Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.46□□□□□ -2.34
COL11A1P12107 Y_RNA.16-201ENST00000362421 102 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.105-201ENST00000363182 111 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 RNU4-80P-201ENST00000363200 141 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.202-201ENST00000364083 110 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 RNY4P3-201ENST00000365254 95 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.380-201ENST00000365663 111 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 RNU6-484P-201ENST00000384016 107 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 RNU6-763P-201ENST00000390865 106 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 U8.17-201ENST00000391292 132 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 MIR548O-201ENST00000408583 114 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
COL11A1P12107 SNORA70.22-201ENST00000517160 124 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 AL008718.3-201ENST00000610217 321 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.19-201ENST00000362462 99 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.47-201ENST00000362697 108 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.82-201ENST00000363000 102 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.92-201ENST00000363043 102 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.235-201ENST00000364412 102 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.306-201ENST00000365015 102 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.308-201ENST00000365043 101 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.312-201ENST00000365089 102 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.322-201ENST00000365151 102 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 RNU6-290P-201ENST00000365212 101 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 RNU6-728P-201ENST00000365375 104 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 RNU6-713P-201ENST00000384761 107 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 MIR548A2-201ENST00000384956 97 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 MIR452-201ENST00000385020 85 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 AC245047.8-201ENST00000456455 284 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.650-201ENST00000459002 102 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.637-201ENST00000459424 114 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 RNA5SP255-201ENST00000516370 107 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 RNU6-453P-201ENST00000516819 85 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.777-201ENST00000516982 102 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 RNU7-181P-201ENST00000517234 74 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 MIR4719-201ENST00000585233 84 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.771-201ENST00000598668 102 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.45□□□□□ -2.34
COL11A1P12107 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 AC106800.4-201ENST00000614905 153 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.789-201ENST00000622480 102 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 snoU18.1-201ENST00000629629 71 ntBASIC0.45□□□□□ -2.34
COL11A1P12107 Y_RNA.66-201ENST00000362862 102 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 SNORA25.3-201ENST00000363205 127 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 RNU6-238P-201ENST00000363313 106 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 SNORD114-24-201ENST00000365029 72 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 RNU6-396P-201ENST00000365369 105 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 Y_RNA.363-201ENST00000365529 113 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 SNORA2A-201ENST00000383885 135 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 SNORA40.5-201ENST00000391061 128 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 MTCO2P33-201ENST00000402100 465 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 AL590004.1-201ENST00000405321 300 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 SNORD111-201ENST00000408139 94 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 RNU6-651P-201ENST00000411040 105 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 RNU6-602P-201ENST00000411155 105 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 AC006461.1-201ENST00000412637 326 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.44□□□□□ -2.34
COL11A1P12107 SCARNA8-201ENST00000515924 131 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 RNU6-126P-201ENST00000516685 103 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 RNU2-31P-201ENST00000516954 155 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 SNORA74.3-201ENST00000517108 154 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 MIR4778-201ENST00000577635 80 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 MIR4423-201ENST00000580922 80 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 AL355297.3-201ENST00000604082 446 ntBASIC0.44□□□□□ -2.34
COL11A1P12107 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.43□□□□□ -2.34
COL11A1P12107 RNU4-10P-201ENST00000364383 140 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 SNORD113.3-201ENST00000364630 78 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 Y_RNA.330-201ENST00000365230 109 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 RNY3P5-201ENST00000384127 102 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 RNU6-102P-201ENST00000384485 104 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 MT-TN-201ENST00000387400 73 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 RNU6-1203P-201ENST00000410703 110 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 AL022718.1-201ENST00000412004 84 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.43□□□□□ -2.34
COL11A1P12107 CYCTP-201ENST00000504253 315 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.43□□□□□ -2.34
COL11A1P12107 AC008507.4-201ENST00000585464 127 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 RNU6-1209P-201ENST00000363655 107 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 RNU6-268P-201ENST00000364174 107 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 Y_RNA.275-201ENST00000364726 110 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 Y_RNA.286-201ENST00000364813 102 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 SNORA1.2-201ENST00000365189 134 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 RNU6-1065P-201ENST00000384513 106 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 MT-TW-201ENST00000387382 68 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 AL603910.2-201ENST00000407268 136 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 MIR1302-6-201ENST00000408466 90 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 MIR1302-7-201ENST00000408841 72 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 RNA5SP25-201ENST00000410815 110 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 AC063976.4-201ENST00000421971 163 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 snoU13.19-201ENST00000459148 104 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 snoU13.21-201ENST00000459368 105 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.43□□□□□ -2.34
COL11A1P12107 MTCO2P24-201ENST00000515611 426 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 RNU7-41P-201ENST00000515917 61 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 RNU6-365P-201ENST00000517113 106 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 AP003716.2-201ENST00000528260 108 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 AC007751.1-201ENST00000529260 376 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 Y_RNA.812-201ENST00000610788 101 ntBASIC0.43□□□□□ -2.34
COL11A1P12107 Y_RNA.784-201ENST00000613803 101 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms