Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL137161.1-201ENST00000532231 390 ntBASIC-1.4□□□□□ -2.63
APOBP04114 AC100814.1-201ENST00000606963 623 ntBASIC-1.4□□□□□ -2.63
APOBP04114 AL121757.2-201ENST00000611223 313 ntBASIC-1.4□□□□□ -2.63
APOBP04114 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.4□□□□□ -2.63
APOBP04114 RNU6-476P-201ENST00000384726 107 ntBASIC-1.4□□□□□ -2.63
APOBP04114 RNU6-592P-201ENST00000411333 103 ntBASIC-1.4□□□□□ -2.63
APOBP04114 RPL22P17-201ENST00000438729 315 ntBASIC-1.4□□□□□ -2.63
APOBP04114 MTND1P5-201ENST00000517906 940 ntBASIC-1.4□□□□□ -2.63
APOBP04114 MTND2P32-201ENST00000521584 1038 ntBASIC-1.4□□□□□ -2.63
APOBP04114 SNORD115-29-201ENST00000362834 82 ntBASIC-1.4□□□□□ -2.63
APOBP04114 SNORD115-21-201ENST00000362963 81 ntBASIC-1.4□□□□□ -2.63
APOBP04114 SNORD115-14-201ENST00000363090 81 ntBASIC-1.4□□□□□ -2.63
APOBP04114 SNORD115-11-201ENST00000363616 82 ntBASIC-1.4□□□□□ -2.63
APOBP04114 SNORD115-5-201ENST00000363633 82 ntBASIC-1.4□□□□□ -2.63
APOBP04114 SNORD115-39-201ENST00000363694 82 ntBASIC-1.4□□□□□ -2.63
APOBP04114 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.4□□□□□ -2.63
APOBP04114 SNORD115-4-201ENST00000363810 82 ntBASIC-1.4□□□□□ -2.63
APOBP04114 SNORD115-6-201ENST00000363942 82 ntBASIC-1.4□□□□□ -2.63
APOBP04114 SNORD115-1-201ENST00000364961 82 ntBASIC-1.4□□□□□ -2.63
APOBP04114 SNORD115-10-201ENST00000365073 81 ntBASIC-1.4□□□□□ -2.63
APOBP04114 SNORD115-43-201ENST00000365503 82 ntBASIC-1.4□□□□□ -2.63
APOBP04114 SNORD115-36-201ENST00000365629 82 ntBASIC-1.4□□□□□ -2.63
APOBP04114 RNU6-449P-201ENST00000383914 107 ntBASIC-1.4□□□□□ -2.63
APOBP04114 MIR599-201ENST00000385069 95 ntBASIC-1.4□□□□□ -2.63
APOBP04114 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.4□□□□□ -2.63
APOBP04114 AC097635.1-201ENST00000450678 155 ntBASIC-1.4□□□□□ -2.63
APOBP04114 SNORD65B-201ENST00000459126 73 ntBASIC-1.4□□□□□ -2.63
APOBP04114 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.4□□□□□ -2.63
APOBP04114 AL008718.3-201ENST00000610217 321 ntBASIC-1.4□□□□□ -2.63
APOBP04114 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.4□□□□□ -2.63
APOBP04114 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.4□□□□□ -2.63
APOBP04114 SNORD50B-201ENST00000364995 70 ntBASIC-1.4□□□□□ -2.63
APOBP04114 AL035461.1-201ENST00000421490 332 ntBASIC-1.4□□□□□ -2.63
APOBP04114 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.4□□□□□ -2.63
APOBP04114 AC145423.2-201ENST00000610631 239 ntBASIC-1.4□□□□□ -2.63
APOBP04114 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.41□□□□□ -2.63
APOBP04114 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.41□□□□□ -2.63
APOBP04114 RNU4-20P-201ENST00000365601 151 ntBASIC-1.41□□□□□ -2.63
APOBP04114 SNORA25.14-201ENST00000516481 132 ntBASIC-1.41□□□□□ -2.63
APOBP04114 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.41□□□□□ -2.63
APOBP04114 AC127459.3-201ENST00000624328 466 ntBASIC-1.41□□□□□ -2.63
APOBP04114 AL589826.1-201ENST00000340697 249 ntBASIC-1.41□□□□□ -2.64
APOBP04114 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.41□□□□□ -2.64
APOBP04114 RNU6-429P-201ENST00000384582 108 ntBASIC-1.41□□□□□ -2.64
APOBP04114 AC108059.2-201ENST00000434626 151 ntBASIC-1.41□□□□□ -2.64
APOBP04114 RNU6-958P-201ENST00000516995 106 ntBASIC-1.41□□□□□ -2.64
APOBP04114 RNU6-653P-201ENST00000363074 106 ntBASIC-1.41□□□□□ -2.64
APOBP04114 MTCO1P57-201ENST00000432182 261 ntBASIC-1.41□□□□□ -2.64
APOBP04114 AC093423.1-201ENST00000440817 142 ntBASIC-1.41□□□□□ -2.64
APOBP04114 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.41□□□□□ -2.64
APOBP04114 RNA5SP133-201ENST00000363368 119 ntBASIC-1.42□□□□□ -2.64
APOBP04114 MIR539-201ENST00000365690 78 ntBASIC-1.42□□□□□ -2.64
APOBP04114 AC093783.1-201ENST00000612976 329 ntBASIC-1.42□□□□□ -2.64
APOBP04114 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
APOBP04114 SNORA72-201ENST00000384339 132 ntBASIC-1.42□□□□□ -2.64
APOBP04114 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.42□□□□□ -2.64
APOBP04114 ELOCP4-201ENST00000420090 333 ntBASIC-1.42□□□□□ -2.64
APOBP04114 AC005972.2-201ENST00000604690 348 ntBASIC-1.42□□□□□ -2.64
APOBP04114 AC073539.2-201ENST00000597113 165 ntBASIC-1.42□□□□□ -2.64
APOBP04114 RNU6-208P-201ENST00000362431 107 ntBASIC-1.43□□□□□ -2.64
APOBP04114 SNORA27.1-201ENST00000362604 124 ntBASIC-1.43□□□□□ -2.64
APOBP04114 RNU6-280P-201ENST00000364145 104 ntBASIC-1.43□□□□□ -2.64
APOBP04114 RNU6-117P-201ENST00000365415 107 ntBASIC-1.43□□□□□ -2.64
APOBP04114 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.43□□□□□ -2.64
APOBP04114 SNORA26.4-201ENST00000391188 123 ntBASIC-1.43□□□□□ -2.64
APOBP04114 AC087752.4-201ENST00000605911 462 ntBASIC-1.43□□□□□ -2.64
APOBP04114 MIR548AY-201ENST00000617669 107 ntBASIC-1.43□□□□□ -2.64
APOBP04114 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.43□□□□□ -2.64
APOBP04114 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.43□□□□□ -2.64
APOBP04114 RNU6-695P-201ENST00000391157 104 ntBASIC-1.43□□□□□ -2.64
APOBP04114 MTND3P25-201ENST00000509243 135 ntBASIC-1.43□□□□□ -2.64
APOBP04114 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.43□□□□□ -2.64
APOBP04114 AC096949.1-201ENST00000412047 152 ntBASIC-1.43□□□□□ -2.64
APOBP04114 MTCO2P3-201ENST00000442543 421 ntBASIC-1.43□□□□□ -2.64
APOBP04114 YWHAEP2-201ENST00000580066 112 ntBASIC-1.43□□□□□ -2.64
APOBP04114 AC072046.2-201ENST00000618366 268 ntBASIC-1.43□□□□□ -2.64
APOBP04114 RNU6-607P-201ENST00000411283 108 ntBASIC-1.44□□□□□ -2.64
APOBP04114 SNORA63.5-201ENST00000363548 123 ntBASIC-1.44□□□□□ -2.64
APOBP04114 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.44□□□□□ -2.64
APOBP04114 MIR2681-201ENST00000581814 105 ntBASIC-1.44□□□□□ -2.64
APOBP04114 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.44□□□□□ -2.64
APOBP04114 RNU6-777P-201ENST00000364265 104 ntBASIC-1.44□□□□□ -2.64
APOBP04114 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.44□□□□□ -2.64
APOBP04114 RNU6-893P-201ENST00000458841 100 ntBASIC-1.44□□□□□ -2.64
APOBP04114 RNU6-289P-201ENST00000364093 107 ntBASIC-1.44□□□□□ -2.64
APOBP04114 RNU6-354P-201ENST00000383862 107 ntBASIC-1.44□□□□□ -2.64
APOBP04114 RNU6-610P-201ENST00000384264 107 ntBASIC-1.44□□□□□ -2.64
APOBP04114 RNU6-456P-201ENST00000384493 107 ntBASIC-1.44□□□□□ -2.64
APOBP04114 RNU6-136P-201ENST00000384663 107 ntBASIC-1.44□□□□□ -2.64
APOBP04114 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.44□□□□□ -2.64
APOBP04114 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.44□□□□□ -2.64
APOBP04114 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.44□□□□□ -2.64
APOBP04114 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.45□□□□□ -2.64
APOBP04114 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.45□□□□□ -2.64
APOBP04114 SNORD65.1-201ENST00000390889 71 ntBASIC-1.45□□□□□ -2.64
APOBP04114 SNORD65C-201ENST00000390962 71 ntBASIC-1.45□□□□□ -2.64
APOBP04114 PMCHL1-202ENST00000423102 261 ntBASIC-1.45□□□□□ -2.64
APOBP04114 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.45□□□□□ -2.64
APOBP04114 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.45□□□□□ -2.64
APOBP04114 RNU6-407P-201ENST00000365280 104 ntBASIC-1.45□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms