Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RNU6-46P-201ENST00000383860 107 ntBASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 MIR548I3-201ENST00000408378 149 ntBASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 RNA5SP237-201ENST00000410414 113 ntBASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 AC024067.1-201ENST00000426199 223 ntBASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 RNU7-169P-201ENST00000459456 61 ntBASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 RNU6-120P-201ENST00000516077 103 ntBASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 RNU6-314P-201ENST00000516574 104 ntBASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 RNU2-60P-201ENST00000517290 128 ntBASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 MIR3145-201ENST00000580727 82 ntBASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 AC005357.1-201ENST00000588399 301 ntBASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 AC092447.9-201ENST00000603395 144 ntBASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 AL442067.1-201ENST00000613261 223 ntBASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 AC015540.1-201ENST00000615828 501 ntBASIC-0.53□□□□□ -2.49
HLA-DQB2P05538 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.54□□□□□ -2.5
HLA-DQB2P05538 RNY3P11-201ENST00000364153 102 ntBASIC-0.54□□□□□ -2.5
HLA-DQB2P05538 RNU6-708P-201ENST00000384217 107 ntBASIC-0.54□□□□□ -2.5
HLA-DQB2P05538 U8.15-201ENST00000390947 134 ntBASIC-0.54□□□□□ -2.5
HLA-DQB2P05538 RNU2-14P-201ENST00000411053 191 ntBASIC-0.54□□□□□ -2.5
HLA-DQB2P05538 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.54□□□□□ -2.5
HLA-DQB2P05538 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.54□□□□□ -2.5
HLA-DQB2P05538 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.54□□□□□ -2.5
HLA-DQB2P05538 AC122108.2-201ENST00000611946 526 ntBASIC-0.54□□□□□ -2.5
HLA-DQB2P05538 AL662814.1-201ENST00000617364 121 ntBASIC-0.54□□□□□ -2.5
HLA-DQB2P05538 TPTEP1-208ENST00000636884 213 ntBASIC-0.54□□□□□ -2.5
HLA-DQB2P05538 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.55□□□□□ -2.5
HLA-DQB2P05538 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.55□□□□□ -2.5
HLA-DQB2P05538 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.55□□□□□ -2.5
HLA-DQB2P05538 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.55□□□□□ -2.5
HLA-DQB2P05538 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.55□□□□□ -2.5
HLA-DQB2P05538 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.55□□□□□ -2.5
HLA-DQB2P05538 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.55□□□□□ -2.5
HLA-DQB2P05538 AC096949.1-201ENST00000412047 152 ntBASIC-0.55□□□□□ -2.5
HLA-DQB2P05538 RNU2-11P-201ENST00000459191 187 ntBASIC-0.55□□□□□ -2.5
HLA-DQB2P05538 RPS29P25-201ENST00000481709 171 ntBASIC-0.55□□□□□ -2.5
HLA-DQB2P05538 SNORD36C-201ENST00000516733 66 ntBASIC-0.55□□□□□ -2.5
HLA-DQB2P05538 RNU7-149P-201ENST00000516739 59 ntBASIC-0.55□□□□□ -2.5
HLA-DQB2P05538 MIR4491-201ENST00000581087 68 ntBASIC-0.55□□□□□ -2.5
HLA-DQB2P05538 SNORA70.25-201ENST00000612741 95 ntBASIC-0.55□□□□□ -2.5
HLA-DQB2P05538 MIR6514-201ENST00000622549 70 ntBASIC-0.55□□□□□ -2.5
HLA-DQB2P05538 SNORD14C-201ENST00000365382 88 ntBASIC-0.56□□□□□ -2.5
HLA-DQB2P05538 RNU2-16P-201ENST00000410712 136 ntBASIC-0.56□□□□□ -2.5
HLA-DQB2P05538 AC023449.1-201ENST00000454464 154 ntBASIC-0.56□□□□□ -2.5
HLA-DQB2P05538 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.56□□□□□ -2.5
HLA-DQB2P05538 IGLVI-20-201ENST00000519296 130 ntBASIC-0.56□□□□□ -2.5
HLA-DQB2P05538 AC011921.3-201ENST00000605540 361 ntBASIC-0.56□□□□□ -2.5
HLA-DQB2P05538 MIR6759-201ENST00000638110 65 ntBASIC-0.56□□□□□ -2.5
HLA-DQB2P05538 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.57□□□□□ -2.5
HLA-DQB2P05538 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.57□□□□□ -2.5
HLA-DQB2P05538 RNU6-597P-201ENST00000365620 102 ntBASIC-0.57□□□□□ -2.5
HLA-DQB2P05538 SNORA72.4-201ENST00000384174 132 ntBASIC-0.57□□□□□ -2.5
HLA-DQB2P05538 SNORD77.3-201ENST00000391113 65 ntBASIC-0.57□□□□□ -2.5
HLA-DQB2P05538 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.57□□□□□ -2.5
HLA-DQB2P05538 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.57□□□□□ -2.5
HLA-DQB2P05538 MIR4645-201ENST00000583158 77 ntBASIC-0.57□□□□□ -2.5
HLA-DQB2P05538 MIR3666-201ENST00000607845 111 ntBASIC-0.57□□□□□ -2.5
HLA-DQB2P05538 AL021707.8-201ENST00000609428 183 ntBASIC-0.57□□□□□ -2.5
HLA-DQB2P05538 AC063944.3-201ENST00000609969 533 ntBASIC-0.57□□□□□ -2.5
HLA-DQB2P05538 AC010205.1-201ENST00000616668 449 ntBASIC-0.57□□□□□ -2.5
HLA-DQB2P05538 SNORD114-31-201ENST00000363219 75 ntBASIC-0.58□□□□□ -2.5
HLA-DQB2P05538 RNY4P14-201ENST00000363656 96 ntBASIC-0.58□□□□□ -2.5
HLA-DQB2P05538 SNORA32.3-201ENST00000384772 121 ntBASIC-0.58□□□□□ -2.5
HLA-DQB2P05538 SNORA26.6-201ENST00000391256 115 ntBASIC-0.58□□□□□ -2.5
HLA-DQB2P05538 AC107399.1-201ENST00000451226 265 ntBASIC-0.58□□□□□ -2.5
HLA-DQB2P05538 RNU7-96P-201ENST00000459535 64 ntBASIC-0.58□□□□□ -2.5
HLA-DQB2P05538 RNU6-998P-201ENST00000515894 101 ntBASIC-0.58□□□□□ -2.5
HLA-DQB2P05538 RNU6-506P-201ENST00000516553 94 ntBASIC-0.58□□□□□ -2.5
HLA-DQB2P05538 RNU2-31P-201ENST00000516954 155 ntBASIC-0.58□□□□□ -2.5
HLA-DQB2P05538 MIR5706-201ENST00000579841 80 ntBASIC-0.58□□□□□ -2.5
HLA-DQB2P05538 MIR3925-201ENST00000584674 77 ntBASIC-0.58□□□□□ -2.5
HLA-DQB2P05538 U6.92-201ENST00000636464 89 ntBASIC-0.58□□□□□ -2.5
HLA-DQB2P05538 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.58□□□□□ -2.5
HLA-DQB2P05538 AL596211.1-201ENST00000569873 2277 ntBASIC-0.58□□□□□ -2.5
HLA-DQB2P05538 MIR342-201ENST00000362212 99 ntBASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 MIR548A2-201ENST00000384956 97 ntBASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 RNA5SP300-201ENST00000391197 107 ntBASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 RNU7-45P-201ENST00000459460 63 ntBASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 RNU6-475P-201ENST00000516073 104 ntBASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 RNU6-693P-201ENST00000516134 107 ntBASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 RNA5SP285-201ENST00000516619 119 ntBASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 RNU7-4P-201ENST00000516961 62 ntBASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 AC144568.1-201ENST00000520139 137 ntBASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 AL049861.1-201ENST00000603130 150 ntBASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 MIR6717-201ENST00000622747 73 ntBASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 AL162376.1-201ENST00000624117 175 ntBASIC-0.59□□□□□ -2.5
HLA-DQB2P05538 RNU6-801P-201ENST00000364087 105 ntBASIC-0.6□□□□□ -2.51
HLA-DQB2P05538 RNU6-726P-201ENST00000364680 107 ntBASIC-0.6□□□□□ -2.51
HLA-DQB2P05538 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.6□□□□□ -2.51
HLA-DQB2P05538 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.6□□□□□ -2.51
HLA-DQB2P05538 MIR548L-201ENST00000408303 86 ntBASIC-0.6□□□□□ -2.51
HLA-DQB2P05538 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.6□□□□□ -2.51
HLA-DQB2P05538 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.6□□□□□ -2.51
HLA-DQB2P05538 SNORA25.16-201ENST00000516741 121 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms