Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC091895.1-201ENST00000624494 256 ntBASIC1.49□□□□□ -2.17
LMX1BO60663 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LMX1BO60663 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LMX1BO60663 MTND5P32-201ENST00000560711 1802 ntBASIC1.48□□□□□ -2.17
LMX1BO60663 RNU6-661P-201ENST00000362409 107 ntBASIC1.48□□□□□ -2.17
LMX1BO60663 RNA5SP276-201ENST00000362580 94 ntBASIC1.48□□□□□ -2.17
LMX1BO60663 RNU6-833P-201ENST00000363486 107 ntBASIC1.48□□□□□ -2.17
LMX1BO60663 Y_RNA.294-201ENST00000364916 102 ntBASIC1.48□□□□□ -2.17
LMX1BO60663 RNU6-915P-201ENST00000364943 103 ntBASIC1.48□□□□□ -2.17
LMX1BO60663 RNU6-442P-201ENST00000383968 104 ntBASIC1.48□□□□□ -2.17
LMX1BO60663 RNU6-22P-201ENST00000384355 107 ntBASIC1.48□□□□□ -2.17
LMX1BO60663 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
LMX1BO60663 Y_RNA.584-201ENST00000391090 114 ntBASIC1.48□□□□□ -2.17
LMX1BO60663 AL034345.1-201ENST00000407768 123 ntBASIC1.48□□□□□ -2.17
LMX1BO60663 MIR548O-201ENST00000408583 114 ntBASIC1.48□□□□□ -2.17
LMX1BO60663 AP1B1P2-201ENST00000416196 106 ntBASIC1.48□□□□□ -2.17
LMX1BO60663 snoU13.27-201ENST00000459278 104 ntBASIC1.48□□□□□ -2.17
LMX1BO60663 CYCTP-201ENST00000504253 315 ntBASIC1.48□□□□□ -2.17
LMX1BO60663 MIR3122-201ENST00000577243 73 ntBASIC1.48□□□□□ -2.17
LMX1BO60663 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.48□□□□□ -2.17
LMX1BO60663 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
LMX1BO60663 Y_RNA.71-201ENST00000362892 104 ntBASIC1.47□□□□□ -2.17
LMX1BO60663 Y_RNA.120-201ENST00000363304 110 ntBASIC1.47□□□□□ -2.17
LMX1BO60663 RNU6-309P-201ENST00000364573 106 ntBASIC1.47□□□□□ -2.17
LMX1BO60663 MIR194-1-201ENST00000384892 85 ntBASIC1.47□□□□□ -2.17
LMX1BO60663 RNA5SP127-201ENST00000411051 133 ntBASIC1.47□□□□□ -2.17
LMX1BO60663 AC093850.1-201ENST00000454121 251 ntBASIC1.47□□□□□ -2.17
LMX1BO60663 Y_RNA.651-201ENST00000459380 103 ntBASIC1.47□□□□□ -2.17
LMX1BO60663 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.47□□□□□ -2.17
LMX1BO60663 RNU4-57P-201ENST00000515980 135 ntBASIC1.47□□□□□ -2.17
LMX1BO60663 AP001328.1-201ENST00000528550 176 ntBASIC1.47□□□□□ -2.17
LMX1BO60663 MIR3121-201ENST00000579680 77 ntBASIC1.47□□□□□ -2.17
LMX1BO60663 AC095038.3-201ENST00000634439 195 ntBASIC1.47□□□□□ -2.17
LMX1BO60663 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.17
LMX1BO60663 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
LMX1BO60663 Y_RNA.291-201ENST00000364886 113 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 RNU6-203P-201ENST00000384038 104 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 RNU6-163P-201ENST00000384396 106 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 RNU6-1117P-201ENST00000384525 104 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 RNU6-950P-201ENST00000384651 107 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 MIR499A-201ENST00000384903 122 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 RNU6-1168P-201ENST00000390831 104 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 AL161935.2-201ENST00000414627 60 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 RPL31P63-201ENST00000422565 375 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 RNU6-830P-201ENST00000516353 107 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 RNA5SP481-201ENST00000516814 122 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 RNU6-1234P-201ENST00000516877 103 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.46□□□□□ -2.18
LMX1BO60663 AC022254.1-201ENST00000567857 235 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 MIR4709-201ENST00000577272 72 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 MIR8070-201ENST00000616510 88 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.46□□□□□ -2.18
LMX1BO60663 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.45□□□□□ -2.18
LMX1BO60663 Y_RNA.37-201ENST00000362606 108 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 Y_RNA.242-201ENST00000364473 110 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 Y_RNA.261-201ENST00000364631 102 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 SNORA25.9-201ENST00000365087 128 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 Y_RNA.494-201ENST00000384432 111 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 SNORA22C-201ENST00000384614 134 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 MIR526A1-201ENST00000384897 85 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 RNU6-360P-201ENST00000390944 104 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 AL603914.1-201ENST00000401964 204 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 RNU2-7P-201ENST00000410794 178 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.45□□□□□ -2.18
LMX1BO60663 AC015922.2-201ENST00000435593 184 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 RNU6-1211P-201ENST00000459179 105 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.45□□□□□ -2.18
LMX1BO60663 RNU7-12P-201ENST00000516030 62 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 SNORA18.4-201ENST00000516440 124 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 SNORD36C-201ENST00000516733 66 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 DNAJC19P9-201ENST00000555084 351 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 MIR5197-201ENST00000583721 112 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 U7.2-201ENST00000607576 63 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 AL512598.1-201ENST00000610158 273 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 TUG1_4.1-201ENST00000619464 181 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 AL513423.1-201ENST00000621695 132 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.45□□□□□ -2.18
LMX1BO60663 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
LMX1BO60663 MIR424-201ENST00000362227 98 ntBASIC1.44□□□□□ -2.18
LMX1BO60663 Y_RNA.118-201ENST00000363300 101 ntBASIC1.44□□□□□ -2.18
LMX1BO60663 SNORD115-28-201ENST00000363931 81 ntBASIC1.44□□□□□ -2.18
LMX1BO60663 Y_RNA.525-201ENST00000384570 113 ntBASIC1.44□□□□□ -2.18
LMX1BO60663 MIR660-201ENST00000385235 97 ntBASIC1.44□□□□□ -2.18
LMX1BO60663 HMGN2P32-201ENST00000444648 269 ntBASIC1.44□□□□□ -2.18
LMX1BO60663 PGBD4P5-201ENST00000445958 426 ntBASIC1.44□□□□□ -2.18
LMX1BO60663 SNORA31.4-201ENST00000516049 129 ntBASIC1.44□□□□□ -2.18
LMX1BO60663 RNU6-479P-201ENST00000516348 105 ntBASIC1.44□□□□□ -2.18
LMX1BO60663 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.44□□□□□ -2.18
LMX1BO60663 MIR4778-201ENST00000577635 80 ntBASIC1.44□□□□□ -2.18
LMX1BO60663 MIR4303-201ENST00000581299 66 ntBASIC1.44□□□□□ -2.18
LMX1BO60663 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.44□□□□□ -2.18
LMX1BO60663 AL773524.1-201ENST00000614065 229 ntBASIC1.44□□□□□ -2.18
LMX1BO60663 AC134878.1-201ENST00000619901 243 ntBASIC1.44□□□□□ -2.18
LMX1BO60663 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.44□□□□□ -2.18
LMX1BO60663 Y_RNA.127-201ENST00000363386 109 ntBASIC1.43□□□□□ -2.18
LMX1BO60663 Y_RNA.410-201ENST00000383992 113 ntBASIC1.43□□□□□ -2.18
LMX1BO60663 Y_RNA.440-201ENST00000384120 114 ntBASIC1.43□□□□□ -2.18
LMX1BO60663 RNU6-439P-201ENST00000384188 106 ntBASIC1.43□□□□□ -2.18
LMX1BO60663 Y_RNA.508-201ENST00000384502 114 ntBASIC1.43□□□□□ -2.18
LMX1BO60663 RNU7-34P-201ENST00000459394 64 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms