Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 MIR4524B-201ENST00000581569 115 ntBASIC1.95□□□□□ -2.1
SCAF4O95104 AC021443.1-201ENST00000604478 211 ntBASIC1.95□□□□□ -2.1
SCAF4O95104 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SCAF4O95104 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SCAF4O95104 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-34-201ENST00000362441 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-12-201ENST00000362583 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-29-201ENST00000362834 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-9-201ENST00000362912 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-21-201ENST00000362963 81 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-14-201ENST00000363090 81 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-13-201ENST00000363358 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-41-201ENST00000363608 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-11-201ENST00000363616 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-5-201ENST00000363633 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-39-201ENST00000363694 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-4-201ENST00000363810 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-16-201ENST00000363887 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-6-201ENST00000363942 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-42-201ENST00000364273 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-15-201ENST00000364809 81 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 Y_RNA.298-201ENST00000364960 107 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-1-201ENST00000364961 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-26-201ENST00000365067 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-10-201ENST00000365073 81 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-43-201ENST00000365503 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-36-201ENST00000365629 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 RNU6-1104P-201ENST00000384723 104 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 MIR526A1-201ENST00000384897 85 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 MIR516B2-201ENST00000385190 85 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 RNA5SP212-201ENST00000391223 107 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 RNU2-40P-201ENST00000410833 196 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.94□□□□□ -2.1
SCAF4O95104 RNU7-34P-201ENST00000459394 64 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 RNU6-998P-201ENST00000515894 101 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 RNU7-70P-201ENST00000516941 66 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 AC090821.2-201ENST00000523552 176 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 MIR4709-201ENST00000577272 72 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 SNORD115-40-201ENST00000606510 82 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 AL513423.1-201ENST00000621695 132 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 AL035470.1-201ENST00000622571 220 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 AL596211.1-201ENST00000569873 2277 ntBASIC1.94□□□□□ -2.1
SCAF4O95104 RNA5SP276-201ENST00000362580 94 ntBASIC1.93□□□□□ -2.1
SCAF4O95104 RNU6-106P-201ENST00000384405 107 ntBASIC1.93□□□□□ -2.1
SCAF4O95104 MIR660-201ENST00000385235 97 ntBASIC1.93□□□□□ -2.1
SCAF4O95104 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SCAF4O95104 MIR1267-201ENST00000408723 78 ntBASIC1.93□□□□□ -2.1
SCAF4O95104 RNU7-123P-201ENST00000515911 60 ntBASIC1.93□□□□□ -2.1
SCAF4O95104 RNU2-35P-201ENST00000516446 142 ntBASIC1.93□□□□□ -2.1
SCAF4O95104 RNA5SP481-201ENST00000516814 122 ntBASIC1.93□□□□□ -2.1
SCAF4O95104 SUMO2P16-201ENST00000519475 264 ntBASIC1.93□□□□□ -2.1
SCAF4O95104 MIR4448-201ENST00000584360 86 ntBASIC1.93□□□□□ -2.1
SCAF4O95104 uc_338.28-201ENST00000612082 187 ntBASIC1.93□□□□□ -2.1
SCAF4O95104 AL773524.1-201ENST00000614065 229 ntBASIC1.93□□□□□ -2.1
SCAF4O95104 MIR6817-201ENST00000615588 66 ntBASIC1.93□□□□□ -2.1
SCAF4O95104 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SCAF4O95104 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.92□□□□□ -2.1
SCAF4O95104 MIR342-201ENST00000362212 99 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 Y_RNA.85-201ENST00000363014 111 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 Y_RNA.454-201ENST00000384224 113 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 MIR452-201ENST00000385020 85 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 AC244636.1-201ENST00000421152 228 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 SNX2P2-201ENST00000424553 323 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 PGBD4P5-201ENST00000445958 426 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 RNU7-164P-201ENST00000459221 62 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 RNU7-96P-201ENST00000459535 64 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 RPL23AP42-201ENST00000471152 471 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 RPS29P24-201ENST00000486345 171 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 RNU2-13P-201ENST00000515909 113 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 RNA5SP148-201ENST00000516527 94 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 SNORA31.17-201ENST00000516953 127 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.92□□□□□ -2.1
SCAF4O95104 AC022523.2-201ENST00000561045 150 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 MIR4778-201ENST00000577635 80 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 MIR4679-2-201ENST00000578358 77 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 MIR3683-201ENST00000580847 82 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 MIR4305-201ENST00000583252 102 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 MIR1291-201ENST00000627649 87 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.92□□□□□ -2.1
SCAF4O95104 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
SCAF4O95104 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SCAF4O95104 Y_RNA.116-201ENST00000363292 103 ntBASIC1.91□□□□□ -2.1
SCAF4O95104 RNA5SP68-201ENST00000363885 119 ntBASIC1.91□□□□□ -2.1
SCAF4O95104 RNU4-16P-201ENST00000364737 141 ntBASIC1.91□□□□□ -2.1
SCAF4O95104 RNU6-1107P-201ENST00000364817 104 ntBASIC1.91□□□□□ -2.1
SCAF4O95104 SNORD12C-201ENST00000386307 89 ntBASIC1.91□□□□□ -2.1
SCAF4O95104 AC104435.1-201ENST00000483483 166 ntBASIC1.91□□□□□ -2.1
SCAF4O95104 AC008413.1-201ENST00000511864 177 ntBASIC1.91□□□□□ -2.1
SCAF4O95104 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SCAF4O95104 MIR424-201ENST00000362227 98 ntBASIC1.9□□□□□ -2.11
SCAF4O95104 MIR504-201ENST00000385065 83 ntBASIC1.9□□□□□ -2.11
SCAF4O95104 MIR136-201ENST00000385207 82 ntBASIC1.9□□□□□ -2.11
SCAF4O95104 SNORD28B-201ENST00000390993 75 ntBASIC1.9□□□□□ -2.11
SCAF4O95104 AL359511.1-201ENST00000402970 211 ntBASIC1.9□□□□□ -2.11
SCAF4O95104 RNU6-554P-201ENST00000410466 106 ntBASIC1.9□□□□□ -2.11
SCAF4O95104 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.9□□□□□ -2.11
SCAF4O95104 RNA5SP320-201ENST00000516263 124 ntBASIC1.9□□□□□ -2.11
SCAF4O95104 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms