ntBASIC0.56□□□□□ -2.32
HOXA9P31269 AL353765.1-201ENST00000605514 183 ntBASIC0.56□□□□□ -2.32
HOXA9P31269 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
HOXA9P31269 RNU6-369P-201ENST00000362515 102 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 Y_RNA.37-201ENST00000362606 108 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 Y_RNA.44-201ENST00000362676 108 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 RNU6-238P-201ENST00000363313 106 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 SNORD115-28-201ENST00000363931 81 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 RNU6-580P-201ENST00000365159 107 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 RNU6-396P-201ENST00000365369 105 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 Y_RNA.483-201ENST00000384380 101 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 SNORA8.3-201ENST00000384679 139 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms