Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 U8.17-201ENST00000391292 132 ntBASIC1.86□□□□□ -2.11
CNGA1P29973 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.86□□□□□ -2.11
CNGA1P29973 SNORD111.1-201ENST00000516421 86 ntBASIC1.86□□□□□ -2.11
CNGA1P29973 RNU7-43P-201ENST00000516554 64 ntBASIC1.86□□□□□ -2.11
CNGA1P29973 RNU6-861P-201ENST00000516745 106 ntBASIC1.86□□□□□ -2.11
CNGA1P29973 RNU1-92P-201ENST00000517017 135 ntBASIC1.86□□□□□ -2.11
CNGA1P29973 RNU6-165P-201ENST00000517170 99 ntBASIC1.86□□□□□ -2.11
CNGA1P29973 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CNGA1P29973 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CNGA1P29973 RNU6-60P-201ENST00000364792 103 ntBASIC1.85□□□□□ -2.11
CNGA1P29973 MIR378D2-201ENST00000580636 98 ntBASIC1.85□□□□□ -2.11
CNGA1P29973 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CNGA1P29973 RNU6-978P-201ENST00000364371 103 ntBASIC1.84□□□□□ -2.11
CNGA1P29973 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.84□□□□□ -2.11
CNGA1P29973 MIR548AR-201ENST00000582191 57 ntBASIC1.84□□□□□ -2.11
CNGA1P29973 SNORA7.1-201ENST00000363750 139 ntBASIC1.83□□□□□ -2.12
CNGA1P29973 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CNGA1P29973 SNORA67.6-201ENST00000391093 99 ntBASIC1.83□□□□□ -2.12
CNGA1P29973 SEPT7P4-201ENST00000437076 306 ntBASIC1.83□□□□□ -2.12
CNGA1P29973 AC087499.4-201ENST00000448505 178 ntBASIC1.83□□□□□ -2.12
CNGA1P29973 SNORD116-25-201ENST00000516517 92 ntBASIC1.83□□□□□ -2.12
CNGA1P29973 RNU7-181P-201ENST00000517234 74 ntBASIC1.83□□□□□ -2.12
CNGA1P29973 MIR4764-201ENST00000580680 88 ntBASIC1.83□□□□□ -2.12
CNGA1P29973 MIR3668-201ENST00000582138 75 ntBASIC1.83□□□□□ -2.12
CNGA1P29973 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.83□□□□□ -2.12
CNGA1P29973 Y_RNA.37-201ENST00000362606 108 ntBASIC1.82□□□□□ -2.12
CNGA1P29973 SNORD28B-201ENST00000390993 75 ntBASIC1.82□□□□□ -2.12
CNGA1P29973 snoU13.18-201ENST00000459483 104 ntBASIC1.82□□□□□ -2.12
CNGA1P29973 Y_RNA.662-201ENST00000516028 97 ntBASIC1.82□□□□□ -2.12
CNGA1P29973 AL365205.2-201ENST00000594586 68 ntBASIC1.82□□□□□ -2.12
CNGA1P29973 AL096861.1-201ENST00000610899 123 ntBASIC1.82□□□□□ -2.12
CNGA1P29973 FTX_2.1-201ENST00000618816 94 ntBASIC1.82□□□□□ -2.12
CNGA1P29973 AC134878.1-201ENST00000619901 243 ntBASIC1.82□□□□□ -2.12
CNGA1P29973 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CNGA1P29973 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CNGA1P29973 SNORA1.2-201ENST00000365189 134 ntBASIC1.81□□□□□ -2.12
CNGA1P29973 SNORA1-201ENST00000384107 130 ntBASIC1.81□□□□□ -2.12
CNGA1P29973 Y_RNA.542-201ENST00000384641 111 ntBASIC1.81□□□□□ -2.12
CNGA1P29973 MIR520C-201ENST00000385005 87 ntBASIC1.81□□□□□ -2.12
CNGA1P29973 RNU5E-9P-201ENST00000411164 104 ntBASIC1.81□□□□□ -2.12
CNGA1P29973 RNU6-938P-201ENST00000411285 103 ntBASIC1.81□□□□□ -2.12
CNGA1P29973 AC006461.1-201ENST00000412637 326 ntBASIC1.81□□□□□ -2.12
CNGA1P29973 AF228730.3-201ENST00000436691 102 ntBASIC1.81□□□□□ -2.12
CNGA1P29973 AC107027.2-201ENST00000512197 115 ntBASIC1.81□□□□□ -2.12
CNGA1P29973 RN7SKP88-201ENST00000516847 250 ntBASIC1.81□□□□□ -2.12
CNGA1P29973 CYP3A52P-201ENST00000563326 91 ntBASIC1.81□□□□□ -2.12
CNGA1P29973 7SK.8-201ENST00000612110 250 ntBASIC1.81□□□□□ -2.12
CNGA1P29973 7SK.11-201ENST00000615477 250 ntBASIC1.81□□□□□ -2.12
CNGA1P29973 AL157834.3-201ENST00000615543 103 ntBASIC1.81□□□□□ -2.12
CNGA1P29973 7SK.13-201ENST00000622040 250 ntBASIC1.81□□□□□ -2.12
CNGA1P29973 MIR1276-201ENST00000408707 83 ntBASIC1.8□□□□□ -2.12
CNGA1P29973 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.8□□□□□ -2.12
CNGA1P29973 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.8□□□□□ -2.12
CNGA1P29973 RPL39P39-201ENST00000455840 151 ntBASIC1.8□□□□□ -2.12
CNGA1P29973 AC098479.1-201ENST00000609225 154 ntBASIC1.8□□□□□ -2.12
CNGA1P29973 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CNGA1P29973 RNU6-392P-201ENST00000364926 101 ntBASIC1.79□□□□□ -2.12
CNGA1P29973 Y_RNA.410-201ENST00000383992 113 ntBASIC1.79□□□□□ -2.12
CNGA1P29973 Y_RNA.441-201ENST00000384123 112 ntBASIC1.79□□□□□ -2.12
CNGA1P29973 RNU6-907P-201ENST00000390924 102 ntBASIC1.79□□□□□ -2.12
CNGA1P29973 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.79□□□□□ -2.12
CNGA1P29973 RNU2-13P-201ENST00000515909 113 ntBASIC1.79□□□□□ -2.12
CNGA1P29973 MIR3192-201ENST00000584920 77 ntBASIC1.79□□□□□ -2.12
CNGA1P29973 MIR6504-201ENST00000613520 61 ntBASIC1.79□□□□□ -2.12
CNGA1P29973 ZNF209P-201ENST00000593450 2304 ntBASIC1.79□□□□□ -2.12
CNGA1P29973 SNORD115-34-201ENST00000362441 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-12-201ENST00000362583 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-29-201ENST00000362834 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-9-201ENST00000362912 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-21-201ENST00000362963 81 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-14-201ENST00000363090 81 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-13-201ENST00000363358 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-41-201ENST00000363608 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-11-201ENST00000363616 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-5-201ENST00000363633 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-39-201ENST00000363694 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-4-201ENST00000363810 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-16-201ENST00000363887 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-6-201ENST00000363942 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 RNU4-84P-201ENST00000364200 139 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-42-201ENST00000364273 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-15-201ENST00000364809 81 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-1-201ENST00000364961 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-26-201ENST00000365067 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-10-201ENST00000365073 81 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-43-201ENST00000365503 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 Y_RNA.370-201ENST00000365589 108 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-36-201ENST00000365629 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD77.3-201ENST00000391113 65 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.78□□□□□ -2.12
CNGA1P29973 RNU7-41P-201ENST00000515917 61 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD36C-201ENST00000516733 66 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 AP003484.1-201ENST00000530974 250 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.78□□□□□ -2.12
CNGA1P29973 AP001485.1-201ENST00000604799 199 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 SNORD115-40-201ENST00000606510 82 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.78□□□□□ -2.12
CNGA1P29973 AC008133.2-201ENST00000624540 351 ntBASIC1.78□□□□□ -2.12
CNGA1P29973 RNU6-597P-201ENST00000365620 102 ntBASIC1.77□□□□□ -2.13
CNGA1P29973 RNU6-1292P-201ENST00000383856 107 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 337.7 ms