Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.14□□□□□ -2.59
TFF1P04155 SNORA72.3-201ENST00000365074 132 ntBASIC-1.14□□□□□ -2.59
TFF1P04155 RNU4-20P-201ENST00000365601 151 ntBASIC-1.14□□□□□ -2.59
TFF1P04155 MIR122-201ENST00000385044 85 ntBASIC-1.14□□□□□ -2.59
TFF1P04155 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.14□□□□□ -2.59
TFF1P04155 RPL39P25-201ENST00000449384 154 ntBASIC-1.14□□□□□ -2.59
TFF1P04155 AC010655.3-201ENST00000478818 450 ntBASIC-1.14□□□□□ -2.59
TFF1P04155 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.14□□□□□ -2.59
TFF1P04155 RNU6-881P-201ENST00000516813 102 ntBASIC-1.14□□□□□ -2.59
TFF1P04155 MTCO2P4-201ENST00000517968 247 ntBASIC-1.14□□□□□ -2.59
TFF1P04155 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.14□□□□□ -2.59
TFF1P04155 AC004467.1-201ENST00000615678 330 ntBASIC-1.14□□□□□ -2.59
TFF1P04155 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 SNORD115-2-201ENST00000362842 82 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 RNU6-767P-201ENST00000384132 107 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 SNORA27-201ENST00000384323 126 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 SNORD77.3-201ENST00000391113 65 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 SNORA26.6-201ENST00000391256 115 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 MIR190B-201ENST00000401119 79 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 MIR548I3-201ENST00000408378 149 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 MIR548O-201ENST00000408583 114 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 RNU6-710P-201ENST00000410424 105 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 RNU6-938P-201ENST00000411285 103 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 USP9YP30-201ENST00000430729 455 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.15□□□□□ -2.59
TFF1P04155 RNU6-436P-201ENST00000516171 114 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 MIR4499-201ENST00000584834 69 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 AC087752.4-201ENST00000605911 462 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 uc_338.19-201ENST00000616808 99 ntBASIC-1.15□□□□□ -2.59
TFF1P04155 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.15□□□□□ -2.59
TFF1P04155 FGF7P2-201ENST00000332473 296 ntBASIC-1.16□□□□□ -2.6
TFF1P04155 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.16□□□□□ -2.6
TFF1P04155 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.16□□□□□ -2.6
TFF1P04155 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.16□□□□□ -2.6
TFF1P04155 AL603914.1-201ENST00000401964 204 ntBASIC-1.16□□□□□ -2.6
TFF1P04155 RNU7-96P-201ENST00000459535 64 ntBASIC-1.16□□□□□ -2.6
TFF1P04155 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.16□□□□□ -2.6
TFF1P04155 AC141846.1-201ENST00000568348 142 ntBASIC-1.16□□□□□ -2.6
TFF1P04155 MIR4306-201ENST00000583390 91 ntBASIC-1.16□□□□□ -2.6
TFF1P04155 AC018638.8-201ENST00000588755 281 ntBASIC-1.16□□□□□ -2.6
TFF1P04155 AL133255.1-201ENST00000606374 441 ntBASIC-1.16□□□□□ -2.6
TFF1P04155 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.17□□□□□ -2.6
TFF1P04155 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.17□□□□□ -2.6
TFF1P04155 RNY4P6-201ENST00000363667 96 ntBASIC-1.17□□□□□ -2.6
TFF1P04155 RNU4-50P-201ENST00000364361 141 ntBASIC-1.17□□□□□ -2.6
TFF1P04155 RNU4-66P-201ENST00000365199 138 ntBASIC-1.17□□□□□ -2.6
TFF1P04155 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.17□□□□□ -2.6
TFF1P04155 MTCO2P19-201ENST00000427513 598 ntBASIC-1.17□□□□□ -2.6
TFF1P04155 RNU7-115P-201ENST00000516433 55 ntBASIC-1.17□□□□□ -2.6
TFF1P04155 RNA5SP169-201ENST00000517268 117 ntBASIC-1.17□□□□□ -2.6
TFF1P04155 AC019193.3-201ENST00000609144 554 ntBASIC-1.17□□□□□ -2.6
TFF1P04155 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.18□□□□□ -2.6
TFF1P04155 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.18□□□□□ -2.6
TFF1P04155 SNORD115-28-201ENST00000363931 81 ntBASIC-1.18□□□□□ -2.6
TFF1P04155 RNU6-702P-201ENST00000364982 107 ntBASIC-1.18□□□□□ -2.6
TFF1P04155 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.18□□□□□ -2.6
TFF1P04155 MIR9-2-201ENST00000384838 87 ntBASIC-1.18□□□□□ -2.6
TFF1P04155 RNA5SP237-201ENST00000410414 113 ntBASIC-1.18□□□□□ -2.6
TFF1P04155 RNA5SP261-201ENST00000410536 106 ntBASIC-1.18□□□□□ -2.6
TFF1P04155 RNU4-55P-201ENST00000410731 137 ntBASIC-1.18□□□□□ -2.6
TFF1P04155 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.18□□□□□ -2.6
TFF1P04155 AL593851.1-201ENST00000426171 157 ntBASIC-1.18□□□□□ -2.6
TFF1P04155 RNU6-998P-201ENST00000515894 101 ntBASIC-1.18□□□□□ -2.6
TFF1P04155 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.18□□□□□ -2.6
TFF1P04155 MIR4423-201ENST00000580922 80 ntBASIC-1.18□□□□□ -2.6
TFF1P04155 MIR6717-201ENST00000622747 73 ntBASIC-1.18□□□□□ -2.6
TFF1P04155 RNU6-865P-201ENST00000364772 107 ntBASIC-1.19□□□□□ -2.6
TFF1P04155 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.19□□□□□ -2.6
TFF1P04155 AC055872.1-201ENST00000570978 278 ntBASIC-1.19□□□□□ -2.6
TFF1P04155 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.2□□□□□ -2.6
TFF1P04155 SNORA63.5-201ENST00000363548 123 ntBASIC-1.2□□□□□ -2.6
TFF1P04155 RNU6-879P-201ENST00000364328 108 ntBASIC-1.2□□□□□ -2.6
TFF1P04155 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.2□□□□□ -2.6
TFF1P04155 RNU5A-2P-201ENST00000384337 116 ntBASIC-1.2□□□□□ -2.6
TFF1P04155 SNORA72.6-201ENST00000384520 129 ntBASIC-1.2□□□□□ -2.6
TFF1P04155 RNU6-455P-201ENST00000384681 107 ntBASIC-1.2□□□□□ -2.6
TFF1P04155 MT-TY-201ENST00000387409 66 ntBASIC-1.2□□□□□ -2.6
TFF1P04155 AC074085.1-201ENST00000413598 418 ntBASIC-1.2□□□□□ -2.6
TFF1P04155 RNU6-261P-201ENST00000459506 102 ntBASIC-1.2□□□□□ -2.6
TFF1P04155 RNA5SP401-201ENST00000515920 127 ntBASIC-1.2□□□□□ -2.6
TFF1P04155 SNORA25.16-201ENST00000516741 121 ntBASIC-1.2□□□□□ -2.6
TFF1P04155 MIR2355-201ENST00000517199 87 ntBASIC-1.2□□□□□ -2.6
TFF1P04155 RNU6-706P-201ENST00000517229 104 ntBASIC-1.2□□□□□ -2.6
TFF1P04155 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.21□□□□□ -2.6
TFF1P04155 RNU4-28P-201ENST00000364739 141 ntBASIC-1.21□□□□□ -2.6
TFF1P04155 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.21□□□□□ -2.6
TFF1P04155 RNU6-900P-201ENST00000384498 102 ntBASIC-1.21□□□□□ -2.6
TFF1P04155 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.21□□□□□ -2.6
TFF1P04155 AL500527.2-201ENST00000454105 95 ntBASIC-1.21□□□□□ -2.6
TFF1P04155 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.21□□□□□ -2.6
TFF1P04155 RNU2-31P-201ENST00000516954 155 ntBASIC-1.21□□□□□ -2.6
TFF1P04155 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.21□□□□□ -2.6
TFF1P04155 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.21□□□□□ -2.6
TFF1P04155 MIR6851-201ENST00000617060 67 ntBASIC-1.21□□□□□ -2.6
TFF1P04155 AC105081.1-201ENST00000617727 106 ntBASIC-1.21□□□□□ -2.6
TFF1P04155 AC022140.2-201ENST00000623500 188 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms