Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MIR1245B-201ENST00000636115 69 ntBASIC2.8□□□□□ -1.96
RARAP10276 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
RARAP10276 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
RARAP10276 RNU6-832P-201ENST00000363319 107 ntBASIC2.79□□□□□ -1.96
RARAP10276 RNU1-91P-201ENST00000364746 163 ntBASIC2.79□□□□□ -1.96
RARAP10276 Y_RNA.290-201ENST00000364879 114 ntBASIC2.79□□□□□ -1.96
RARAP10276 RNU6-573P-201ENST00000383938 106 ntBASIC2.79□□□□□ -1.96
RARAP10276 RNU6-1031P-201ENST00000384773 107 ntBASIC2.79□□□□□ -1.96
RARAP10276 RNU6-1275P-201ENST00000391087 107 ntBASIC2.79□□□□□ -1.96
RARAP10276 RNU4-69P-201ENST00000410677 143 ntBASIC2.79□□□□□ -1.96
RARAP10276 AL353813.1-201ENST00000440700 253 ntBASIC2.79□□□□□ -1.96
RARAP10276 Z96811.1-201ENST00000445880 108 ntBASIC2.79□□□□□ -1.96
RARAP10276 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.79□□□□□ -1.96
RARAP10276 RNA5SP367-201ENST00000516557 118 ntBASIC2.79□□□□□ -1.96
RARAP10276 MIR4435-1-201ENST00000582552 80 ntBASIC2.79□□□□□ -1.96
RARAP10276 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.79□□□□□ -1.96
RARAP10276 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.79□□□□□ -1.96
RARAP10276 MIR494-201ENST00000349529 81 ntBASIC2.78□□□□□ -1.96
RARAP10276 SNORD115-2-201ENST00000362842 82 ntBASIC2.78□□□□□ -1.96
RARAP10276 SNORD115-20-201ENST00000365099 82 ntBASIC2.78□□□□□ -1.96
RARAP10276 MIR452-201ENST00000385020 85 ntBASIC2.78□□□□□ -1.96
RARAP10276 MIR605-201ENST00000385078 83 ntBASIC2.78□□□□□ -1.96
RARAP10276 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.78□□□□□ -1.96
RARAP10276 RNU11-3P-201ENST00000391111 133 ntBASIC2.78□□□□□ -1.96
RARAP10276 MIR1283-2-201ENST00000408621 87 ntBASIC2.78□□□□□ -1.96
RARAP10276 RN7SKP192-201ENST00000411291 327 ntBASIC2.78□□□□□ -1.96
RARAP10276 RNU7-61P-201ENST00000515897 61 ntBASIC2.78□□□□□ -1.96
RARAP10276 RPPH1-2P-201ENST00000516688 293 ntBASIC2.78□□□□□ -1.96
RARAP10276 RNU6-56P-201ENST00000516986 93 ntBASIC2.78□□□□□ -1.96
RARAP10276 MIR4635-201ENST00000583759 79 ntBASIC2.78□□□□□ -1.96
RARAP10276 MIR7106-201ENST00000612419 65 ntBASIC2.78□□□□□ -1.96
RARAP10276 MIR6841-201ENST00000637129 72 ntBASIC2.78□□□□□ -1.96
RARAP10276 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
RARAP10276 RNU6-170P-201ENST00000362832 104 ntBASIC2.77□□□□□ -1.97
RARAP10276 Y_RNA.370-201ENST00000365589 108 ntBASIC2.77□□□□□ -1.97
RARAP10276 DEFA7P-201ENST00000382676 285 ntBASIC2.77□□□□□ -1.97
RARAP10276 SNORA70.7-201ENST00000384159 133 ntBASIC2.77□□□□□ -1.97
RARAP10276 RNU6-1152P-201ENST00000384576 107 ntBASIC2.77□□□□□ -1.97
RARAP10276 MIR504-201ENST00000385065 83 ntBASIC2.77□□□□□ -1.97
RARAP10276 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RARAP10276 RNA5SP210-201ENST00000391034 120 ntBASIC2.77□□□□□ -1.97
RARAP10276 AC096949.1-201ENST00000412047 152 ntBASIC2.77□□□□□ -1.97
RARAP10276 AC004941.2-201ENST00000427009 228 ntBASIC2.77□□□□□ -1.97
RARAP10276 RNU7-26P-201ENST00000458980 63 ntBASIC2.77□□□□□ -1.97
RARAP10276 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.77□□□□□ -1.97
RARAP10276 RN7SKP132-201ENST00000516001 208 ntBASIC2.77□□□□□ -1.97
RARAP10276 RNU6-795P-201ENST00000516323 103 ntBASIC2.77□□□□□ -1.97
RARAP10276 RNA5SP137-201ENST00000516833 135 ntBASIC2.77□□□□□ -1.97
RARAP10276 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.77□□□□□ -1.97
RARAP10276 AC012531.4-201ENST00000616509 177 ntBASIC2.77□□□□□ -1.97
RARAP10276 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RARAP10276 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
RARAP10276 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RARAP10276 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RARAP10276 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RARAP10276 SNORA22.1-201ENST00000362701 134 ntBASIC2.76□□□□□ -1.97
RARAP10276 Y_RNA.470-201ENST00000384307 117 ntBASIC2.76□□□□□ -1.97
RARAP10276 Y_RNA.593-201ENST00000410292 98 ntBASIC2.76□□□□□ -1.97
RARAP10276 SCARNA16.3-201ENST00000516595 184 ntBASIC2.76□□□□□ -1.97
RARAP10276 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RARAP10276 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RARAP10276 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RARAP10276 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RARAP10276 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RARAP10276 RNY1P10-201ENST00000363268 113 ntBASIC2.75□□□□□ -1.97
RARAP10276 SNORA80A-201ENST00000363922 136 ntBASIC2.75□□□□□ -1.97
RARAP10276 SNORA24-201ENST00000384096 131 ntBASIC2.75□□□□□ -1.97
RARAP10276 MIR9-1-201ENST00000385198 89 ntBASIC2.75□□□□□ -1.97
RARAP10276 MIR136-201ENST00000385207 82 ntBASIC2.75□□□□□ -1.97
RARAP10276 RNU6-679P-201ENST00000391003 106 ntBASIC2.75□□□□□ -1.97
RARAP10276 RNU6-644P-201ENST00000391155 98 ntBASIC2.75□□□□□ -1.97
RARAP10276 SNORA26.6-201ENST00000391256 115 ntBASIC2.75□□□□□ -1.97
RARAP10276 AC105272.1-201ENST00000438604 198 ntBASIC2.75□□□□□ -1.97
RARAP10276 AC093850.1-201ENST00000454121 251 ntBASIC2.75□□□□□ -1.97
RARAP10276 MIR1270-201ENST00000459320 83 ntBASIC2.75□□□□□ -1.97
RARAP10276 RNU2-13P-201ENST00000515909 113 ntBASIC2.75□□□□□ -1.97
RARAP10276 RNVU1-2-201ENST00000516326 135 ntBASIC2.75□□□□□ -1.97
RARAP10276 RNU7-53P-201ENST00000516705 60 ntBASIC2.75□□□□□ -1.97
RARAP10276 RNU6-958P-201ENST00000516995 106 ntBASIC2.75□□□□□ -1.97
RARAP10276 MIR3152-201ENST00000579801 74 ntBASIC2.75□□□□□ -1.97
RARAP10276 MIR548AE2-201ENST00000583456 67 ntBASIC2.75□□□□□ -1.97
RARAP10276 AL033523.1-201ENST00000605153 153 ntBASIC2.75□□□□□ -1.97
RARAP10276 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
RARAP10276 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RARAP10276 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
RARAP10276 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.74□□□□□ -1.97
RARAP10276 MIR6073-201ENST00000352083 89 ntBASIC2.74□□□□□ -1.97
RARAP10276 Y_RNA.17-201ENST00000362433 111 ntBASIC2.74□□□□□ -1.97
RARAP10276 RNU6-616P-201ENST00000384353 107 ntBASIC2.74□□□□□ -1.97
RARAP10276 SNORA7.5-201ENST00000410672 110 ntBASIC2.74□□□□□ -1.97
RARAP10276 HMGN2P35-201ENST00000412164 270 ntBASIC2.74□□□□□ -1.97
RARAP10276 HMGN2P3-201ENST00000433603 273 ntBASIC2.74□□□□□ -1.97
RARAP10276 HMGN2P5-201ENST00000436882 273 ntBASIC2.74□□□□□ -1.97
RARAP10276 RPS29P29-201ENST00000456396 171 ntBASIC2.74□□□□□ -1.97
RARAP10276 RNU7-67P-201ENST00000459003 62 ntBASIC2.74□□□□□ -1.97
RARAP10276 RNA5SP33-201ENST00000516687 98 ntBASIC2.74□□□□□ -1.97
RARAP10276 U7.3-201ENST00000616123 62 ntBASIC2.74□□□□□ -1.97
RARAP10276 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RARAP10276 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RARAP10276 SNORD77B-201ENST00000391112 67 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms