Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 AL354950.2-201ENST00000617939 290 ntBASIC-1.7□□□□□ -2.68
HIST1H1DP16402 MIR8068-201ENST00000618032 68 ntBASIC-1.7□□□□□ -2.68
HIST1H1DP16402 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.71□□□□□ -2.68
HIST1H1DP16402 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.71□□□□□ -2.68
HIST1H1DP16402 SNORA49-201ENST00000386157 136 ntBASIC-1.71□□□□□ -2.68
HIST1H1DP16402 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.71□□□□□ -2.68
HIST1H1DP16402 AC023449.1-201ENST00000454464 154 ntBASIC-1.71□□□□□ -2.68
HIST1H1DP16402 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.71□□□□□ -2.68
HIST1H1DP16402 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.71□□□□□ -2.68
HIST1H1DP16402 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.71□□□□□ -2.68
HIST1H1DP16402 MIR3115-201ENST00000577915 68 ntBASIC-1.71□□□□□ -2.68
HIST1H1DP16402 AC092954.2-201ENST00000609103 430 ntBASIC-1.71□□□□□ -2.68
HIST1H1DP16402 RNU4-28P-201ENST00000364739 141 ntBASIC-1.72□□□□□ -2.68
HIST1H1DP16402 SNORD115-35-201ENST00000365122 82 ntBASIC-1.72□□□□□ -2.68
HIST1H1DP16402 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.72□□□□□ -2.68
HIST1H1DP16402 RNU6-128P-201ENST00000383976 107 ntBASIC-1.72□□□□□ -2.68
HIST1H1DP16402 MTND1P11-201ENST00000456661 876 ntBASIC-1.72□□□□□ -2.68
HIST1H1DP16402 AP003357.1-201ENST00000604497 148 ntBASIC-1.72□□□□□ -2.68
HIST1H1DP16402 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.72□□□□□ -2.68
HIST1H1DP16402 U4.1-201ENST00000620349 87 ntBASIC-1.72□□□□□ -2.68
HIST1H1DP16402 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.73□□□□□ -2.69
HIST1H1DP16402 RNA5SP133-201ENST00000363368 119 ntBASIC-1.73□□□□□ -2.69
HIST1H1DP16402 RNY1P13-201ENST00000365030 105 ntBASIC-1.73□□□□□ -2.69
HIST1H1DP16402 MTND3P8-201ENST00000412909 339 ntBASIC-1.73□□□□□ -2.69
HIST1H1DP16402 RNU7-96P-201ENST00000459535 64 ntBASIC-1.73□□□□□ -2.69
HIST1H1DP16402 AL118558.2-201ENST00000556294 238 ntBASIC-1.73□□□□□ -2.69
HIST1H1DP16402 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.73□□□□□ -2.69
HIST1H1DP16402 AL022161.1-201ENST00000604390 213 ntBASIC-1.73□□□□□ -2.69
HIST1H1DP16402 AC004223.4-201ENST00000612426 332 ntBASIC-1.73□□□□□ -2.69
HIST1H1DP16402 SNORD115-28-201ENST00000363931 81 ntBASIC-1.74□□□□□ -2.69
HIST1H1DP16402 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.74□□□□□ -2.69
HIST1H1DP16402 RNU6-30P-201ENST00000384561 107 ntBASIC-1.74□□□□□ -2.69
HIST1H1DP16402 RNU2-72P-201ENST00000411175 163 ntBASIC-1.74□□□□□ -2.69
HIST1H1DP16402 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.74□□□□□ -2.69
HIST1H1DP16402 AC098614.3-201ENST00000438957 440 ntBASIC-1.74□□□□□ -2.69
HIST1H1DP16402 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.74□□□□□ -2.69
HIST1H1DP16402 snoU83B.1-201ENST00000517136 88 ntBASIC-1.74□□□□□ -2.69
HIST1H1DP16402 AC127455.1-201ENST00000565496 145 ntBASIC-1.74□□□□□ -2.69
HIST1H1DP16402 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.74□□□□□ -2.69
HIST1H1DP16402 AC079248.2-201ENST00000623779 326 ntBASIC-1.74□□□□□ -2.69
HIST1H1DP16402 RNU6-595P-201ENST00000363944 107 ntBASIC-1.75□□□□□ -2.69
HIST1H1DP16402 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.75□□□□□ -2.69
HIST1H1DP16402 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.75□□□□□ -2.69
HIST1H1DP16402 AC093423.1-201ENST00000440817 142 ntBASIC-1.75□□□□□ -2.69
HIST1H1DP16402 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.75□□□□□ -2.69
HIST1H1DP16402 RNU7-74P-201ENST00000459104 62 ntBASIC-1.75□□□□□ -2.69
HIST1H1DP16402 SNORD11-201ENST00000459124 84 ntBASIC-1.75□□□□□ -2.69
HIST1H1DP16402 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.75□□□□□ -2.69
HIST1H1DP16402 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.75□□□□□ -2.69
HIST1H1DP16402 SNORD36C-201ENST00000516733 66 ntBASIC-1.75□□□□□ -2.69
HIST1H1DP16402 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.75□□□□□ -2.69
HIST1H1DP16402 RNU6-706P-201ENST00000517229 104 ntBASIC-1.75□□□□□ -2.69
HIST1H1DP16402 AP003733.2-201ENST00000529409 171 ntBASIC-1.75□□□□□ -2.69
HIST1H1DP16402 AC055872.1-201ENST00000570978 278 ntBASIC-1.75□□□□□ -2.69
HIST1H1DP16402 AC087752.4-201ENST00000605911 462 ntBASIC-1.75□□□□□ -2.69
HIST1H1DP16402 AC004467.1-201ENST00000615678 330 ntBASIC-1.75□□□□□ -2.69
HIST1H1DP16402 SNORD115-25-201ENST00000362619 82 ntBASIC-1.76□□□□□ -2.69
HIST1H1DP16402 RNU6-973P-201ENST00000364690 107 ntBASIC-1.76□□□□□ -2.69
HIST1H1DP16402 RNU6-905P-201ENST00000384434 107 ntBASIC-1.76□□□□□ -2.69
HIST1H1DP16402 MIR599-201ENST00000385069 95 ntBASIC-1.76□□□□□ -2.69
HIST1H1DP16402 MTATP6P13-201ENST00000438531 667 ntBASIC-1.76□□□□□ -2.69
HIST1H1DP16402 RNU6-998P-201ENST00000515894 101 ntBASIC-1.76□□□□□ -2.69
HIST1H1DP16402 MIR6854-201ENST00000614935 69 ntBASIC-1.76□□□□□ -2.69
HIST1H1DP16402 U6.109-201ENST00000636749 87 ntBASIC-1.76□□□□□ -2.69
HIST1H1DP16402 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.77□□□□□ -2.69
HIST1H1DP16402 MIR20A-201ENST00000362279 71 ntBASIC-1.77□□□□□ -2.69
HIST1H1DP16402 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.77□□□□□ -2.69
HIST1H1DP16402 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.77□□□□□ -2.69
HIST1H1DP16402 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.77□□□□□ -2.69
HIST1H1DP16402 RNU6-449P-201ENST00000383914 107 ntBASIC-1.77□□□□□ -2.69
HIST1H1DP16402 MIR517A-201ENST00000385001 87 ntBASIC-1.77□□□□□ -2.69
HIST1H1DP16402 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.77□□□□□ -2.69
HIST1H1DP16402 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.77□□□□□ -2.69
HIST1H1DP16402 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.77□□□□□ -2.69
HIST1H1DP16402 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.78□□□□□ -2.69
HIST1H1DP16402 RNU6-879P-201ENST00000364328 108 ntBASIC-1.78□□□□□ -2.69
HIST1H1DP16402 SNORD74.6-201ENST00000364796 70 ntBASIC-1.78□□□□□ -2.69
HIST1H1DP16402 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.78□□□□□ -2.69
HIST1H1DP16402 AL033528.1-201ENST00000453780 140 ntBASIC-1.78□□□□□ -2.69
HIST1H1DP16402 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.78□□□□□ -2.69
HIST1H1DP16402 MTND3P7-201ENST00000474435 343 ntBASIC-1.78□□□□□ -2.69
HIST1H1DP16402 SERF1AP1-201ENST00000514575 187 ntBASIC-1.78□□□□□ -2.69
HIST1H1DP16402 RNA5SP67-201ENST00000516422 131 ntBASIC-1.78□□□□□ -2.69
HIST1H1DP16402 SNORA40.17-201ENST00000517256 115 ntBASIC-1.78□□□□□ -2.69
HIST1H1DP16402 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.78□□□□□ -2.69
HIST1H1DP16402 MTND5P40-201ENST00000559945 246 ntBASIC-1.78□□□□□ -2.69
HIST1H1DP16402 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.78□□□□□ -2.69
HIST1H1DP16402 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.78□□□□□ -2.69
HIST1H1DP16402 MIR548AB-201ENST00000584917 84 ntBASIC-1.78□□□□□ -2.69
HIST1H1DP16402 AC018638.8-201ENST00000588755 281 ntBASIC-1.78□□□□□ -2.69
HIST1H1DP16402 RNY1P2-201ENST00000364820 117 ntBASIC-1.79□□□□□ -2.7
HIST1H1DP16402 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.79□□□□□ -2.7
HIST1H1DP16402 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.79□□□□□ -2.7
HIST1H1DP16402 MTND1P27-201ENST00000451117 902 ntBASIC-1.79□□□□□ -2.7
HIST1H1DP16402 MIR548AG2-201ENST00000581228 64 ntBASIC-1.79□□□□□ -2.7
HIST1H1DP16402 AL138960.2-201ENST00000625145 535 ntBASIC-1.79□□□□□ -2.7
HIST1H1DP16402 RNU4-50P-201ENST00000364361 141 ntBASIC-1.8□□□□□ -2.7
HIST1H1DP16402 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.8□□□□□ -2.7
HIST1H1DP16402 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.8□□□□□ -2.7
HIST1H1DP16402 RNU6-38P-201ENST00000384085 107 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms