Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RNY3P16-201ENST00000516338 101 ntBASIC1.07□□□□□ -2.24
CDH3P22223 RNA5SP102-201ENST00000516865 106 ntBASIC1.07□□□□□ -2.24
CDH3P22223 PRELID3BP2-201ENST00000605362 201 ntBASIC1.07□□□□□ -2.24
CDH3P22223 AC008133.2-201ENST00000624540 351 ntBASIC1.07□□□□□ -2.24
CDH3P22223 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CDH3P22223 Y_RNA.66-201ENST00000362862 102 ntBASIC1.06□□□□□ -2.24
CDH3P22223 SNORA25.3-201ENST00000363205 127 ntBASIC1.06□□□□□ -2.24
CDH3P22223 MIR570-201ENST00000384917 97 ntBASIC1.06□□□□□ -2.24
CDH3P22223 MIR518F-201ENST00000384973 87 ntBASIC1.06□□□□□ -2.24
CDH3P22223 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CDH3P22223 RNU6-1228P-201ENST00000391014 107 ntBASIC1.06□□□□□ -2.24
CDH3P22223 Y_RNA.622-201ENST00000411091 108 ntBASIC1.06□□□□□ -2.24
CDH3P22223 RNU2-55P-201ENST00000411146 174 ntBASIC1.06□□□□□ -2.24
CDH3P22223 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
CDH3P22223 SNRPGP8-201ENST00000454064 226 ntBASIC1.06□□□□□ -2.24
CDH3P22223 UBL5P1-201ENST00000507979 193 ntBASIC1.06□□□□□ -2.24
CDH3P22223 SNORD79.1-201ENST00000516069 84 ntBASIC1.06□□□□□ -2.24
CDH3P22223 SNORA70.22-201ENST00000517160 124 ntBASIC1.06□□□□□ -2.24
CDH3P22223 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.06□□□□□ -2.24
CDH3P22223 Y_RNA.91-201ENST00000363042 107 ntBASIC1.05□□□□□ -2.24
CDH3P22223 RNA5SP264-201ENST00000363115 107 ntBASIC1.05□□□□□ -2.24
CDH3P22223 RNA5SP48-201ENST00000363969 126 ntBASIC1.05□□□□□ -2.24
CDH3P22223 Y_RNA.308-201ENST00000365043 101 ntBASIC1.05□□□□□ -2.24
CDH3P22223 SNORD24-201ENST00000383884 75 ntBASIC1.05□□□□□ -2.24
CDH3P22223 SNORD61-201ENST00000384252 73 ntBASIC1.05□□□□□ -2.24
CDH3P22223 Y_RNA.626-201ENST00000411288 95 ntBASIC1.05□□□□□ -2.24
CDH3P22223 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.05□□□□□ -2.24
CDH3P22223 RNU6-561P-201ENST00000516222 102 ntBASIC1.05□□□□□ -2.24
CDH3P22223 RNU6-1299P-201ENST00000516316 100 ntBASIC1.05□□□□□ -2.24
CDH3P22223 RNU6-126P-201ENST00000516685 103 ntBASIC1.05□□□□□ -2.24
CDH3P22223 RNU6-111P-201ENST00000517179 105 ntBASIC1.05□□□□□ -2.24
CDH3P22223 AC004817.2-201ENST00000561794 651 ntBASIC1.05□□□□□ -2.24
CDH3P22223 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
CDH3P22223 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.05□□□□□ -2.24
CDH3P22223 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.05□□□□□ -2.24
CDH3P22223 RNU6-888P-201ENST00000363010 101 ntBASIC1.04□□□□□ -2.24
CDH3P22223 SNORD45.3-201ENST00000363836 72 ntBASIC1.04□□□□□ -2.24
CDH3P22223 Y_RNA.634-201ENST00000364811 113 ntBASIC1.04□□□□□ -2.24
CDH3P22223 Y_RNA.432-201ENST00000384087 111 ntBASIC1.04□□□□□ -2.24
CDH3P22223 SNORA75.2-201ENST00000391138 150 ntBASIC1.04□□□□□ -2.24
CDH3P22223 SNORA75.3-201ENST00000391231 150 ntBASIC1.04□□□□□ -2.24
CDH3P22223 MIR1185-1-201ENST00000408598 86 ntBASIC1.04□□□□□ -2.24
CDH3P22223 MIR1276-201ENST00000408707 83 ntBASIC1.04□□□□□ -2.24
CDH3P22223 RNU2-13P-201ENST00000515909 113 ntBASIC1.04□□□□□ -2.24
CDH3P22223 RNU6-365P-201ENST00000517113 106 ntBASIC1.04□□□□□ -2.24
CDH3P22223 RNU6-1270P-201ENST00000517128 108 ntBASIC1.04□□□□□ -2.24
CDH3P22223 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
CDH3P22223 AC097639.2-201ENST00000603159 172 ntBASIC1.04□□□□□ -2.24
CDH3P22223 MIR6504-201ENST00000613520 61 ntBASIC1.04□□□□□ -2.24
CDH3P22223 MIR4251-201ENST00000635819 61 ntBASIC1.04□□□□□ -2.24
CDH3P22223 SNORD114-27-201ENST00000363766 70 ntBASIC1.03□□□□□ -2.24
CDH3P22223 SNORD115-28-201ENST00000363931 81 ntBASIC1.03□□□□□ -2.24
CDH3P22223 RNY1-201ENST00000364228 113 ntBASIC1.03□□□□□ -2.24
CDH3P22223 SNORA20.1-201ENST00000364790 130 ntBASIC1.03□□□□□ -2.24
CDH3P22223 Y_RNA.370-201ENST00000365589 108 ntBASIC1.03□□□□□ -2.24
CDH3P22223 Y_RNA.494-201ENST00000384432 111 ntBASIC1.03□□□□□ -2.24
CDH3P22223 MIR222-201ENST00000384992 110 ntBASIC1.03□□□□□ -2.24
CDH3P22223 snosnR66.1-201ENST00000391095 99 ntBASIC1.03□□□□□ -2.24
CDH3P22223 RNU6-493P-201ENST00000391321 108 ntBASIC1.03□□□□□ -2.24
CDH3P22223 MIR1302-7-201ENST00000408841 72 ntBASIC1.03□□□□□ -2.24
CDH3P22223 RNU6-938P-201ENST00000411285 103 ntBASIC1.03□□□□□ -2.24
CDH3P22223 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.03□□□□□ -2.24
CDH3P22223 snoU13.18-201ENST00000459483 104 ntBASIC1.03□□□□□ -2.24
CDH3P22223 RNU6-693P-201ENST00000516134 107 ntBASIC1.03□□□□□ -2.24
CDH3P22223 RNU4-71P-201ENST00000516258 113 ntBASIC1.03□□□□□ -2.24
CDH3P22223 RNA5SP153-201ENST00000516498 76 ntBASIC1.03□□□□□ -2.24
CDH3P22223 AC109810.1-201ENST00000534066 224 ntBASIC1.03□□□□□ -2.24
CDH3P22223 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.03□□□□□ -2.25
CDH3P22223 MIR103A2-201ENST00000362154 78 ntBASIC1.02□□□□□ -2.25
CDH3P22223 Y_RNA.116-201ENST00000363292 103 ntBASIC1.02□□□□□ -2.25
CDH3P22223 Y_RNA.199-201ENST00000364014 102 ntBASIC1.02□□□□□ -2.25
CDH3P22223 RNU6-923P-201ENST00000364753 107 ntBASIC1.02□□□□□ -2.25
CDH3P22223 SNORA1.2-201ENST00000365189 134 ntBASIC1.02□□□□□ -2.25
CDH3P22223 SNORA80D-201ENST00000384488 135 ntBASIC1.02□□□□□ -2.25
CDH3P22223 Y_RNA.537-201ENST00000384626 109 ntBASIC1.02□□□□□ -2.25
CDH3P22223 SNORD12-201ENST00000391002 90 ntBASIC1.02□□□□□ -2.25
CDH3P22223 RNU2-70P-201ENST00000410718 179 ntBASIC1.02□□□□□ -2.25
CDH3P22223 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CDH3P22223 RNU7-21P-201ENST00000459430 62 ntBASIC1.02□□□□□ -2.25
CDH3P22223 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
CDH3P22223 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.02□□□□□ -2.25
CDH3P22223 MIR4308-201ENST00000580634 81 ntBASIC1.02□□□□□ -2.25
CDH3P22223 MIR4791-201ENST00000607666 84 ntBASIC1.02□□□□□ -2.25
CDH3P22223 Y_RNA.37-201ENST00000362606 108 ntBASIC1.01□□□□□ -2.25
CDH3P22223 RNU6-103P-201ENST00000363686 107 ntBASIC1.01□□□□□ -2.25
CDH3P22223 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
CDH3P22223 SNORA51.10-201ENST00000384418 136 ntBASIC1.01□□□□□ -2.25
CDH3P22223 SNORA26-201ENST00000391286 122 ntBASIC1.01□□□□□ -2.25
CDH3P22223 AC002429.1-201ENST00000437672 148 ntBASIC1.01□□□□□ -2.25
CDH3P22223 AL392103.1-201ENST00000447000 198 ntBASIC1.01□□□□□ -2.25
CDH3P22223 RNU6-504P-201ENST00000516568 104 ntBASIC1.01□□□□□ -2.25
CDH3P22223 RNU6-197P-201ENST00000516680 100 ntBASIC1.01□□□□□ -2.25
CDH3P22223 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CDH3P22223 MIR4661-201ENST00000582720 75 ntBASIC1.01□□□□□ -2.25
CDH3P22223 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CDH3P22223 Y_RNA.23-201ENST00000362496 106 ntBASIC1□□□□□ -2.25
CDH3P22223 Y_RNA.191-201ENST00000363972 113 ntBASIC1□□□□□ -2.25
CDH3P22223 Y_RNA.241-201ENST00000364470 117 ntBASIC1□□□□□ -2.25
CDH3P22223 Y_RNA.508-201ENST00000384502 114 ntBASIC1□□□□□ -2.25
CDH3P22223 MIR19B1-201ENST00000384829 87 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms