Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 SNORA26.9-201ENST00000391322 122 ntBASIC1.64□□□□□ -2.15
PHGDHO43175 AC087499.4-201ENST00000448505 178 ntBASIC1.64□□□□□ -2.15
PHGDHO43175 SNORD36C-201ENST00000516733 66 ntBASIC1.64□□□□□ -2.15
PHGDHO43175 MIR3664-201ENST00000579074 99 ntBASIC1.64□□□□□ -2.15
PHGDHO43175 MIR4764-201ENST00000580680 88 ntBASIC1.64□□□□□ -2.15
PHGDHO43175 MIR548AR-201ENST00000582191 57 ntBASIC1.64□□□□□ -2.15
PHGDHO43175 AP001485.1-201ENST00000604799 199 ntBASIC1.64□□□□□ -2.15
PHGDHO43175 AP000648.3-201ENST00000623539 4507 ntBASIC1.64□□□□□ -2.15
PHGDHO43175 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
PHGDHO43175 SNORA25.7-201ENST00000364375 127 ntBASIC1.63□□□□□ -2.15
PHGDHO43175 Y_RNA.370-201ENST00000365589 108 ntBASIC1.63□□□□□ -2.15
PHGDHO43175 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
PHGDHO43175 SNORD37.2-201ENST00000391075 66 ntBASIC1.63□□□□□ -2.15
PHGDHO43175 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.63□□□□□ -2.15
PHGDHO43175 SUMO1P3-201ENST00000439961 304 ntBASIC1.63□□□□□ -2.15
PHGDHO43175 RPL39P39-201ENST00000455840 151 ntBASIC1.63□□□□□ -2.15
PHGDHO43175 RNA5SP272-201ENST00000516095 111 ntBASIC1.63□□□□□ -2.15
PHGDHO43175 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.63□□□□□ -2.15
PHGDHO43175 Y_RNA.241-201ENST00000364470 117 ntBASIC1.62□□□□□ -2.15
PHGDHO43175 RNU6-125P-201ENST00000384505 107 ntBASIC1.62□□□□□ -2.15
PHGDHO43175 Y_RNA.542-201ENST00000384641 111 ntBASIC1.62□□□□□ -2.15
PHGDHO43175 MIR1289-2-201ENST00000408360 111 ntBASIC1.62□□□□□ -2.15
PHGDHO43175 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.62□□□□□ -2.15
PHGDHO43175 RN7SKP88-201ENST00000516847 250 ntBASIC1.62□□□□□ -2.15
PHGDHO43175 AP003484.1-201ENST00000530974 250 ntBASIC1.62□□□□□ -2.15
PHGDHO43175 MIR3133-201ENST00000583157 78 ntBASIC1.62□□□□□ -2.15
PHGDHO43175 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.62□□□□□ -2.15
PHGDHO43175 7SK.8-201ENST00000612110 250 ntBASIC1.62□□□□□ -2.15
PHGDHO43175 MIR6845-201ENST00000613182 61 ntBASIC1.62□□□□□ -2.15
PHGDHO43175 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
PHGDHO43175 7SK.11-201ENST00000615477 250 ntBASIC1.62□□□□□ -2.15
PHGDHO43175 MIR6715A-201ENST00000615929 79 ntBASIC1.62□□□□□ -2.15
PHGDHO43175 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.62□□□□□ -2.15
PHGDHO43175 7SK.13-201ENST00000622040 250 ntBASIC1.62□□□□□ -2.15
PHGDHO43175 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.62□□□□□ -2.15
PHGDHO43175 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
PHGDHO43175 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
PHGDHO43175 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
PHGDHO43175 Y_RNA.410-201ENST00000383992 113 ntBASIC1.61□□□□□ -2.15
PHGDHO43175 RNU6-1067P-201ENST00000384752 107 ntBASIC1.61□□□□□ -2.15
PHGDHO43175 MIR570-201ENST00000384917 97 ntBASIC1.61□□□□□ -2.15
PHGDHO43175 AC107297.1-201ENST00000459991 176 ntBASIC1.61□□□□□ -2.15
PHGDHO43175 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.61□□□□□ -2.15
PHGDHO43175 AL365205.2-201ENST00000594586 68 ntBASIC1.61□□□□□ -2.15
PHGDHO43175 MIR7843-201ENST00000622274 79 ntBASIC1.61□□□□□ -2.15
PHGDHO43175 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.61□□□□□ -2.15
PHGDHO43175 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PHGDHO43175 RNU6-1189P-201ENST00000383958 107 ntBASIC1.6□□□□□ -2.15
PHGDHO43175 Y_RNA.400-201ENST00000383963 111 ntBASIC1.6□□□□□ -2.15
PHGDHO43175 RNU6-548P-201ENST00000517083 115 ntBASIC1.6□□□□□ -2.15
PHGDHO43175 RNU6-165P-201ENST00000517170 99 ntBASIC1.6□□□□□ -2.15
PHGDHO43175 AC090821.2-201ENST00000523552 176 ntBASIC1.6□□□□□ -2.15
PHGDHO43175 AC112693.2-201ENST00000556538 232 ntBASIC1.6□□□□□ -2.15
PHGDHO43175 CYP3A52P-201ENST00000563326 91 ntBASIC1.6□□□□□ -2.15
PHGDHO43175 AL096861.1-201ENST00000610899 123 ntBASIC1.6□□□□□ -2.15
PHGDHO43175 SNORD115-34-201ENST00000362441 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-12-201ENST00000362583 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-29-201ENST00000362834 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-9-201ENST00000362912 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-21-201ENST00000362963 81 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-14-201ENST00000363090 81 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-13-201ENST00000363358 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-41-201ENST00000363608 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-11-201ENST00000363616 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-5-201ENST00000363633 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-39-201ENST00000363694 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-4-201ENST00000363810 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-16-201ENST00000363887 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-6-201ENST00000363942 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 Y_RNA.215-201ENST00000364204 112 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-42-201ENST00000364273 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-15-201ENST00000364809 81 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-1-201ENST00000364961 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-26-201ENST00000365067 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-10-201ENST00000365073 81 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-43-201ENST00000365503 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-36-201ENST00000365629 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 RNU6-187P-201ENST00000384139 106 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORA75.5-201ENST00000391291 81 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 AL627390.1-201ENST00000396055 340 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORA25.12-201ENST00000516202 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORA18.4-201ENST00000516440 124 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 MIR3646-201ENST00000578301 84 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 SNORD115-40-201ENST00000606510 82 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 AC008133.2-201ENST00000624540 351 ntBASIC1.59□□□□□ -2.15
PHGDHO43175 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.59□□□□□ -2.16
PHGDHO43175 MTND5P32-201ENST00000560711 1802 ntBASIC1.59□□□□□ -2.16
PHGDHO43175 RNU6-1292P-201ENST00000383856 107 ntBASIC1.58□□□□□ -2.16
PHGDHO43175 Y_RNA.497-201ENST00000384447 98 ntBASIC1.58□□□□□ -2.16
PHGDHO43175 SNORA20-201ENST00000384662 132 ntBASIC1.58□□□□□ -2.16
PHGDHO43175 SNORA40.5-201ENST00000391061 128 ntBASIC1.58□□□□□ -2.16
PHGDHO43175 RNA5SP127-201ENST00000411051 133 ntBASIC1.58□□□□□ -2.16
PHGDHO43175 RNU7-197P-201ENST00000458836 62 ntBASIC1.58□□□□□ -2.16
PHGDHO43175 snoU13.23-201ENST00000458863 104 ntBASIC1.58□□□□□ -2.16
PHGDHO43175 RPS26P48-201ENST00000491713 339 ntBASIC1.58□□□□□ -2.16
PHGDHO43175 RNU7-41P-201ENST00000515917 61 ntBASIC1.58□□□□□ -2.16
PHGDHO43175 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.58□□□□□ -2.16
PHGDHO43175 MTND1P7-201ENST00000632801 297 ntBASIC1.58□□□□□ -2.16
PHGDHO43175 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms