Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU6-392P-201ENST00000364926 101 ntBASIC1.6□□□□□ -2.15
LDLRP01130 RNU6-44P-201ENST00000384045 107 ntBASIC1.6□□□□□ -2.15
LDLRP01130 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
LDLRP01130 RNU6-440P-201ENST00000390882 105 ntBASIC1.6□□□□□ -2.15
LDLRP01130 RNU6-360P-201ENST00000390944 104 ntBASIC1.6□□□□□ -2.15
LDLRP01130 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.6□□□□□ -2.15
LDLRP01130 SNORA31.10-201ENST00000516482 106 ntBASIC1.6□□□□□ -2.15
LDLRP01130 RNU7-149P-201ENST00000516739 59 ntBASIC1.6□□□□□ -2.15
LDLRP01130 SNORA44.1-201ENST00000517031 108 ntBASIC1.6□□□□□ -2.15
LDLRP01130 MIR4709-201ENST00000577272 72 ntBASIC1.6□□□□□ -2.15
LDLRP01130 AL359881.1-201ENST00000602916 267 ntBASIC1.6□□□□□ -2.15
LDLRP01130 MIR502-201ENST00000606349 86 ntBASIC1.6□□□□□ -2.15
LDLRP01130 U7.2-201ENST00000607576 63 ntBASIC1.6□□□□□ -2.15
LDLRP01130 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.6□□□□□ -2.15
LDLRP01130 MIR8054-201ENST00000620877 86 ntBASIC1.6□□□□□ -2.15
LDLRP01130 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.59□□□□□ -2.15
LDLRP01130 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.59□□□□□ -2.15
LDLRP01130 RNU6-235P-201ENST00000362644 107 ntBASIC1.59□□□□□ -2.15
LDLRP01130 Y_RNA.327-201ENST00000365201 102 ntBASIC1.59□□□□□ -2.15
LDLRP01130 RNU6-1138P-201ENST00000365359 106 ntBASIC1.59□□□□□ -2.15
LDLRP01130 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
LDLRP01130 Y_RNA.584-201ENST00000391090 114 ntBASIC1.59□□□□□ -2.15
LDLRP01130 RNU11-5P-201ENST00000391216 129 ntBASIC1.59□□□□□ -2.15
LDLRP01130 SNORA79-201ENST00000408376 140 ntBASIC1.59□□□□□ -2.15
LDLRP01130 AC004965.1-201ENST00000413033 213 ntBASIC1.59□□□□□ -2.15
LDLRP01130 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.59□□□□□ -2.15
LDLRP01130 AC007751.1-201ENST00000529260 376 ntBASIC1.59□□□□□ -2.15
LDLRP01130 MIR3121-201ENST00000579680 77 ntBASIC1.59□□□□□ -2.15
LDLRP01130 MIR2681-201ENST00000581814 105 ntBASIC1.59□□□□□ -2.15
LDLRP01130 Pinc.1-201ENST00000616452 154 ntBASIC1.59□□□□□ -2.15
LDLRP01130 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.59□□□□□ -2.16
LDLRP01130 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
LDLRP01130 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.58□□□□□ -2.16
LDLRP01130 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LDLRP01130 Y_RNA.253-201ENST00000364562 112 ntBASIC1.58□□□□□ -2.16
LDLRP01130 RNU6-1325P-201ENST00000364905 105 ntBASIC1.58□□□□□ -2.16
LDLRP01130 RNU6-429P-201ENST00000384582 108 ntBASIC1.58□□□□□ -2.16
LDLRP01130 Y_RNA.540-201ENST00000384638 111 ntBASIC1.58□□□□□ -2.16
LDLRP01130 RNU2-70P-201ENST00000410718 179 ntBASIC1.58□□□□□ -2.16
LDLRP01130 Y_RNA.621-201ENST00000411065 96 ntBASIC1.58□□□□□ -2.16
LDLRP01130 OR9P1P-201ENST00000496431 281 ntBASIC1.58□□□□□ -2.16
LDLRP01130 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
LDLRP01130 Y_RNA.712-201ENST00000517011 92 ntBASIC1.58□□□□□ -2.16
LDLRP01130 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.58□□□□□ -2.16
LDLRP01130 AC095038.3-201ENST00000634439 195 ntBASIC1.58□□□□□ -2.16
LDLRP01130 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LDLRP01130 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LDLRP01130 SNORA25.7-201ENST00000364375 127 ntBASIC1.57□□□□□ -2.16
LDLRP01130 SNORA1-201ENST00000384107 130 ntBASIC1.57□□□□□ -2.16
LDLRP01130 MIR520G-201ENST00000385064 90 ntBASIC1.57□□□□□ -2.16
LDLRP01130 SNORD72-201ENST00000390994 80 ntBASIC1.57□□□□□ -2.16
LDLRP01130 SNORA40.5-201ENST00000391061 128 ntBASIC1.57□□□□□ -2.16
LDLRP01130 RN7SKP200-201ENST00000410564 320 ntBASIC1.57□□□□□ -2.16
LDLRP01130 MLLT10P1-201ENST00000418346 262 ntBASIC1.57□□□□□ -2.16
LDLRP01130 AL035461.1-201ENST00000421490 332 ntBASIC1.57□□□□□ -2.16
LDLRP01130 STAG3L5P-204ENST00000443759 179 ntBASIC1.57□□□□□ -2.16
LDLRP01130 RNU6-341P-201ENST00000516973 96 ntBASIC1.57□□□□□ -2.16
LDLRP01130 AC090142.3-201ENST00000519012 385 ntBASIC1.57□□□□□ -2.16
LDLRP01130 AC131055.1-201ENST00000584626 316 ntBASIC1.57□□□□□ -2.16
LDLRP01130 MIR8074-201ENST00000615081 81 ntBASIC1.57□□□□□ -2.16
LDLRP01130 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.57□□□□□ -2.16
LDLRP01130 AL391516.1-201ENST00000554380 2449 ntBASIC1.57□□□□□ -2.16
LDLRP01130 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.56□□□□□ -2.16
LDLRP01130 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LDLRP01130 SNORA1B-201ENST00000362535 133 ntBASIC1.56□□□□□ -2.16
LDLRP01130 Y_RNA.114-201ENST00000363265 113 ntBASIC1.56□□□□□ -2.16
LDLRP01130 Y_RNA.120-201ENST00000363304 110 ntBASIC1.56□□□□□ -2.16
LDLRP01130 RNU6-309P-201ENST00000364573 106 ntBASIC1.56□□□□□ -2.16
LDLRP01130 Y_RNA.265-201ENST00000364677 108 ntBASIC1.56□□□□□ -2.16
LDLRP01130 RNU6-203P-201ENST00000384038 104 ntBASIC1.56□□□□□ -2.16
LDLRP01130 RNU6-950P-201ENST00000384651 107 ntBASIC1.56□□□□□ -2.16
LDLRP01130 RNU6-1031P-201ENST00000384773 107 ntBASIC1.56□□□□□ -2.16
LDLRP01130 SNORA12.1-201ENST00000390873 148 ntBASIC1.56□□□□□ -2.16
LDLRP01130 MIR1267-201ENST00000408723 78 ntBASIC1.56□□□□□ -2.16
LDLRP01130 Y_RNA.630-201ENST00000411370 108 ntBASIC1.56□□□□□ -2.16
LDLRP01130 AL158147.1-201ENST00000443970 75 ntBASIC1.56□□□□□ -2.16
LDLRP01130 RNU6-919P-201ENST00000516731 104 ntBASIC1.56□□□□□ -2.16
LDLRP01130 RNU6-834P-201ENST00000362367 110 ntBASIC1.55□□□□□ -2.16
LDLRP01130 Y_RNA.52-201ENST00000362760 96 ntBASIC1.55□□□□□ -2.16
LDLRP01130 SNORD61-201ENST00000384252 73 ntBASIC1.55□□□□□ -2.16
LDLRP01130 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
LDLRP01130 MIR548A2-201ENST00000384956 97 ntBASIC1.55□□□□□ -2.16
LDLRP01130 MIR30A-201ENST00000385092 71 ntBASIC1.55□□□□□ -2.16
LDLRP01130 MIR891A-201ENST00000401237 79 ntBASIC1.55□□□□□ -2.16
LDLRP01130 FTH1P12-201ENST00000432137 551 ntBASIC1.55□□□□□ -2.16
LDLRP01130 SNRPGP10-201ENST00000432323 225 ntBASIC1.55□□□□□ -2.16
LDLRP01130 JTBP1-201ENST00000441314 247 ntBASIC1.55□□□□□ -2.16
LDLRP01130 AC009474.2-201ENST00000451383 136 ntBASIC1.55□□□□□ -2.16
LDLRP01130 RNU1-98P-201ENST00000458992 160 ntBASIC1.55□□□□□ -2.16
LDLRP01130 AC005908.1-201ENST00000468701 347 ntBASIC1.55□□□□□ -2.16
LDLRP01130 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.55□□□□□ -2.16
LDLRP01130 HMGN1P7-201ENST00000491722 313 ntBASIC1.55□□□□□ -2.16
LDLRP01130 AC090049.2-201ENST00000550377 109 ntBASIC1.55□□□□□ -2.16
LDLRP01130 AC008507.4-201ENST00000585464 127 ntBASIC1.55□□□□□ -2.16
LDLRP01130 AL365205.2-201ENST00000594586 68 ntBASIC1.55□□□□□ -2.16
LDLRP01130 AL591926.4-201ENST00000616895 298 ntBASIC1.55□□□□□ -2.16
LDLRP01130 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.55□□□□□ -2.16
LDLRP01130 MIR3914-2-201ENST00000637339 95 ntBASIC1.55□□□□□ -2.16
LDLRP01130 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
LDLRP01130 MTND5P32-201ENST00000560711 1802 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms