Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL606845.1-201ENST00000404881 255 ntBASIC1.21□□□□□ -2.22
ATP2A1O14983 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.21□□□□□ -2.22
ATP2A1O14983 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.21□□□□□ -2.22
ATP2A1O14983 Y_RNA.666-201ENST00000516187 112 ntBASIC1.21□□□□□ -2.22
ATP2A1O14983 RNU6-1299P-201ENST00000516316 100 ntBASIC1.21□□□□□ -2.22
ATP2A1O14983 RNU6-453P-201ENST00000516819 85 ntBASIC1.21□□□□□ -2.22
ATP2A1O14983 RMST_2.1-201ENST00000617263 136 ntBASIC1.21□□□□□ -2.22
ATP2A1O14983 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
ATP2A1O14983 RNA5SP48-201ENST00000363969 126 ntBASIC1.2□□□□□ -2.22
ATP2A1O14983 SNORA1.2-201ENST00000365189 134 ntBASIC1.2□□□□□ -2.22
ATP2A1O14983 Y_RNA.432-201ENST00000384087 111 ntBASIC1.2□□□□□ -2.22
ATP2A1O14983 RPS29P28-201ENST00000446439 141 ntBASIC1.2□□□□□ -2.22
ATP2A1O14983 RNU7-41P-201ENST00000515917 61 ntBASIC1.2□□□□□ -2.22
ATP2A1O14983 RNA5SP153-201ENST00000516498 76 ntBASIC1.2□□□□□ -2.22
ATP2A1O14983 RNU6-113P-201ENST00000516653 101 ntBASIC1.2□□□□□ -2.22
ATP2A1O14983 SNORA70.22-201ENST00000517160 124 ntBASIC1.2□□□□□ -2.22
ATP2A1O14983 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.2□□□□□ -2.22
ATP2A1O14983 MIR548AR-201ENST00000582191 57 ntBASIC1.2□□□□□ -2.22
ATP2A1O14983 SNORD114-21-201ENST00000606412 72 ntBASIC1.2□□□□□ -2.22
ATP2A1O14983 AC008133.2-201ENST00000624540 351 ntBASIC1.2□□□□□ -2.22
ATP2A1O14983 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
ATP2A1O14983 MIR373-201ENST00000362273 69 ntBASIC1.19□□□□□ -2.22
ATP2A1O14983 RNY1-201ENST00000364228 113 ntBASIC1.19□□□□□ -2.22
ATP2A1O14983 RNU6-1067P-201ENST00000384752 107 ntBASIC1.19□□□□□ -2.22
ATP2A1O14983 SNORD28B-201ENST00000390993 75 ntBASIC1.19□□□□□ -2.22
ATP2A1O14983 Y_RNA.618-201ENST00000410949 107 ntBASIC1.19□□□□□ -2.22
ATP2A1O14983 Y_RNA.626-201ENST00000411288 95 ntBASIC1.19□□□□□ -2.22
ATP2A1O14983 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.19□□□□□ -2.22
ATP2A1O14983 snoU13.25-201ENST00000458945 104 ntBASIC1.19□□□□□ -2.22
ATP2A1O14983 RPS23P4-201ENST00000487908 423 ntBASIC1.19□□□□□ -2.22
ATP2A1O14983 RNU6-365P-201ENST00000517113 106 ntBASIC1.19□□□□□ -2.22
ATP2A1O14983 RNU6-111P-201ENST00000517179 105 ntBASIC1.19□□□□□ -2.22
ATP2A1O14983 AC097639.2-201ENST00000603159 172 ntBASIC1.19□□□□□ -2.22
ATP2A1O14983 AL022345.2-201ENST00000606307 135 ntBASIC1.19□□□□□ -2.22
ATP2A1O14983 SNORA25-201ENST00000384384 134 ntBASIC1.18□□□□□ -2.22
ATP2A1O14983 RNU2-70P-201ENST00000410718 179 ntBASIC1.18□□□□□ -2.22
ATP2A1O14983 OR2A41P-201ENST00000473586 105 ntBASIC1.18□□□□□ -2.22
ATP2A1O14983 RNA5SP220-201ENST00000516298 104 ntBASIC1.18□□□□□ -2.22
ATP2A1O14983 RNU7-181P-201ENST00000517234 74 ntBASIC1.18□□□□□ -2.22
ATP2A1O14983 RNU6-888P-201ENST00000363010 101 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 SNORD45.3-201ENST00000363836 72 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 SNORD115-28-201ENST00000363931 81 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 Y_RNA.199-201ENST00000364014 102 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 Y_RNA.634-201ENST00000364811 113 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 Y_RNA.308-201ENST00000365043 101 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 Y_RNA.370-201ENST00000365589 108 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 Y_RNA.401-201ENST00000383965 117 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 RNU6-42P-201ENST00000384165 107 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 SNORD61-201ENST00000384252 73 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 Y_RNA.489-201ENST00000384410 101 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
ATP2A1O14983 RNU6-910P-201ENST00000390844 107 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 Y_RNA.622-201ENST00000411091 108 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.17□□□□□ -2.22
ATP2A1O14983 SNRPGP8-201ENST00000454064 226 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 RPS29P1-201ENST00000465274 159 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 RNU6-693P-201ENST00000516134 107 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 RNU6-504P-201ENST00000516568 104 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 AC007751.1-201ENST00000529260 376 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 PRELID3BP2-201ENST00000605362 201 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 MIR6788-201ENST00000618842 66 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 AC027335.2-201ENST00000624030 375 ntBASIC1.17□□□□□ -2.22
ATP2A1O14983 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.17□□□□□ -2.22
ATP2A1O14983 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ATP2A1O14983 Y_RNA.66-201ENST00000362862 102 ntBASIC1.16□□□□□ -2.22
ATP2A1O14983 RNU4-38P-201ENST00000364472 129 ntBASIC1.16□□□□□ -2.22
ATP2A1O14983 RNU6-728P-201ENST00000365375 104 ntBASIC1.16□□□□□ -2.22
ATP2A1O14983 Y_RNA.537-201ENST00000384626 109 ntBASIC1.16□□□□□ -2.22
ATP2A1O14983 MIR548A2-201ENST00000384956 97 ntBASIC1.16□□□□□ -2.22
ATP2A1O14983 MIR518F-201ENST00000384973 87 ntBASIC1.16□□□□□ -2.22
ATP2A1O14983 SNORD12-201ENST00000391002 90 ntBASIC1.16□□□□□ -2.22
ATP2A1O14983 AC087499.4-201ENST00000448505 178 ntBASIC1.16□□□□□ -2.22
ATP2A1O14983 RNY3P16-201ENST00000516338 101 ntBASIC1.16□□□□□ -2.22
ATP2A1O14983 AP003716.2-201ENST00000528260 108 ntBASIC1.16□□□□□ -2.22
ATP2A1O14983 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ATP2A1O14983 AC022709.1-201ENST00000615967 87 ntBASIC1.16□□□□□ -2.22
ATP2A1O14983 MIR4251-201ENST00000635819 61 ntBASIC1.16□□□□□ -2.22
ATP2A1O14983 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ATP2A1O14983 Y_RNA.7-201ENST00000362352 102 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 Y_RNA.91-201ENST00000363042 107 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 RNA5SP264-201ENST00000363115 107 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 Y_RNA.121-201ENST00000363309 113 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 Y_RNA.363-201ENST00000365529 113 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 MIR532-201ENST00000385025 91 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 RNU6-493P-201ENST00000391321 108 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 RNU4-43P-201ENST00000410628 137 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 RNU2-13P-201ENST00000515909 113 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 SNORD79.1-201ENST00000516069 84 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 RNU7-40P-201ENST00000516397 64 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 RNU6-197P-201ENST00000516680 100 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 RNU6-1270P-201ENST00000517128 108 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 AC109810.1-201ENST00000534066 224 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 MIR4744-201ENST00000581563 82 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 AL078603.1-201ENST00000603824 313 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 MIR6857-201ENST00000613267 93 ntBASIC1.15□□□□□ -2.23
ATP2A1O14983 SNORD115-34-201ENST00000362441 82 ntBASIC1.14□□□□□ -2.23
ATP2A1O14983 SNORD115-12-201ENST00000362583 82 ntBASIC1.14□□□□□ -2.23
ATP2A1O14983 SNORD115-29-201ENST00000362834 82 ntBASIC1.14□□□□□ -2.23
ATP2A1O14983 SNORD115-9-201ENST00000362912 82 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms