Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.55□□□□□ -2.66
SIX6O95475 MIR517A-201ENST00000385001 87 ntBASIC-1.55□□□□□ -2.66
SIX6O95475 AC074085.1-201ENST00000413598 418 ntBASIC-1.55□□□□□ -2.66
SIX6O95475 RNU7-55P-201ENST00000459426 62 ntBASIC-1.55□□□□□ -2.66
SIX6O95475 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.55□□□□□ -2.66
SIX6O95475 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.55□□□□□ -2.66
SIX6O95475 AP000676.1-201ENST00000533307 52 ntBASIC-1.55□□□□□ -2.66
SIX6O95475 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.55□□□□□ -2.66
SIX6O95475 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.55□□□□□ -2.66
SIX6O95475 AL022161.1-201ENST00000604390 213 ntBASIC-1.55□□□□□ -2.66
SIX6O95475 MIR4320-201ENST00000636981 65 ntBASIC-1.55□□□□□ -2.66
SIX6O95475 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.56□□□□□ -2.66
SIX6O95475 RNU6-938P-201ENST00000411285 103 ntBASIC-1.56□□□□□ -2.66
SIX6O95475 BX295541.1-201ENST00000417774 250 ntBASIC-1.56□□□□□ -2.66
SIX6O95475 MTND3P21-201ENST00000433774 331 ntBASIC-1.56□□□□□ -2.66
SIX6O95475 RNU7-96P-201ENST00000459535 64 ntBASIC-1.56□□□□□ -2.66
SIX6O95475 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.56□□□□□ -2.66
SIX6O95475 AP003357.1-201ENST00000604497 148 ntBASIC-1.56□□□□□ -2.66
SIX6O95475 AC022441.3-201ENST00000605737 136 ntBASIC-1.56□□□□□ -2.66
SIX6O95475 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.57□□□□□ -2.66
SIX6O95475 SNORA26.6-201ENST00000391256 115 ntBASIC-1.57□□□□□ -2.66
SIX6O95475 AP000533.3-201ENST00000447704 118 ntBASIC-1.57□□□□□ -2.66
SIX6O95475 FCF1P4-201ENST00000448326 183 ntBASIC-1.57□□□□□ -2.66
SIX6O95475 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.57□□□□□ -2.66
SIX6O95475 AC127455.1-201ENST00000565496 145 ntBASIC-1.57□□□□□ -2.66
SIX6O95475 RNU6-595P-201ENST00000363944 107 ntBASIC-1.58□□□□□ -2.66
SIX6O95475 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.58□□□□□ -2.66
SIX6O95475 RNU1-141P-201ENST00000364623 158 ntBASIC-1.58□□□□□ -2.66
SIX6O95475 RNU6-128P-201ENST00000383976 107 ntBASIC-1.58□□□□□ -2.66
SIX6O95475 SNORA40.3-201ENST00000390964 122 ntBASIC-1.58□□□□□ -2.66
SIX6O95475 MIR1278-201ENST00000408753 81 ntBASIC-1.58□□□□□ -2.66
SIX6O95475 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.58□□□□□ -2.66
SIX6O95475 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.58□□□□□ -2.66
SIX6O95475 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.58□□□□□ -2.66
SIX6O95475 snoU13.13-201ENST00000458842 104 ntBASIC-1.58□□□□□ -2.66
SIX6O95475 SNORD11-201ENST00000459124 84 ntBASIC-1.58□□□□□ -2.66
SIX6O95475 RNU6-998P-201ENST00000515894 101 ntBASIC-1.58□□□□□ -2.66
SIX6O95475 SNORA18.6-201ENST00000516792 115 ntBASIC-1.58□□□□□ -2.66
SIX6O95475 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.58□□□□□ -2.66
SIX6O95475 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.58□□□□□ -2.66
SIX6O95475 AL354950.2-201ENST00000617939 290 ntBASIC-1.58□□□□□ -2.66
SIX6O95475 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.59□□□□□ -2.66
SIX6O95475 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.59□□□□□ -2.66
SIX6O95475 AL033528.1-201ENST00000453780 140 ntBASIC-1.59□□□□□ -2.66
SIX6O95475 RNU7-74P-201ENST00000459104 62 ntBASIC-1.59□□□□□ -2.66
SIX6O95475 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC-1.59□□□□□ -2.66
SIX6O95475 AC087752.4-201ENST00000605911 462 ntBASIC-1.59□□□□□ -2.66
SIX6O95475 MIR409-201ENST00000362237 79 ntBASIC-1.6□□□□□ -2.67
SIX6O95475 SNORD24-201ENST00000383884 75 ntBASIC-1.6□□□□□ -2.67
SIX6O95475 RNU6-95P-201ENST00000384697 107 ntBASIC-1.6□□□□□ -2.67
SIX6O95475 SNORD37.1-201ENST00000390968 65 ntBASIC-1.6□□□□□ -2.67
SIX6O95475 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.6□□□□□ -2.67
SIX6O95475 AC055872.1-201ENST00000570978 278 ntBASIC-1.6□□□□□ -2.67
SIX6O95475 AC018638.8-201ENST00000588755 281 ntBASIC-1.6□□□□□ -2.67
SIX6O95475 AL157392.4-201ENST00000609756 345 ntBASIC-1.6□□□□□ -2.67
SIX6O95475 AC145423.2-201ENST00000610631 239 ntBASIC-1.6□□□□□ -2.67
SIX6O95475 RNA5SP133-201ENST00000363368 119 ntBASIC-1.61□□□□□ -2.67
SIX6O95475 RNU6-154P-201ENST00000384306 106 ntBASIC-1.61□□□□□ -2.67
SIX6O95475 MTND1P11-201ENST00000456661 876 ntBASIC-1.61□□□□□ -2.67
SIX6O95475 RNU6-408P-201ENST00000515910 100 ntBASIC-1.61□□□□□ -2.67
SIX6O95475 RNU6-706P-201ENST00000517229 104 ntBASIC-1.61□□□□□ -2.67
SIX6O95475 AC069503.3-201ENST00000618674 145 ntBASIC-1.61□□□□□ -2.67
SIX6O95475 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 RNU4-28P-201ENST00000364739 141 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 RNY1P13-201ENST00000365030 105 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 RNU6-38P-201ENST00000384085 107 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 RNU6-318P-201ENST00000384283 103 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 RNU6-906P-201ENST00000384700 70 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 RNU7-87P-201ENST00000459343 62 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 RNU7-45P-201ENST00000459460 63 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 RNU6-436P-201ENST00000516171 114 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 RNU7-115P-201ENST00000516433 55 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 RNA5SP476-201ENST00000516613 103 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 SNORD36C-201ENST00000516733 66 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 YWHAEP2-201ENST00000580066 112 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 MIR4273-201ENST00000582824 84 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 MIR548AE1-201ENST00000583292 70 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 AC019193.3-201ENST00000609144 554 ntBASIC-1.62□□□□□ -2.67
SIX6O95475 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.63□□□□□ -2.67
SIX6O95475 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.63□□□□□ -2.67
SIX6O95475 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.63□□□□□ -2.67
SIX6O95475 MIR190B-201ENST00000401119 79 ntBASIC-1.63□□□□□ -2.67
SIX6O95475 MIR548H5-201ENST00000580314 60 ntBASIC-1.63□□□□□ -2.67
SIX6O95475 AC124303.1-201ENST00000605703 360 ntBASIC-1.63□□□□□ -2.67
SIX6O95475 AC122108.2-201ENST00000611946 526 ntBASIC-1.63□□□□□ -2.67
SIX6O95475 AC004223.4-201ENST00000612426 332 ntBASIC-1.63□□□□□ -2.67
SIX6O95475 RNU4-50P-201ENST00000364361 141 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 SNORD116-9-201ENST00000384000 95 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 SNORD116-3-201ENST00000384287 95 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 SNORD116-8-201ENST00000384365 95 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 SNORD116-7-201ENST00000384404 95 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 SNORD116-5-201ENST00000384462 95 ntBASIC-1.64□□□□□ -2.67
SIX6O95475 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.64□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms