Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNU6-1018P-201ENST00000516577 106 ntBASIC2.4□□□□□ -2.03
TRIM13O60858 MIR4662A-201ENST00000637499 67 ntBASIC2.4□□□□□ -2.03
TRIM13O60858 AC006160.2-201ENST00000637708 154 ntBASIC2.4□□□□□ -2.03
TRIM13O60858 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM13O60858 AC092881.1-201ENST00000638218 2733 ntBASIC2.39□□□□□ -2.03
TRIM13O60858 AL442644.1-201ENST00000454390 3105 ntBASIC2.39□□□□□ -2.03
TRIM13O60858 SNORA38-201ENST00000363946 132 ntBASIC2.39□□□□□ -2.03
TRIM13O60858 RNU6-776P-201ENST00000364403 104 ntBASIC2.39□□□□□ -2.03
TRIM13O60858 RNU6-1022P-201ENST00000365049 104 ntBASIC2.39□□□□□ -2.03
TRIM13O60858 RNA5SP482-201ENST00000391269 118 ntBASIC2.39□□□□□ -2.03
TRIM13O60858 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.39□□□□□ -2.03
TRIM13O60858 TRBV12-1-201ENST00000479785 344 ntBASIC2.39□□□□□ -2.03
TRIM13O60858 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.39□□□□□ -2.03
TRIM13O60858 ELOCP29-201ENST00000588193 334 ntBASIC2.39□□□□□ -2.03
TRIM13O60858 SNORD115-34-201ENST00000362441 82 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-12-201ENST00000362583 82 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-29-201ENST00000362834 82 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-9-201ENST00000362912 82 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-21-201ENST00000362963 81 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-14-201ENST00000363090 81 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-41-201ENST00000363608 82 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-11-201ENST00000363616 82 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-5-201ENST00000363633 82 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-39-201ENST00000363694 82 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD116-10-201ENST00000363791 102 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-4-201ENST00000363810 82 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-6-201ENST00000363942 82 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-42-201ENST00000364273 82 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 Y_RNA.241-201ENST00000364470 117 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-15-201ENST00000364809 81 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-26-201ENST00000365067 82 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-10-201ENST00000365073 81 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 RNU1-51P-201ENST00000365345 176 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-43-201ENST00000365503 82 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-36-201ENST00000365629 82 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 CST2P1-201ENST00000425770 87 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.38□□□□□ -2.03
TRIM13O60858 ATP5J2P3-201ENST00000451550 258 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD109B-201ENST00000458961 67 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD109A-201ENST00000459128 67 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 RN7SL636P-201ENST00000497504 294 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 RN7SKP132-201ENST00000516001 208 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 AL161756.2-201ENST00000604597 246 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 AC067747.1-201ENST00000608026 250 ntBASIC2.38□□□□□ -2.03
TRIM13O60858 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.38□□□□□ -2.03
TRIM13O60858 SNORD115-2-201ENST00000362842 82 ntBASIC2.37□□□□□ -2.03
TRIM13O60858 Y_RNA.171-201ENST00000363760 102 ntBASIC2.37□□□□□ -2.03
TRIM13O60858 SNORD114-6-201ENST00000364393 72 ntBASIC2.37□□□□□ -2.03
TRIM13O60858 SNORD114-30-201ENST00000364448 72 ntBASIC2.37□□□□□ -2.03
TRIM13O60858 SNORD115-20-201ENST00000365099 82 ntBASIC2.37□□□□□ -2.03
TRIM13O60858 RNU6-616P-201ENST00000384353 107 ntBASIC2.37□□□□□ -2.03
TRIM13O60858 SNORD38C-201ENST00000384381 69 ntBASIC2.37□□□□□ -2.03
TRIM13O60858 Y_RNA.494-201ENST00000384432 111 ntBASIC2.37□□□□□ -2.03
TRIM13O60858 RNU6-1072P-201ENST00000384703 107 ntBASIC2.37□□□□□ -2.03
TRIM13O60858 RNU6-443P-201ENST00000384780 107 ntBASIC2.37□□□□□ -2.03
TRIM13O60858 MIR1262-201ENST00000408276 93 ntBASIC2.37□□□□□ -2.03
TRIM13O60858 RNU7-113P-201ENST00000459273 62 ntBASIC2.37□□□□□ -2.03
TRIM13O60858 AC090821.2-201ENST00000523552 176 ntBASIC2.37□□□□□ -2.03
TRIM13O60858 MIR4439-201ENST00000583746 80 ntBASIC2.37□□□□□ -2.03
TRIM13O60858 AL137790.1-201ENST00000634283 177 ntBASIC2.37□□□□□ -2.03
TRIM13O60858 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.37□□□□□ -2.03
TRIM13O60858 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TRIM13O60858 Y_RNA.4-201ENST00000362333 112 ntBASIC2.36□□□□□ -2.03
TRIM13O60858 RNU6-1313P-201ENST00000362622 102 ntBASIC2.36□□□□□ -2.03
TRIM13O60858 SNORD58A-201ENST00000383875 65 ntBASIC2.36□□□□□ -2.03
TRIM13O60858 RNY1P4-201ENST00000384595 115 ntBASIC2.36□□□□□ -2.03
TRIM13O60858 MIR1270-201ENST00000459320 83 ntBASIC2.36□□□□□ -2.03
TRIM13O60858 RNU7-28P-201ENST00000516759 62 ntBASIC2.36□□□□□ -2.03
TRIM13O60858 RNU6-1258P-201ENST00000516911 111 ntBASIC2.36□□□□□ -2.03
TRIM13O60858 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM13O60858 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM13O60858 Y_RNA.430-201ENST00000384081 110 ntBASIC2.35□□□□□ -2.03
TRIM13O60858 U8.15-201ENST00000390947 134 ntBASIC2.35□□□□□ -2.03
TRIM13O60858 SNORD77B-201ENST00000391112 67 ntBASIC2.35□□□□□ -2.03
TRIM13O60858 Y_RNA.611-201ENST00000410682 108 ntBASIC2.35□□□□□ -2.03
TRIM13O60858 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.35□□□□□ -2.03
TRIM13O60858 AL606517.2-201ENST00000442855 241 ntBASIC2.35□□□□□ -2.03
TRIM13O60858 AC114811.1-201ENST00000507207 168 ntBASIC2.35□□□□□ -2.03
TRIM13O60858 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM13O60858 RNA5SP320-201ENST00000516263 124 ntBASIC2.35□□□□□ -2.03
TRIM13O60858 SNORA31.11-201ENST00000516528 139 ntBASIC2.35□□□□□ -2.03
TRIM13O60858 MIR3126-201ENST00000577443 74 ntBASIC2.35□□□□□ -2.03
TRIM13O60858 MIR548AE2-201ENST00000583456 67 ntBASIC2.35□□□□□ -2.03
TRIM13O60858 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.35□□□□□ -2.03
TRIM13O60858 AC096720.1-201ENST00000604441 183 ntBASIC2.35□□□□□ -2.03
TRIM13O60858 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRIM13O60858 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM13O60858 RNU6-509P-201ENST00000363519 107 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 SNORA1.1-201ENST00000364671 133 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 RNU1-91P-201ENST00000364746 163 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 RNU6-652P-201ENST00000365488 107 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 SNORA70.4-201ENST00000365509 134 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 Y_RNA.470-201ENST00000384307 117 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 MIR29C-201ENST00000385231 88 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 RNU6-1319P-201ENST00000390855 104 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 RNU6-747P-201ENST00000390928 104 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 RNU6-241P-201ENST00000391148 104 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 RNU6-177P-201ENST00000411257 104 ntBASIC2.34□□□□□ -2.03
TRIM13O60858 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms