Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 Y_RNA.354-201ENST00000365448 111 ntBASIC3.28□□□□□ -1.88
GFRA3O60609 RNU6-1051P-201ENST00000365471 102 ntBASIC3.28□□□□□ -1.88
GFRA3O60609 RNU2-48P-201ENST00000410694 191 ntBASIC3.28□□□□□ -1.88
GFRA3O60609 EEF1A1P41-201ENST00000414667 207 ntBASIC3.28□□□□□ -1.88
GFRA3O60609 AC022018.1-201ENST00000430685 241 ntBASIC3.28□□□□□ -1.88
GFRA3O60609 STAG3L5P-204ENST00000443759 179 ntBASIC3.28□□□□□ -1.88
GFRA3O60609 AL357552.1-201ENST00000445254 415 ntBASIC3.28□□□□□ -1.88
GFRA3O60609 RPS29P31-201ENST00000446147 164 ntBASIC3.28□□□□□ -1.88
GFRA3O60609 MIR4500-201ENST00000579472 76 ntBASIC3.28□□□□□ -1.88
GFRA3O60609 MIR2682-201ENST00000580305 110 ntBASIC3.28□□□□□ -1.88
GFRA3O60609 SNORD14A-201ENST00000606526 91 ntBASIC3.28□□□□□ -1.88
GFRA3O60609 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.28□□□□□ -1.88
GFRA3O60609 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
GFRA3O60609 AL356274.2-201ENST00000624379 3752 ntBASIC3.27□□□□□ -1.89
GFRA3O60609 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
GFRA3O60609 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
GFRA3O60609 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
GFRA3O60609 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
GFRA3O60609 RNU6-571P-201ENST00000384128 107 ntBASIC3.27□□□□□ -1.89
GFRA3O60609 MIR516B2-201ENST00000385190 85 ntBASIC3.27□□□□□ -1.89
GFRA3O60609 AL603825.1-201ENST00000438481 80 ntBASIC3.27□□□□□ -1.89
GFRA3O60609 RPS27P21-201ENST00000486977 252 ntBASIC3.27□□□□□ -1.89
GFRA3O60609 AC133485.1-201ENST00000567176 124 ntBASIC3.27□□□□□ -1.89
GFRA3O60609 Z97988.1-201ENST00000637697 135 ntBASIC3.27□□□□□ -1.89
GFRA3O60609 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
GFRA3O60609 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
GFRA3O60609 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
GFRA3O60609 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
GFRA3O60609 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
GFRA3O60609 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
GFRA3O60609 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
GFRA3O60609 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
GFRA3O60609 AC062016.1-201ENST00000355719 319 ntBASIC3.26□□□□□ -1.89
GFRA3O60609 RNA5SP192-201ENST00000364404 120 ntBASIC3.26□□□□□ -1.89
GFRA3O60609 RN7SKP220-201ENST00000410611 288 ntBASIC3.26□□□□□ -1.89
GFRA3O60609 CST2P1-201ENST00000425770 87 ntBASIC3.26□□□□□ -1.89
GFRA3O60609 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC3.26□□□□□ -1.89
GFRA3O60609 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
GFRA3O60609 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
GFRA3O60609 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.26□□□□□ -1.89
GFRA3O60609 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
GFRA3O60609 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
GFRA3O60609 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.25□□□□□ -1.89
GFRA3O60609 IPO8P1-201ENST00000455509 3109 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 SNORA25.5-201ENST00000363782 126 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 RNU1-89P-201ENST00000384592 164 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 MIR516A2-201ENST00000384888 90 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 MIR516A1-201ENST00000385033 90 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 RNU6-604P-201ENST00000390917 100 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 RNA5SP109-201ENST00000391010 116 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 RNU6-466P-201ENST00000391224 103 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 RNU6-1254P-201ENST00000391266 104 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 AC105272.1-201ENST00000438604 198 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 AC108938.1-201ENST00000451204 136 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 ATP5J2P3-201ENST00000451550 258 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 AC093850.1-201ENST00000454121 251 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 snoU13.23-201ENST00000458863 104 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 AC008413.1-201ENST00000511864 177 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 MIR486-1-201ENST00000612171 68 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 MIR6076-201ENST00000617521 113 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.25□□□□□ -1.89
GFRA3O60609 AP001486.2-201ENST00000561652 5113 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 ZNF209P-201ENST00000593450 2304 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 MAPK10-373ENST00000641983 6772 ntBASIC3.25□□□□□ -1.89
GFRA3O60609 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
GFRA3O60609 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
GFRA3O60609 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.24□□□□□ -1.89
GFRA3O60609 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GFRA3O60609 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.24□□□□□ -1.89
GFRA3O60609 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
GFRA3O60609 SNORD114-6-201ENST00000364393 72 ntBASIC3.24□□□□□ -1.89
GFRA3O60609 RNU6-1237P-201ENST00000384777 107 ntBASIC3.24□□□□□ -1.89
GFRA3O60609 MIR660-201ENST00000385235 97 ntBASIC3.24□□□□□ -1.89
GFRA3O60609 U8.16-201ENST00000391279 133 ntBASIC3.24□□□□□ -1.89
GFRA3O60609 BX276092.1-201ENST00000427368 251 ntBASIC3.24□□□□□ -1.89
GFRA3O60609 snoU13.16-201ENST00000459350 104 ntBASIC3.24□□□□□ -1.89
GFRA3O60609 AC020914.4-201ENST00000597690 277 ntBASIC3.24□□□□□ -1.89
GFRA3O60609 MIR8054-201ENST00000620877 86 ntBASIC3.24□□□□□ -1.89
GFRA3O60609 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.23□□□□□ -1.89
GFRA3O60609 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
GFRA3O60609 RNU6-940P-201ENST00000363433 104 ntBASIC3.23□□□□□ -1.89
GFRA3O60609 SNORA71.1-201ENST00000364523 117 ntBASIC3.23□□□□□ -1.89
GFRA3O60609 RNU1-101P-201ENST00000391171 127 ntBASIC3.23□□□□□ -1.89
GFRA3O60609 RN7SKP132-201ENST00000516001 208 ntBASIC3.23□□□□□ -1.89
GFRA3O60609 AC138749.4-201ENST00000563970 127 ntBASIC3.23□□□□□ -1.89
GFRA3O60609 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.23□□□□□ -1.89
GFRA3O60609 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
GFRA3O60609 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
GFRA3O60609 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
GFRA3O60609 WWP1P1-201ENST00000466609 2769 ntBASIC3.22□□□□□ -1.89
GFRA3O60609 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
GFRA3O60609 Y_RNA.537-201ENST00000384626 109 ntBASIC3.22□□□□□ -1.89
GFRA3O60609 RNU6-243P-201ENST00000391140 107 ntBASIC3.22□□□□□ -1.89
GFRA3O60609 AL161788.1-201ENST00000441805 169 ntBASIC3.22□□□□□ -1.89
GFRA3O60609 snoU13.15-201ENST00000459407 104 ntBASIC3.22□□□□□ -1.89
GFRA3O60609 RN7SL636P-201ENST00000497504 294 ntBASIC3.22□□□□□ -1.89
GFRA3O60609 RNU6-579P-201ENST00000516879 102 ntBASIC3.22□□□□□ -1.89
GFRA3O60609 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
GFRA3O60609 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
GFRA3O60609 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms