Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RNU6-888P-201ENST00000363010 101 ntBASIC1.33□□□□□ -2.2
CD48P09326 Y_RNA.91-201ENST00000363042 107 ntBASIC1.33□□□□□ -2.2
CD48P09326 RNU6-187P-201ENST00000384139 106 ntBASIC1.33□□□□□ -2.2
CD48P09326 RNU6-125P-201ENST00000384505 107 ntBASIC1.33□□□□□ -2.2
CD48P09326 MIR452-201ENST00000385020 85 ntBASIC1.33□□□□□ -2.2
CD48P09326 MIR653-201ENST00000385279 96 ntBASIC1.33□□□□□ -2.2
CD48P09326 AC015922.2-201ENST00000435593 184 ntBASIC1.33□□□□□ -2.2
CD48P09326 AC093850.1-201ENST00000454121 251 ntBASIC1.33□□□□□ -2.2
CD48P09326 MIR4421-201ENST00000578133 69 ntBASIC1.33□□□□□ -2.2
CD48P09326 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CD48P09326 MIR302D-201ENST00000362275 68 ntBASIC1.32□□□□□ -2.2
CD48P09326 RNU6-199P-201ENST00000362954 107 ntBASIC1.32□□□□□ -2.2
CD48P09326 RNU6-978P-201ENST00000364371 103 ntBASIC1.32□□□□□ -2.2
CD48P09326 Y_RNA.272-201ENST00000364696 102 ntBASIC1.32□□□□□ -2.2
CD48P09326 RNU6-597P-201ENST00000365620 102 ntBASIC1.32□□□□□ -2.2
CD48P09326 Y_RNA.398-201ENST00000383952 99 ntBASIC1.32□□□□□ -2.2
CD48P09326 SNORD61-201ENST00000384252 73 ntBASIC1.32□□□□□ -2.2
CD48P09326 MIR802-201ENST00000390235 94 ntBASIC1.32□□□□□ -2.2
CD48P09326 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
CD48P09326 AC107027.2-201ENST00000512197 115 ntBASIC1.32□□□□□ -2.2
CD48P09326 Y_RNA.666-201ENST00000516187 112 ntBASIC1.32□□□□□ -2.2
CD48P09326 SNORD116-25-201ENST00000516517 92 ntBASIC1.32□□□□□ -2.2
CD48P09326 AC090142.3-201ENST00000519012 385 ntBASIC1.32□□□□□ -2.2
CD48P09326 SUMO2P16-201ENST00000519475 264 ntBASIC1.32□□□□□ -2.2
CD48P09326 AC090821.2-201ENST00000523552 176 ntBASIC1.32□□□□□ -2.2
CD48P09326 MIR3198-2-201ENST00000577868 80 ntBASIC1.32□□□□□ -2.2
CD48P09326 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
CD48P09326 MIR3658-201ENST00000636291 56 ntBASIC1.32□□□□□ -2.2
CD48P09326 Y_RNA.327-201ENST00000365201 102 ntBASIC1.31□□□□□ -2.2
CD48P09326 Y_RNA.337-201ENST00000365312 102 ntBASIC1.31□□□□□ -2.2
CD48P09326 SNORA2.2-201ENST00000365473 135 ntBASIC1.31□□□□□ -2.2
CD48P09326 SNORD38C-201ENST00000384381 69 ntBASIC1.31□□□□□ -2.2
CD48P09326 MIR548A2-201ENST00000384956 97 ntBASIC1.31□□□□□ -2.2
CD48P09326 AL603908.1-201ENST00000406098 201 ntBASIC1.31□□□□□ -2.2
CD48P09326 RNU6-346P-201ENST00000516288 111 ntBASIC1.31□□□□□ -2.2
CD48P09326 AC007751.1-201ENST00000529260 376 ntBASIC1.31□□□□□ -2.2
CD48P09326 MIR4778-201ENST00000577635 80 ntBASIC1.31□□□□□ -2.2
CD48P09326 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.31□□□□□ -2.2
CD48P09326 SNORA4-201ENST00000584302 138 ntBASIC1.31□□□□□ -2.2
CD48P09326 MIR6504-201ENST00000613520 61 ntBASIC1.31□□□□□ -2.2
CD48P09326 RNU6-1336P-201ENST00000383886 109 ntBASIC1.3□□□□□ -2.2
CD48P09326 Y_RNA.547-201ENST00000384654 119 ntBASIC1.3□□□□□ -2.2
CD48P09326 MIR526A1-201ENST00000384897 85 ntBASIC1.3□□□□□ -2.2
CD48P09326 MIR513A1-201ENST00000385138 129 ntBASIC1.3□□□□□ -2.2
CD48P09326 AC006461.1-201ENST00000412637 326 ntBASIC1.3□□□□□ -2.2
CD48P09326 AC009474.2-201ENST00000451383 136 ntBASIC1.3□□□□□ -2.2
CD48P09326 snoU13.9-201ENST00000458927 103 ntBASIC1.3□□□□□ -2.2
CD48P09326 AC008834.1-201ENST00000511612 175 ntBASIC1.3□□□□□ -2.2
CD48P09326 RNU6-693P-201ENST00000516134 107 ntBASIC1.3□□□□□ -2.2
CD48P09326 AC090049.2-201ENST00000550377 109 ntBASIC1.3□□□□□ -2.2
CD48P09326 MIR3646-201ENST00000578301 84 ntBASIC1.3□□□□□ -2.2
CD48P09326 MIR3144-201ENST00000579460 79 ntBASIC1.3□□□□□ -2.2
CD48P09326 MIR3133-201ENST00000583157 78 ntBASIC1.3□□□□□ -2.2
CD48P09326 AL365205.2-201ENST00000594586 68 ntBASIC1.3□□□□□ -2.2
CD48P09326 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.3□□□□□ -2.2
CD48P09326 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.3□□□□□ -2.2
CD48P09326 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.29□□□□□ -2.2
CD48P09326 Y_RNA.8-201ENST00000362353 102 ntBASIC1.29□□□□□ -2.2
CD48P09326 Y_RNA.191-201ENST00000363972 113 ntBASIC1.29□□□□□ -2.2
CD48P09326 RNU6-392P-201ENST00000364926 101 ntBASIC1.29□□□□□ -2.2
CD48P09326 SNORD1A-201ENST00000364968 72 ntBASIC1.29□□□□□ -2.2
CD48P09326 RNU6-1292P-201ENST00000383856 107 ntBASIC1.29□□□□□ -2.2
CD48P09326 Y_RNA.393-201ENST00000383936 102 ntBASIC1.29□□□□□ -2.2
CD48P09326 Y_RNA.542-201ENST00000384641 111 ntBASIC1.29□□□□□ -2.2
CD48P09326 MIR518F-201ENST00000384973 87 ntBASIC1.29□□□□□ -2.2
CD48P09326 MIR136-201ENST00000385207 82 ntBASIC1.29□□□□□ -2.2
CD48P09326 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CD48P09326 MIR548O-201ENST00000408583 114 ntBASIC1.29□□□□□ -2.2
CD48P09326 MIR1276-201ENST00000408707 83 ntBASIC1.29□□□□□ -2.2
CD48P09326 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.29□□□□□ -2.2
CD48P09326 RNU4-57P-201ENST00000515980 135 ntBASIC1.29□□□□□ -2.2
CD48P09326 RNU7-200P-201ENST00000516105 62 ntBASIC1.29□□□□□ -2.2
CD48P09326 AL513534.2-201ENST00000603836 250 ntBASIC1.29□□□□□ -2.2
CD48P09326 ICE2P2-201ENST00000483823 2787 ntBASIC1.28□□□□□ -2.2
CD48P09326 SNORD33-201ENST00000362761 85 ntBASIC1.28□□□□□ -2.2
CD48P09326 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.28□□□□□ -2.2
CD48P09326 AC087499.4-201ENST00000448505 178 ntBASIC1.28□□□□□ -2.2
CD48P09326 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.28□□□□□ -2.2
CD48P09326 RNU6-917P-201ENST00000516294 104 ntBASIC1.28□□□□□ -2.2
CD48P09326 RNU7-25P-201ENST00000516544 62 ntBASIC1.28□□□□□ -2.2
CD48P09326 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.28□□□□□ -2.2
CD48P09326 DNAJC19P2-201ENST00000593340 302 ntBASIC1.28□□□□□ -2.2
CD48P09326 AL078603.1-201ENST00000603824 313 ntBASIC1.28□□□□□ -2.2
CD48P09326 AC134878.1-201ENST00000619901 243 ntBASIC1.28□□□□□ -2.2
CD48P09326 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.28□□□□□ -2.2
CD48P09326 AL161722.3-201ENST00000605789 2983 ntBASIC1.28□□□□□ -2.2
CD48P09326 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
CD48P09326 SNORA7.1-201ENST00000363750 139 ntBASIC1.27□□□□□ -2.21
CD48P09326 SNORD115-28-201ENST00000363931 81 ntBASIC1.27□□□□□ -2.21
CD48P09326 RNA5SP259-201ENST00000365541 109 ntBASIC1.27□□□□□ -2.21
CD48P09326 SNORD116-18-201ENST00000383961 92 ntBASIC1.27□□□□□ -2.21
CD48P09326 RNU6-42P-201ENST00000384165 107 ntBASIC1.27□□□□□ -2.21
CD48P09326 RNU6-768P-201ENST00000384683 107 ntBASIC1.27□□□□□ -2.21
CD48P09326 MIR613-201ENST00000385248 95 ntBASIC1.27□□□□□ -2.21
CD48P09326 RNU1-78P-201ENST00000391248 165 ntBASIC1.27□□□□□ -2.21
CD48P09326 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.27□□□□□ -2.21
CD48P09326 AC005908.1-201ENST00000468701 347 ntBASIC1.27□□□□□ -2.21
CD48P09326 RNA5SP272-201ENST00000516095 111 ntBASIC1.27□□□□□ -2.21
CD48P09326 RNA5SP480-201ENST00000516840 109 ntBASIC1.27□□□□□ -2.21
CD48P09326 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms