Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 SNORD38.2-201ENST00000384470 69 ntBASIC3.36□□□□□ -1.87
ACTN4O43707 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ACTN4O43707 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ACTN4O43707 RN7SKP123-201ENST00000410732 291 ntBASIC3.36□□□□□ -1.87
ACTN4O43707 snoU13.22-201ENST00000459428 104 ntBASIC3.36□□□□□ -1.87
ACTN4O43707 SNORD67.1-201ENST00000516618 108 ntBASIC3.36□□□□□ -1.87
ACTN4O43707 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.36□□□□□ -1.87
ACTN4O43707 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.36□□□□□ -1.87
ACTN4O43707 MIR22-201ENST00000362190 85 ntBASIC3.35□□□□□ -1.87
ACTN4O43707 RNU6-315P-201ENST00000362666 107 ntBASIC3.35□□□□□ -1.87
ACTN4O43707 RNA5SP138-201ENST00000365098 114 ntBASIC3.35□□□□□ -1.87
ACTN4O43707 RNU6-1067P-201ENST00000384752 107 ntBASIC3.35□□□□□ -1.87
ACTN4O43707 SNORD28B-201ENST00000390993 75 ntBASIC3.35□□□□□ -1.87
ACTN4O43707 SNORA11.1-201ENST00000408133 129 ntBASIC3.35□□□□□ -1.87
ACTN4O43707 RN7SKP220-201ENST00000410611 288 ntBASIC3.35□□□□□ -1.87
ACTN4O43707 RNU6-1086P-201ENST00000410930 100 ntBASIC3.35□□□□□ -1.87
ACTN4O43707 RPS29P6-201ENST00000438196 145 ntBASIC3.35□□□□□ -1.87
ACTN4O43707 SNORD123-201ENST00000459473 70 ntBASIC3.35□□□□□ -1.87
ACTN4O43707 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.35□□□□□ -1.87
ACTN4O43707 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.35□□□□□ -1.87
ACTN4O43707 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.35□□□□□ -1.87
ACTN4O43707 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ACTN4O43707 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
ACTN4O43707 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
ACTN4O43707 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ACTN4O43707 SNORD21-201ENST00000383953 95 ntBASIC3.34□□□□□ -1.87
ACTN4O43707 RNU6-480P-201ENST00000384332 107 ntBASIC3.34□□□□□ -1.87
ACTN4O43707 MIR181B2-201ENST00000385004 89 ntBASIC3.34□□□□□ -1.87
ACTN4O43707 MIR34B-201ENST00000385076 84 ntBASIC3.34□□□□□ -1.87
ACTN4O43707 AC093850.1-201ENST00000454121 251 ntBASIC3.34□□□□□ -1.87
ACTN4O43707 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.34□□□□□ -1.87
ACTN4O43707 AC234781.5-201ENST00000508429 271 ntBASIC3.34□□□□□ -1.87
ACTN4O43707 AC008885.1-201ENST00000514930 301 ntBASIC3.34□□□□□ -1.87
ACTN4O43707 MTND5P40-201ENST00000559945 246 ntBASIC3.34□□□□□ -1.87
ACTN4O43707 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.34□□□□□ -1.87
ACTN4O43707 AC012676.2-201ENST00000619258 186 ntBASIC3.34□□□□□ -1.87
ACTN4O43707 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.34□□□□□ -1.87
ACTN4O43707 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
ACTN4O43707 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
ACTN4O43707 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.33□□□□□ -1.88
ACTN4O43707 Y_RNA.173-201ENST00000363776 113 ntBASIC3.33□□□□□ -1.88
ACTN4O43707 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.33□□□□□ -1.88
ACTN4O43707 RPL23AP83-201ENST00000434984 473 ntBASIC3.33□□□□□ -1.88
ACTN4O43707 AC090255.1-201ENST00000495779 349 ntBASIC3.33□□□□□ -1.88
ACTN4O43707 AC026271.5-201ENST00000577873 130 ntBASIC3.33□□□□□ -1.88
ACTN4O43707 MIR5094-201ENST00000578766 85 ntBASIC3.33□□□□□ -1.88
ACTN4O43707 MIR5195-201ENST00000583555 115 ntBASIC3.33□□□□□ -1.88
ACTN4O43707 AC105081.1-201ENST00000617727 106 ntBASIC3.33□□□□□ -1.88
ACTN4O43707 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.33□□□□□ -1.88
ACTN4O43707 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ACTN4O43707 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ACTN4O43707 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.32□□□□□ -1.88
ACTN4O43707 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
ACTN4O43707 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.32□□□□□ -1.88
ACTN4O43707 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
ACTN4O43707 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ACTN4O43707 Y_RNA.168-201ENST00000363740 102 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 Y_RNA.354-201ENST00000365448 111 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 Y_RNA.537-201ENST00000384626 109 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 RNU6-1321P-201ENST00000390905 107 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 RNU6-129P-201ENST00000391022 107 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 RNU6-447P-201ENST00000410293 104 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 RNU6-1118P-201ENST00000410382 104 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 RNU6-1076P-201ENST00000410397 104 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 RNU6-355P-201ENST00000410427 104 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 RNU6-791P-201ENST00000410467 104 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 RNU6-705P-201ENST00000410601 104 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 RNU6-1100P-201ENST00000410691 104 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 RNU6-860P-201ENST00000410860 104 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 RNU6-1217P-201ENST00000411276 104 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 RNU6-785P-201ENST00000411324 104 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 RNU7-79P-201ENST00000516082 62 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.32□□□□□ -1.88
ACTN4O43707 MIR3616-201ENST00000584070 92 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 U6.90-201ENST00000614007 104 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 U4atac.1-201ENST00000618345 95 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 U6.70-201ENST00000620287 104 ntBASIC3.32□□□□□ -1.88
ACTN4O43707 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ACTN4O43707 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.31□□□□□ -1.88
ACTN4O43707 Y_RNA.98-201ENST00000363109 102 ntBASIC3.31□□□□□ -1.88
ACTN4O43707 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ACTN4O43707 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.31□□□□□ -1.88
ACTN4O43707 RNU6-519P-201ENST00000410590 108 ntBASIC3.31□□□□□ -1.88
ACTN4O43707 snoU13.16-201ENST00000459350 104 ntBASIC3.31□□□□□ -1.88
ACTN4O43707 AC114801.3-201ENST00000510231 177 ntBASIC3.31□□□□□ -1.88
ACTN4O43707 FAM106DP-201ENST00000586416 501 ntBASIC3.31□□□□□ -1.88
ACTN4O43707 AC020891.4-201ENST00000605745 93 ntBASIC3.31□□□□□ -1.88
ACTN4O43707 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ACTN4O43707 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ACTN4O43707 RNU6-1094P-201ENST00000362416 104 ntBASIC3.3□□□□□ -1.88
ACTN4O43707 SNORD114-10-201ENST00000363409 72 ntBASIC3.3□□□□□ -1.88
ACTN4O43707 RNU6-1031P-201ENST00000384773 107 ntBASIC3.3□□□□□ -1.88
ACTN4O43707 RNU7-48P-201ENST00000458875 63 ntBASIC3.3□□□□□ -1.88
ACTN4O43707 RNU7-153P-201ENST00000516455 62 ntBASIC3.3□□□□□ -1.88
ACTN4O43707 SNORA31.26-201ENST00000517250 137 ntBASIC3.3□□□□□ -1.88
ACTN4O43707 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.3□□□□□ -1.88
ACTN4O43707 MIR8055-201ENST00000610739 97 ntBASIC3.3□□□□□ -1.88
ACTN4O43707 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ACTN4O43707 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ACTN4O43707 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 199.3 ms