Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC027119.1-201ENST00000440877 241 ntBASIC1.34□□□□□ -2.19
CDH1P12830 SNORD123-201ENST00000459473 70 ntBASIC1.34□□□□□ -2.19
CDH1P12830 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.34□□□□□ -2.19
CDH1P12830 SNORA18.7-201ENST00000516910 131 ntBASIC1.34□□□□□ -2.19
CDH1P12830 RNU6-255P-201ENST00000516957 105 ntBASIC1.34□□□□□ -2.19
CDH1P12830 RNU1-92P-201ENST00000517017 135 ntBASIC1.34□□□□□ -2.19
CDH1P12830 MTND5P41-201ENST00000517498 206 ntBASIC1.34□□□□□ -2.19
CDH1P12830 MIR3129-201ENST00000581095 76 ntBASIC1.34□□□□□ -2.19
CDH1P12830 DNAJC19P2-201ENST00000593340 302 ntBASIC1.34□□□□□ -2.19
CDH1P12830 AC134878.1-201ENST00000619901 243 ntBASIC1.34□□□□□ -2.19
CDH1P12830 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
CDH1P12830 Y_RNA.8-201ENST00000362353 102 ntBASIC1.33□□□□□ -2.2
CDH1P12830 RNU6-818P-201ENST00000364837 108 ntBASIC1.33□□□□□ -2.2
CDH1P12830 RNU6-1336P-201ENST00000383886 109 ntBASIC1.33□□□□□ -2.2
CDH1P12830 RNU6-1062P-201ENST00000383908 107 ntBASIC1.33□□□□□ -2.2
CDH1P12830 SNORD116-18-201ENST00000383961 92 ntBASIC1.33□□□□□ -2.2
CDH1P12830 RNU6-482P-201ENST00000391068 107 ntBASIC1.33□□□□□ -2.2
CDH1P12830 U8.17-201ENST00000391292 132 ntBASIC1.33□□□□□ -2.2
CDH1P12830 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.33□□□□□ -2.2
CDH1P12830 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.33□□□□□ -2.2
CDH1P12830 RPS29P23-201ENST00000458635 123 ntBASIC1.33□□□□□ -2.2
CDH1P12830 AC079140.2-201ENST00000506193 142 ntBASIC1.33□□□□□ -2.2
CDH1P12830 RNU6-922P-201ENST00000516753 99 ntBASIC1.33□□□□□ -2.2
CDH1P12830 SNORA74.3-201ENST00000517108 154 ntBASIC1.33□□□□□ -2.2
CDH1P12830 RNU7-181P-201ENST00000517234 74 ntBASIC1.33□□□□□ -2.2
CDH1P12830 AC019176.1-201ENST00000518519 225 ntBASIC1.33□□□□□ -2.2
CDH1P12830 AL513534.2-201ENST00000603836 250 ntBASIC1.33□□□□□ -2.2
CDH1P12830 MIR376A2-201ENST00000636782 80 ntBASIC1.33□□□□□ -2.2
CDH1P12830 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CDH1P12830 Y_RNA.140-201ENST00000363474 103 ntBASIC1.32□□□□□ -2.2
CDH1P12830 Y_RNA.170-201ENST00000363746 110 ntBASIC1.32□□□□□ -2.2
CDH1P12830 SNORA25.7-201ENST00000364375 127 ntBASIC1.32□□□□□ -2.2
CDH1P12830 RNU6-1082P-201ENST00000364574 107 ntBASIC1.32□□□□□ -2.2
CDH1P12830 RNU6-1292P-201ENST00000383856 107 ntBASIC1.32□□□□□ -2.2
CDH1P12830 RNU6-449P-201ENST00000383914 107 ntBASIC1.32□□□□□ -2.2
CDH1P12830 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
CDH1P12830 RNU1-78P-201ENST00000391248 165 ntBASIC1.32□□□□□ -2.2
CDH1P12830 AL451046.2-201ENST00000403074 277 ntBASIC1.32□□□□□ -2.2
CDH1P12830 AC087499.4-201ENST00000448505 178 ntBASIC1.32□□□□□ -2.2
CDH1P12830 RNU6-322P-201ENST00000516010 103 ntBASIC1.32□□□□□ -2.2
CDH1P12830 MIR3646-201ENST00000578301 84 ntBASIC1.32□□□□□ -2.2
CDH1P12830 MIR548AR-201ENST00000582191 57 ntBASIC1.32□□□□□ -2.2
CDH1P12830 Y_RNA.410-201ENST00000383992 113 ntBASIC1.31□□□□□ -2.2
CDH1P12830 MIR624-201ENST00000385217 97 ntBASIC1.31□□□□□ -2.2
CDH1P12830 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
CDH1P12830 SNORD28B-201ENST00000390993 75 ntBASIC1.31□□□□□ -2.2
CDH1P12830 SNX2P2-201ENST00000424553 323 ntBASIC1.31□□□□□ -2.2
CDH1P12830 SNORD36C-201ENST00000516733 66 ntBASIC1.31□□□□□ -2.2
CDH1P12830 MIR4422-201ENST00000581938 83 ntBASIC1.31□□□□□ -2.2
CDH1P12830 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.31□□□□□ -2.2
CDH1P12830 MIR4769-201ENST00000584126 77 ntBASIC1.31□□□□□ -2.2
CDH1P12830 AL512598.1-201ENST00000610158 273 ntBASIC1.31□□□□□ -2.2
CDH1P12830 Y_RNA.778-201ENST00000620203 90 ntBASIC1.31□□□□□ -2.2
CDH1P12830 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.31□□□□□ -2.2
CDH1P12830 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.31□□□□□ -2.2
CDH1P12830 MIR6844-201ENST00000637122 62 ntBASIC1.31□□□□□ -2.2
CDH1P12830 SNORD33-201ENST00000362761 85 ntBASIC1.3□□□□□ -2.2
CDH1P12830 RNY1P11-201ENST00000363759 113 ntBASIC1.3□□□□□ -2.2
CDH1P12830 RNU6-151P-201ENST00000364158 107 ntBASIC1.3□□□□□ -2.2
CDH1P12830 Y_RNA.494-201ENST00000384432 111 ntBASIC1.3□□□□□ -2.2
CDH1P12830 SNORA75.5-201ENST00000391291 81 ntBASIC1.3□□□□□ -2.2
CDH1P12830 RNU6-588P-201ENST00000410281 105 ntBASIC1.3□□□□□ -2.2
CDH1P12830 RNA5SP127-201ENST00000411051 133 ntBASIC1.3□□□□□ -2.2
CDH1P12830 RPS27P16-201ENST00000425758 201 ntBASIC1.3□□□□□ -2.2
CDH1P12830 AC245517.4-201ENST00000448601 281 ntBASIC1.3□□□□□ -2.2
CDH1P12830 RNU7-95P-201ENST00000459222 64 ntBASIC1.3□□□□□ -2.2
CDH1P12830 RNU7-200P-201ENST00000516105 62 ntBASIC1.3□□□□□ -2.2
CDH1P12830 AP003484.1-201ENST00000530974 250 ntBASIC1.3□□□□□ -2.2
CDH1P12830 GHRLOS.1-201ENST00000610995 70 ntBASIC1.3□□□□□ -2.2
CDH1P12830 RNU6-1189P-201ENST00000383958 107 ntBASIC1.29□□□□□ -2.2
CDH1P12830 Y_RNA.506-201ENST00000384494 102 ntBASIC1.29□□□□□ -2.2
CDH1P12830 RPS26P48-201ENST00000491713 339 ntBASIC1.29□□□□□ -2.2
CDH1P12830 RNA5SP445-201ENST00000515889 115 ntBASIC1.29□□□□□ -2.2
CDH1P12830 RNU2-13P-201ENST00000515909 113 ntBASIC1.29□□□□□ -2.2
CDH1P12830 RNU7-43P-201ENST00000516554 64 ntBASIC1.29□□□□□ -2.2
CDH1P12830 AC068338.1-201ENST00000565567 176 ntBASIC1.29□□□□□ -2.2
CDH1P12830 MIR3937-201ENST00000580135 106 ntBASIC1.29□□□□□ -2.2
CDH1P12830 MIR4764-201ENST00000580680 88 ntBASIC1.29□□□□□ -2.2
CDH1P12830 MIR5197-201ENST00000583721 112 ntBASIC1.29□□□□□ -2.2
CDH1P12830 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.29□□□□□ -2.2
CDH1P12830 MTND1P7-201ENST00000632801 297 ntBASIC1.29□□□□□ -2.2
CDH1P12830 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
CDH1P12830 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-34-201ENST00000362441 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-12-201ENST00000362583 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-29-201ENST00000362834 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-9-201ENST00000362912 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-21-201ENST00000362963 81 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-14-201ENST00000363090 81 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-13-201ENST00000363358 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-41-201ENST00000363608 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-11-201ENST00000363616 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-5-201ENST00000363633 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-39-201ENST00000363694 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-4-201ENST00000363810 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-16-201ENST00000363887 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-6-201ENST00000363942 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-42-201ENST00000364273 82 ntBASIC1.28□□□□□ -2.2
CDH1P12830 Y_RNA.241-201ENST00000364470 117 ntBASIC1.28□□□□□ -2.2
CDH1P12830 SNORD115-15-201ENST00000364809 81 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms