Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 RNU6-44P-201ENST00000384045 107 ntBASIC2□□□□□ -2.09
CDKL5O76039 RNU6-429P-201ENST00000384582 108 ntBASIC2□□□□□ -2.09
CDKL5O76039 RNU6-296P-201ENST00000384608 107 ntBASIC2□□□□□ -2.09
CDKL5O76039 U8.16-201ENST00000391279 133 ntBASIC2□□□□□ -2.09
CDKL5O76039 RN7SKP200-201ENST00000410564 320 ntBASIC2□□□□□ -2.09
CDKL5O76039 MTATP6P21-201ENST00000440681 189 ntBASIC2□□□□□ -2.09
CDKL5O76039 HMGN2P32-201ENST00000444648 269 ntBASIC2□□□□□ -2.09
CDKL5O76039 RPL23AP63-201ENST00000498752 471 ntBASIC2□□□□□ -2.09
CDKL5O76039 CYCTP-201ENST00000504253 315 ntBASIC2□□□□□ -2.09
CDKL5O76039 SNORD33.1-201ENST00000516213 88 ntBASIC2□□□□□ -2.09
CDKL5O76039 SNORD36C-201ENST00000516733 66 ntBASIC2□□□□□ -2.09
CDKL5O76039 IGKV1-22-201ENST00000524313 326 ntBASIC2□□□□□ -2.09
CDKL5O76039 MIR4529-201ENST00000578110 78 ntBASIC2□□□□□ -2.09
CDKL5O76039 AC134878.1-201ENST00000619901 243 ntBASIC2□□□□□ -2.09
CDKL5O76039 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2□□□□□ -2.09
CDKL5O76039 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
CDKL5O76039 RNU6-834P-201ENST00000362367 110 ntBASIC1.99□□□□□ -2.09
CDKL5O76039 Y_RNA.37-201ENST00000362606 108 ntBASIC1.99□□□□□ -2.09
CDKL5O76039 RNU6-112P-201ENST00000363599 104 ntBASIC1.99□□□□□ -2.09
CDKL5O76039 RNU6-1056P-201ENST00000383996 107 ntBASIC1.99□□□□□ -2.09
CDKL5O76039 RNU6-424P-201ENST00000384367 105 ntBASIC1.99□□□□□ -2.09
CDKL5O76039 RNU6-1064P-201ENST00000410626 104 ntBASIC1.99□□□□□ -2.09
CDKL5O76039 RNU6-938P-201ENST00000411285 103 ntBASIC1.99□□□□□ -2.09
CDKL5O76039 AL035461.1-201ENST00000421490 332 ntBASIC1.99□□□□□ -2.09
CDKL5O76039 RNU6-919P-201ENST00000516731 104 ntBASIC1.99□□□□□ -2.09
CDKL5O76039 MIR6129-201ENST00000616087 109 ntBASIC1.99□□□□□ -2.09
CDKL5O76039 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.99□□□□□ -2.09
CDKL5O76039 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CDKL5O76039 RNU6-1189P-201ENST00000383958 107 ntBASIC1.98□□□□□ -2.09
CDKL5O76039 Y_RNA.410-201ENST00000383992 113 ntBASIC1.98□□□□□ -2.09
CDKL5O76039 RNU6-476P-201ENST00000384726 107 ntBASIC1.98□□□□□ -2.09
CDKL5O76039 RNU6-1031P-201ENST00000384773 107 ntBASIC1.98□□□□□ -2.09
CDKL5O76039 MIR520A-201ENST00000384862 85 ntBASIC1.98□□□□□ -2.09
CDKL5O76039 AL034345.1-201ENST00000407768 123 ntBASIC1.98□□□□□ -2.09
CDKL5O76039 RNA5SP450-201ENST00000411206 102 ntBASIC1.98□□□□□ -2.09
CDKL5O76039 RNA5SP168-201ENST00000516642 112 ntBASIC1.98□□□□□ -2.09
CDKL5O76039 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.98□□□□□ -2.09
CDKL5O76039 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.98□□□□□ -2.09
CDKL5O76039 MIR6845-201ENST00000613182 61 ntBASIC1.98□□□□□ -2.09
CDKL5O76039 AC027279.3-201ENST00000625055 122 ntBASIC1.98□□□□□ -2.09
CDKL5O76039 AL391516.1-201ENST00000554380 2449 ntBASIC1.98□□□□□ -2.09
CDKL5O76039 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
CDKL5O76039 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.97□□□□□ -2.09
CDKL5O76039 RNU6-1144P-201ENST00000384247 104 ntBASIC1.97□□□□□ -2.09
CDKL5O76039 RNU2-7P-201ENST00000410794 178 ntBASIC1.97□□□□□ -2.09
CDKL5O76039 RN7SKP19-201ENST00000516016 252 ntBASIC1.97□□□□□ -2.09
CDKL5O76039 RNU6-295P-201ENST00000516901 104 ntBASIC1.97□□□□□ -2.09
CDKL5O76039 MTND5P34-201ENST00000568888 325 ntBASIC1.97□□□□□ -2.09
CDKL5O76039 MIR4524B-201ENST00000581569 115 ntBASIC1.97□□□□□ -2.09
CDKL5O76039 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.97□□□□□ -2.09
CDKL5O76039 RNA5SP432-201ENST00000362480 116 ntBASIC1.96□□□□□ -2.1
CDKL5O76039 SNORA2.2-201ENST00000365473 135 ntBASIC1.96□□□□□ -2.1
CDKL5O76039 RNU6-950P-201ENST00000384651 107 ntBASIC1.96□□□□□ -2.1
CDKL5O76039 MIRLET7F2-201ENST00000385277 83 ntBASIC1.96□□□□□ -2.1
CDKL5O76039 RNU7-34P-201ENST00000459394 64 ntBASIC1.96□□□□□ -2.1
CDKL5O76039 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.96□□□□□ -2.1
CDKL5O76039 RNU6-250P-201ENST00000516958 103 ntBASIC1.96□□□□□ -2.1
CDKL5O76039 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.96□□□□□ -2.1
CDKL5O76039 DEFB122-202ENST00000569013 197 ntBASIC1.96□□□□□ -2.1
CDKL5O76039 MIR4299-201ENST00000577899 72 ntBASIC1.96□□□□□ -2.1
CDKL5O76039 MIR4255-201ENST00000579351 72 ntBASIC1.96□□□□□ -2.1
CDKL5O76039 U6.95-201ENST00000636931 70 ntBASIC1.96□□□□□ -2.1
CDKL5O76039 AL442644.1-201ENST00000454390 3105 ntBASIC1.96□□□□□ -2.1
CDKL5O76039 Y_RNA.440-201ENST00000384120 114 ntBASIC1.95□□□□□ -2.1
CDKL5O76039 SNORD38C-201ENST00000384381 69 ntBASIC1.95□□□□□ -2.1
CDKL5O76039 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.95□□□□□ -2.1
CDKL5O76039 AL591806.2-201ENST00000433122 173 ntBASIC1.95□□□□□ -2.1
CDKL5O76039 AC099513.1-201ENST00000490423 301 ntBASIC1.95□□□□□ -2.1
CDKL5O76039 AP003484.1-201ENST00000530974 250 ntBASIC1.95□□□□□ -2.1
CDKL5O76039 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.95□□□□□ -2.1
CDKL5O76039 AC021506.2-201ENST00000612354 169 ntBASIC1.95□□□□□ -2.1
CDKL5O76039 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CDKL5O76039 RNU6-833P-201ENST00000363486 107 ntBASIC1.94□□□□□ -2.1
CDKL5O76039 Y_RNA.366-201ENST00000365540 102 ntBASIC1.94□□□□□ -2.1
CDKL5O76039 RNA5SP100-201ENST00000410903 110 ntBASIC1.94□□□□□ -2.1
CDKL5O76039 RNA5SP59-201ENST00000410922 110 ntBASIC1.94□□□□□ -2.1
CDKL5O76039 AC015922.2-201ENST00000435593 184 ntBASIC1.94□□□□□ -2.1
CDKL5O76039 AC093850.1-201ENST00000454121 251 ntBASIC1.94□□□□□ -2.1
CDKL5O76039 snoU13.23-201ENST00000458863 104 ntBASIC1.94□□□□□ -2.1
CDKL5O76039 snoU13.27-201ENST00000459278 104 ntBASIC1.94□□□□□ -2.1
CDKL5O76039 RNU7-12P-201ENST00000516030 62 ntBASIC1.94□□□□□ -2.1
CDKL5O76039 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.94□□□□□ -2.1
CDKL5O76039 MIR502-201ENST00000606349 86 ntBASIC1.94□□□□□ -2.1
CDKL5O76039 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.94□□□□□ -2.1
CDKL5O76039 AC025166.1-201ENST00000612411 163 ntBASIC1.94□□□□□ -2.1
CDKL5O76039 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.94□□□□□ -2.1
CDKL5O76039 SNORA26.9-201ENST00000391322 122 ntBASIC1.93□□□□□ -2.1
CDKL5O76039 RNU6-240P-201ENST00000516098 97 ntBASIC1.93□□□□□ -2.1
CDKL5O76039 RNU6-113P-201ENST00000516653 101 ntBASIC1.93□□□□□ -2.1
CDKL5O76039 MIR4709-201ENST00000577272 72 ntBASIC1.93□□□□□ -2.1
CDKL5O76039 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDKL5O76039 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CDKL5O76039 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CDKL5O76039 MIR516B2-201ENST00000385190 85 ntBASIC1.92□□□□□ -2.1
CDKL5O76039 MIR764-201ENST00000390811 85 ntBASIC1.92□□□□□ -2.1
CDKL5O76039 RNY4P18-201ENST00000391107 89 ntBASIC1.92□□□□□ -2.1
CDKL5O76039 MIR1263-201ENST00000408324 86 ntBASIC1.92□□□□□ -2.1
CDKL5O76039 AC087499.4-201ENST00000448505 178 ntBASIC1.92□□□□□ -2.1
CDKL5O76039 AC108210.2-201ENST00000503681 201 ntBASIC1.92□□□□□ -2.1
CDKL5O76039 SNORA18.7-201ENST00000516910 131 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms