Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.52□□□□□ -2.17
NCK2O43639 MIR4764-201ENST00000580680 88 ntBASIC1.52□□□□□ -2.17
NCK2O43639 MIR7974-201ENST00000615835 79 ntBASIC1.52□□□□□ -2.17
NCK2O43639 Y_RNA.547-201ENST00000384654 119 ntBASIC1.51□□□□□ -2.17
NCK2O43639 MT-TT-201ENST00000387460 66 ntBASIC1.51□□□□□ -2.17
NCK2O43639 SNRPGP8-201ENST00000454064 226 ntBASIC1.51□□□□□ -2.17
NCK2O43639 RNU4-57P-201ENST00000515980 135 ntBASIC1.51□□□□□ -2.17
NCK2O43639 SNORA31.4-201ENST00000516049 129 ntBASIC1.51□□□□□ -2.17
NCK2O43639 RNU6-197P-201ENST00000516680 100 ntBASIC1.51□□□□□ -2.17
NCK2O43639 RNU6-453P-201ENST00000516819 85 ntBASIC1.51□□□□□ -2.17
NCK2O43639 AC022709.1-201ENST00000615967 87 ntBASIC1.51□□□□□ -2.17
NCK2O43639 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.51□□□□□ -2.17
NCK2O43639 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
NCK2O43639 MIR411-201ENST00000362239 96 ntBASIC1.5□□□□□ -2.17
NCK2O43639 RNU6-379P-201ENST00000363813 104 ntBASIC1.5□□□□□ -2.17
NCK2O43639 Y_RNA.634-201ENST00000364811 113 ntBASIC1.5□□□□□ -2.17
NCK2O43639 AC107297.1-201ENST00000459991 176 ntBASIC1.5□□□□□ -2.17
NCK2O43639 AL133373.1-201ENST00000497098 94 ntBASIC1.5□□□□□ -2.17
NCK2O43639 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.5□□□□□ -2.17
NCK2O43639 RNU7-25P-201ENST00000516544 62 ntBASIC1.5□□□□□ -2.17
NCK2O43639 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
NCK2O43639 SNORD45.3-201ENST00000363836 72 ntBASIC1.49□□□□□ -2.17
NCK2O43639 SNORD115-28-201ENST00000363931 81 ntBASIC1.49□□□□□ -2.17
NCK2O43639 RNU4-70P-201ENST00000384579 139 ntBASIC1.49□□□□□ -2.17
NCK2O43639 Y_RNA.537-201ENST00000384626 109 ntBASIC1.49□□□□□ -2.17
NCK2O43639 Y_RNA.571-201ENST00000384753 98 ntBASIC1.49□□□□□ -2.17
NCK2O43639 RNU6-578P-201ENST00000390980 103 ntBASIC1.49□□□□□ -2.17
NCK2O43639 RNU6-847P-201ENST00000411115 108 ntBASIC1.49□□□□□ -2.17
NCK2O43639 RNU1-98P-201ENST00000458992 160 ntBASIC1.49□□□□□ -2.17
NCK2O43639 Y_RNA.666-201ENST00000516187 112 ntBASIC1.49□□□□□ -2.17
NCK2O43639 RNU6-947P-201ENST00000516264 106 ntBASIC1.49□□□□□ -2.17
NCK2O43639 MIR150-201ENST00000385048 84 ntBASIC1.48□□□□□ -2.17
NCK2O43639 RNU6-493P-201ENST00000391321 108 ntBASIC1.48□□□□□ -2.17
NCK2O43639 Y_RNA.622-201ENST00000411091 108 ntBASIC1.48□□□□□ -2.17
NCK2O43639 AC245047.7-201ENST00000440265 293 ntBASIC1.48□□□□□ -2.17
NCK2O43639 RPS29P29-201ENST00000456396 171 ntBASIC1.48□□□□□ -2.17
NCK2O43639 Y_RNA.797-201ENST00000515977 94 ntBASIC1.48□□□□□ -2.17
NCK2O43639 RNU6-693P-201ENST00000516134 107 ntBASIC1.48□□□□□ -2.17
NCK2O43639 Y_RNA.700-201ENST00000516806 100 ntBASIC1.48□□□□□ -2.17
NCK2O43639 AC109810.1-201ENST00000534066 224 ntBASIC1.48□□□□□ -2.17
NCK2O43639 AC068338.1-201ENST00000565567 176 ntBASIC1.48□□□□□ -2.17
NCK2O43639 AL096861.1-201ENST00000610899 123 ntBASIC1.48□□□□□ -2.17
NCK2O43639 MIR6515-201ENST00000619843 57 ntBASIC1.48□□□□□ -2.17
NCK2O43639 AC134878.1-201ENST00000619901 243 ntBASIC1.48□□□□□ -2.17
NCK2O43639 Y_RNA.66-201ENST00000362862 102 ntBASIC1.47□□□□□ -2.17
NCK2O43639 RNU6-1020P-201ENST00000363684 107 ntBASIC1.47□□□□□ -2.17
NCK2O43639 RNY3P16-201ENST00000516338 101 ntBASIC1.47□□□□□ -2.17
NCK2O43639 MIR4308-201ENST00000580634 81 ntBASIC1.47□□□□□ -2.17
NCK2O43639 MIR548AR-201ENST00000582191 57 ntBASIC1.47□□□□□ -2.17
NCK2O43639 AC108706.1-201ENST00000611053 297 ntBASIC1.47□□□□□ -2.17
NCK2O43639 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.47□□□□□ -2.17
NCK2O43639 AC008133.2-201ENST00000624540 351 ntBASIC1.47□□□□□ -2.17
NCK2O43639 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
NCK2O43639 SNORD115-34-201ENST00000362441 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-12-201ENST00000362583 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-29-201ENST00000362834 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-9-201ENST00000362912 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 Y_RNA.75-201ENST00000362927 97 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-21-201ENST00000362963 81 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-14-201ENST00000363090 81 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-13-201ENST00000363358 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-41-201ENST00000363608 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-11-201ENST00000363616 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-5-201ENST00000363633 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-39-201ENST00000363694 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-4-201ENST00000363810 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-16-201ENST00000363887 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-6-201ENST00000363942 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-42-201ENST00000364273 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 RNU1-93P-201ENST00000364704 169 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-15-201ENST00000364809 81 ntBASIC1.46□□□□□ -2.18
NCK2O43639 RNU6-275P-201ENST00000364910 107 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-1-201ENST00000364961 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-26-201ENST00000365067 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-10-201ENST00000365073 81 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-43-201ENST00000365503 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-36-201ENST00000365629 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 Y_RNA.410-201ENST00000383992 113 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD61-201ENST00000384252 73 ntBASIC1.46□□□□□ -2.18
NCK2O43639 MIR518F-201ENST00000384973 87 ntBASIC1.46□□□□□ -2.18
NCK2O43639 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.46□□□□□ -2.18
NCK2O43639 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.46□□□□□ -2.18
NCK2O43639 AL121914.1-201ENST00000450188 156 ntBASIC1.46□□□□□ -2.18
NCK2O43639 RNU2-4P-201ENST00000606190 192 ntBASIC1.46□□□□□ -2.18
NCK2O43639 SNORD115-40-201ENST00000606510 82 ntBASIC1.46□□□□□ -2.18
NCK2O43639 RNU6-923P-201ENST00000364753 107 ntBASIC1.45□□□□□ -2.18
NCK2O43639 Y_RNA.354-201ENST00000365448 111 ntBASIC1.45□□□□□ -2.18
NCK2O43639 SNORA70.7-201ENST00000384159 133 ntBASIC1.45□□□□□ -2.18
NCK2O43639 Y_RNA.542-201ENST00000384641 111 ntBASIC1.45□□□□□ -2.18
NCK2O43639 SNORD12-201ENST00000391002 90 ntBASIC1.45□□□□□ -2.18
NCK2O43639 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.45□□□□□ -2.18
NCK2O43639 AL138752.1-201ENST00000452964 351 ntBASIC1.45□□□□□ -2.18
NCK2O43639 SNORA31.2-201ENST00000516019 134 ntBASIC1.45□□□□□ -2.18
NCK2O43639 RNU6-1223P-201ENST00000517124 104 ntBASIC1.45□□□□□ -2.18
NCK2O43639 AC130289.1-201ENST00000577321 73 ntBASIC1.45□□□□□ -2.18
NCK2O43639 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.45□□□□□ -2.18
NCK2O43639 Y_RNA.91-201ENST00000363042 107 ntBASIC1.44□□□□□ -2.18
NCK2O43639 RNU6-342P-201ENST00000384521 104 ntBASIC1.44□□□□□ -2.18
NCK2O43639 MIR548A2-201ENST00000384956 97 ntBASIC1.44□□□□□ -2.18
NCK2O43639 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms