Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 RNU6-1031P-201ENST00000384773 107 ntBASIC1.09□□□□□ -2.23
KRT6AP02538 AC108667.1-201ENST00000428618 249 ntBASIC1.09□□□□□ -2.23
KRT6AP02538 AC097639.2-201ENST00000603159 172 ntBASIC1.09□□□□□ -2.23
KRT6AP02538 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRT6AP02538 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRT6AP02538 SNORD14E-201ENST00000364009 85 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 Y_RNA.634-201ENST00000364811 113 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 SNORD50B-201ENST00000364995 70 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 RNY1P5-201ENST00000383890 115 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 SNORD116-18-201ENST00000383961 92 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 RNU6-442P-201ENST00000383968 104 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 Y_RNA.486-201ENST00000384398 107 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 MIR194-1-201ENST00000384892 85 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 MIR802-201ENST00000390235 94 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 SNORD72-201ENST00000390994 80 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 HMGN2P32-201ENST00000444648 269 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 CYCTP-201ENST00000504253 315 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 RNU7-200P-201ENST00000516105 62 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 SNORD45.4-201ENST00000516629 73 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 Y_RNA.703-201ENST00000516846 111 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 RNU6-365P-201ENST00000517113 106 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 MTND5P41-201ENST00000517498 206 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 MIR378D2-201ENST00000580636 98 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 DNAJC19P2-201ENST00000593340 302 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 AC120024.3-201ENST00000603167 156 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 AC021506.2-201ENST00000612354 169 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 AC106754.2-201ENST00000623006 233 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 AC027279.3-201ENST00000625055 122 ntBASIC1.08□□□□□ -2.24
KRT6AP02538 MIRLET7C-201ENST00000362160 84 ntBASIC1.07□□□□□ -2.24
KRT6AP02538 Y_RNA.91-201ENST00000363042 107 ntBASIC1.07□□□□□ -2.24
KRT6AP02538 Y_RNA.336-201ENST00000365307 109 ntBASIC1.07□□□□□ -2.24
KRT6AP02538 RNU6-1130P-201ENST00000365434 107 ntBASIC1.07□□□□□ -2.24
KRT6AP02538 RNU6-424P-201ENST00000384367 105 ntBASIC1.07□□□□□ -2.24
KRT6AP02538 Y_RNA.506-201ENST00000384494 102 ntBASIC1.07□□□□□ -2.24
KRT6AP02538 Y_RNA.521-201ENST00000384560 114 ntBASIC1.07□□□□□ -2.24
KRT6AP02538 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
KRT6AP02538 RNU6-237P-201ENST00000515985 71 ntBASIC1.07□□□□□ -2.24
KRT6AP02538 SNORD116-25-201ENST00000516517 92 ntBASIC1.07□□□□□ -2.24
KRT6AP02538 RNU6-504P-201ENST00000516568 104 ntBASIC1.07□□□□□ -2.24
KRT6AP02538 MIR4778-201ENST00000577635 80 ntBASIC1.07□□□□□ -2.24
KRT6AP02538 MIR3646-201ENST00000578301 84 ntBASIC1.07□□□□□ -2.24
KRT6AP02538 Y_RNA.778-201ENST00000620203 90 ntBASIC1.07□□□□□ -2.24
KRT6AP02538 RNU6-597P-201ENST00000365620 102 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 SNORD24-201ENST00000383884 75 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 Y_RNA.393-201ENST00000383936 102 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 Y_RNA.400-201ENST00000383963 111 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 RNU6-163P-201ENST00000384396 106 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 RNU6-125P-201ENST00000384505 107 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 MIR222-201ENST00000384992 110 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
KRT6AP02538 RNU6-482P-201ENST00000391068 107 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 U8.16-201ENST00000391279 133 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 CALM2P4-201ENST00000430810 426 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 AC093850.1-201ENST00000454121 251 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 AC114811.1-201ENST00000507207 168 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 RNA5SP168-201ENST00000516642 112 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 RNU6-1116P-201ENST00000517269 99 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.06□□□□□ -2.24
KRT6AP02538 MIR3133-201ENST00000583157 78 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 AC006441.5-201ENST00000612680 209 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 AL513423.1-201ENST00000621695 132 ntBASIC1.06□□□□□ -2.24
KRT6AP02538 MIR378A-201ENST00000362177 66 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 RNU6-1123P-201ENST00000362347 106 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 Y_RNA.66-201ENST00000362862 102 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 RNU6-774P-201ENST00000363238 107 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 RNU6-833P-201ENST00000363486 107 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 RNU6-151P-201ENST00000364158 107 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 RNU6-978P-201ENST00000364371 103 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 SNORA25.7-201ENST00000364375 127 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 SNORA70.7-201ENST00000384159 133 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 RNU6-768P-201ENST00000384683 107 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 MIR891A-201ENST00000401237 79 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 AP1B1P2-201ENST00000416196 106 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 SNRPGP14-201ENST00000435400 219 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 AL392103.1-201ENST00000447000 198 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 RNU7-12P-201ENST00000516030 62 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 MIR6078-201ENST00000611069 100 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 MIR6844-201ENST00000637122 62 ntBASIC1.05□□□□□ -2.24
KRT6AP02538 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.04□□□□□ -2.24
KRT6AP02538 RNU6-199P-201ENST00000362954 107 ntBASIC1.04□□□□□ -2.24
KRT6AP02538 RNU6-888P-201ENST00000363010 101 ntBASIC1.04□□□□□ -2.24
KRT6AP02538 RNU6-268P-201ENST00000364174 107 ntBASIC1.04□□□□□ -2.24
KRT6AP02538 RNU4-11P-201ENST00000365287 132 ntBASIC1.04□□□□□ -2.24
KRT6AP02538 SNORD61-201ENST00000384252 73 ntBASIC1.04□□□□□ -2.24
KRT6AP02538 MIR660-201ENST00000385235 97 ntBASIC1.04□□□□□ -2.24
KRT6AP02538 SNORD37.2-201ENST00000391075 66 ntBASIC1.04□□□□□ -2.24
KRT6AP02538 SNORA75.5-201ENST00000391291 81 ntBASIC1.04□□□□□ -2.24
KRT6AP02538 BTF3P4-201ENST00000418852 495 ntBASIC1.04□□□□□ -2.24
KRT6AP02538 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.04□□□□□ -2.24
KRT6AP02538 Y_RNA.666-201ENST00000516187 112 ntBASIC1.04□□□□□ -2.24
KRT6AP02538 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
KRT6AP02538 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.04□□□□□ -2.24
KRT6AP02538 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
KRT6AP02538 HSPE1P19-201ENST00000603327 295 ntBASIC1.04□□□□□ -2.24
KRT6AP02538 SNORD3E-202ENST00000627253 216 ntBASIC1.04□□□□□ -2.24
KRT6AP02538 MIR3658-201ENST00000636291 56 ntBASIC1.04□□□□□ -2.24
KRT6AP02538 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KRT6AP02538 Y_RNA.215-201ENST00000364204 112 ntBASIC1.03□□□□□ -2.24
KRT6AP02538 Y_RNA.343-201ENST00000365354 112 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms