Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU6-823P-201ENST00000391042 103 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 RNA5SP193-201ENST00000410353 107 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 PMCHL1-202ENST00000423102 261 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 RNU7-67P-201ENST00000459003 62 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 RN7SKP12-201ENST00000516275 143 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 RNU6-958P-201ENST00000516995 106 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.32□□□□□ -2.36
HLA-DPB1P04440 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.32□□□□□ -2.36
HLA-DPB1P04440 MIR4711-201ENST00000578274 70 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 MIR3612-201ENST00000579753 87 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 MIR4801-201ENST00000582704 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 SNORD115-40-201ENST00000606510 82 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 AC090574.1-201ENST00000623186 233 ntBASIC0.32□□□□□ -2.36
HLA-DPB1P04440 RNU4-10P-201ENST00000364383 140 ntBASIC0.31□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.269-201ENST00000364685 89 ntBASIC0.31□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.355-201ENST00000365462 98 ntBASIC0.31□□□□□ -2.36
HLA-DPB1P04440 MIR518F-201ENST00000384973 87 ntBASIC0.31□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.581-201ENST00000391017 97 ntBASIC0.31□□□□□ -2.36
HLA-DPB1P04440 HMGN1P33-201ENST00000432945 451 ntBASIC0.31□□□□□ -2.36
HLA-DPB1P04440 RNU7-56P-201ENST00000458744 62 ntBASIC0.31□□□□□ -2.36
HLA-DPB1P04440 SNORD77.4-201ENST00000516158 81 ntBASIC0.31□□□□□ -2.36
HLA-DPB1P04440 SNORA18.4-201ENST00000516440 124 ntBASIC0.31□□□□□ -2.36
HLA-DPB1P04440 MIR5692C2-201ENST00000577959 77 ntBASIC0.31□□□□□ -2.36
HLA-DPB1P04440 AP000942.4-201ENST00000604811 241 ntBASIC0.31□□□□□ -2.36
HLA-DPB1P04440 AC243829.6-201ENST00000612652 106 ntBASIC0.31□□□□□ -2.36
HLA-DPB1P04440 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
HLA-DPB1P04440 AC010332.2-201ENST00000613083 1904 ntBASIC0.3□□□□□ -2.36
HLA-DPB1P04440 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.3□□□□□ -2.36
HLA-DPB1P04440 MIR367-201ENST00000362299 68 ntBASIC0.3□□□□□ -2.36
HLA-DPB1P04440 snoU2_19.2-201ENST00000363024 80 ntBASIC0.3□□□□□ -2.36
HLA-DPB1P04440 SNORD115-28-201ENST00000363931 81 ntBASIC0.3□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.394-201ENST00000383942 103 ntBASIC0.3□□□□□ -2.36
HLA-DPB1P04440 RNU6-662P-201ENST00000384253 104 ntBASIC0.3□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.541-201ENST00000384640 113 ntBASIC0.3□□□□□ -2.36
HLA-DPB1P04440 MIR215-201ENST00000384858 110 ntBASIC0.3□□□□□ -2.36
HLA-DPB1P04440 AC023449.1-201ENST00000454464 154 ntBASIC0.3□□□□□ -2.36
HLA-DPB1P04440 AC107297.1-201ENST00000459991 176 ntBASIC0.3□□□□□ -2.36
HLA-DPB1P04440 Z83818.1-201ENST00000603584 150 ntBASIC0.3□□□□□ -2.36
HLA-DPB1P04440 AL162730.1-201ENST00000605734 292 ntBASIC0.3□□□□□ -2.36
HLA-DPB1P04440 MIR8055-201ENST00000610739 97 ntBASIC0.3□□□□□ -2.36
HLA-DPB1P04440 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
HLA-DPB1P04440 MIRLET7D-201ENST00000362263 87 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.14-201ENST00000362415 103 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.293-201ENST00000364908 93 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 RNU6-290P-201ENST00000365212 101 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 SNORA63.7-201ENST00000365579 123 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.587-201ENST00000391210 103 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 RNA5SP496-201ENST00000391240 109 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 MIR1252-201ENST00000408861 65 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 RNU6-1190P-201ENST00000410811 104 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.29□□□□□ -2.36
HLA-DPB1P04440 MTCO2P24-201ENST00000515611 426 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 SNORD36C-201ENST00000516733 66 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 MIR4724-201ENST00000579485 89 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 AC008608.1-201ENST00000603910 127 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 AL355297.3-201ENST00000604082 446 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 AL008718.3-201ENST00000610217 321 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.29□□□□□ -2.36
HLA-DPB1P04440 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 AC090971.5-201ENST00000621102 293 ntBASIC0.29□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.26-201ENST00000362539 101 ntBASIC0.28□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.37-201ENST00000362606 108 ntBASIC0.28□□□□□ -2.36
HLA-DPB1P04440 RNU6-806P-201ENST00000365147 105 ntBASIC0.28□□□□□ -2.36
HLA-DPB1P04440 SNORD61-201ENST00000384252 73 ntBASIC0.28□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.572-201ENST00000384757 98 ntBASIC0.28□□□□□ -2.36
HLA-DPB1P04440 RPL21P38-201ENST00000418090 167 ntBASIC0.28□□□□□ -2.36
HLA-DPB1P04440 RNU7-73P-201ENST00000458743 63 ntBASIC0.28□□□□□ -2.36
HLA-DPB1P04440 RNU6-693P-201ENST00000516134 107 ntBASIC0.28□□□□□ -2.36
HLA-DPB1P04440 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.28□□□□□ -2.36
HLA-DPB1P04440 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.28□□□□□ -2.36
HLA-DPB1P04440 Z97988.1-201ENST00000637697 135 ntBASIC0.28□□□□□ -2.36
HLA-DPB1P04440 Y_RNA.217-201ENST00000364214 105 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.389-201ENST00000383924 113 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 RNU6-474P-201ENST00000384243 107 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 SNORA27-201ENST00000384323 126 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.508-201ENST00000384502 114 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 SNORD38B-201ENST00000384690 67 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 MIR588-201ENST00000384900 83 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 SNORA40.5-201ENST00000391061 128 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 ELOCP20-201ENST00000422460 345 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 AC087499.4-201ENST00000448505 178 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.641-201ENST00000459414 105 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 snoU13.18-201ENST00000459483 104 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 RNU2-31P-201ENST00000516954 155 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 RNU6-1270P-201ENST00000517128 108 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 SNORD38B-202ENST00000625943 69 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 MTND4P29-201ENST00000503122 1372 ntBASIC0.27□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.214-201ENST00000364201 112 ntBASIC0.26□□□□□ -2.37
HLA-DPB1P04440 RNY1-201ENST00000364228 113 ntBASIC0.26□□□□□ -2.37
HLA-DPB1P04440 Y_RNA.380-201ENST00000365663 111 ntBASIC0.26□□□□□ -2.37
HLA-DPB1P04440 MT-TD-201ENST00000387419 68 ntBASIC0.26□□□□□ -2.37
HLA-DPB1P04440 RNU6-679P-201ENST00000391003 106 ntBASIC0.26□□□□□ -2.37
HLA-DPB1P04440 MIR938-201ENST00000401216 83 ntBASIC0.26□□□□□ -2.37
HLA-DPB1P04440 RNU6-602P-201ENST00000411155 105 ntBASIC0.26□□□□□ -2.37
HLA-DPB1P04440 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.26□□□□□ -2.37
HLA-DPB1P04440 AL138752.1-201ENST00000452964 351 ntBASIC0.26□□□□□ -2.37
HLA-DPB1P04440 RPS29P24-201ENST00000486345 171 ntBASIC0.26□□□□□ -2.37
HLA-DPB1P04440 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms