Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU7-55P-201ENST00000459426 62 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 RNU6-479P-201ENST00000516348 105 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 MTND4P7-201ENST00000523876 130 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 MIR4520-1-201ENST00000582609 70 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 AC008507.4-201ENST00000585464 127 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 AC011603.4-201ENST00000611325 277 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 AC104010.1-201ENST00000616889 150 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 RNU6-517P-201ENST00000384362 110 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 MIR527-201ENST00000385244 85 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 AC016907.1-201ENST00000419483 435 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 MTND3P21-201ENST00000433774 331 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 RNU6-966P-201ENST00000516479 104 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 AC100767.1-201ENST00000528178 123 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 AC245884.10-201ENST00000597355 337 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 RNA5SP403-201ENST00000363598 108 ntBASIC-1.95□□□□□ -2.72
CHD1O14646 RNU6-192P-201ENST00000391253 100 ntBASIC-1.95□□□□□ -2.72
CHD1O14646 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.95□□□□□ -2.72
CHD1O14646 USMG5P1-201ENST00000425964 177 ntBASIC-1.95□□□□□ -2.72
CHD1O14646 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.95□□□□□ -2.72
CHD1O14646 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.95□□□□□ -2.72
CHD1O14646 RNU6-531P-201ENST00000516694 104 ntBASIC-1.95□□□□□ -2.72
CHD1O14646 MIR5696-201ENST00000578474 85 ntBASIC-1.95□□□□□ -2.72
CHD1O14646 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.95□□□□□ -2.72
CHD1O14646 MIR3674-201ENST00000636576 68 ntBASIC-1.95□□□□□ -2.72
CHD1O14646 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.96□□□□□ -2.72
CHD1O14646 RNY1P16-201ENST00000363063 111 ntBASIC-1.96□□□□□ -2.72
CHD1O14646 RNU1-141P-201ENST00000364623 158 ntBASIC-1.96□□□□□ -2.72
CHD1O14646 RNU6-601P-201ENST00000384540 107 ntBASIC-1.96□□□□□ -2.72
CHD1O14646 RNU7-116P-201ENST00000516940 62 ntBASIC-1.96□□□□□ -2.72
CHD1O14646 AC087683.2-201ENST00000611384 326 ntBASIC-1.96□□□□□ -2.72
CHD1O14646 AC104850.1-201ENST00000435940 476 ntBASIC-1.97□□□□□ -2.72
CHD1O14646 SNORD2-201ENST00000459163 69 ntBASIC-1.97□□□□□ -2.72
CHD1O14646 MTCO1P29-201ENST00000496868 288 ntBASIC-1.97□□□□□ -2.72
CHD1O14646 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.97□□□□□ -2.72
CHD1O14646 AC124312.5-201ENST00000604451 268 ntBASIC-1.97□□□□□ -2.72
CHD1O14646 AC091931.1-201ENST00000623488 728 ntBASIC-1.97□□□□□ -2.72
CHD1O14646 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.97□□□□□ -2.73
CHD1O14646 SNORD27.1-201ENST00000516319 72 ntBASIC-1.97□□□□□ -2.73
CHD1O14646 AL391262.2-201ENST00000622466 494 ntBASIC-1.97□□□□□ -2.73
CHD1O14646 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.97□□□□□ -2.73
CHD1O14646 RNU6-82P-201ENST00000363970 107 ntBASIC-1.98□□□□□ -2.73
CHD1O14646 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.98□□□□□ -2.73
CHD1O14646 RNU6-456P-201ENST00000384493 107 ntBASIC-1.98□□□□□ -2.73
CHD1O14646 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.98□□□□□ -2.73
CHD1O14646 MIR548O-201ENST00000408583 114 ntBASIC-1.98□□□□□ -2.73
CHD1O14646 SNORD18.2-201ENST00000459604 70 ntBASIC-1.98□□□□□ -2.73
CHD1O14646 RPS29P24-201ENST00000486345 171 ntBASIC-1.98□□□□□ -2.73
CHD1O14646 MTCO2P30-201ENST00000503662 364 ntBASIC-1.98□□□□□ -2.73
CHD1O14646 YWHAEP2-201ENST00000580066 112 ntBASIC-1.98□□□□□ -2.73
CHD1O14646 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.98□□□□□ -2.73
CHD1O14646 MTATP6P20-201ENST00000414147 562 ntBASIC-1.99□□□□□ -2.73
CHD1O14646 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.99□□□□□ -2.73
CHD1O14646 RNU6-751P-201ENST00000516382 101 ntBASIC-1.99□□□□□ -2.73
CHD1O14646 MIR335-201ENST00000362173 94 ntBASIC-2□□□□□ -2.73
CHD1O14646 RNU6-790P-201ENST00000384479 105 ntBASIC-2□□□□□ -2.73
CHD1O14646 RNU6-1250P-201ENST00000391218 107 ntBASIC-2□□□□□ -2.73
CHD1O14646 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-2□□□□□ -2.73
CHD1O14646 RNU6-118P-201ENST00000516552 102 ntBASIC-2□□□□□ -2.73
CHD1O14646 AP003733.2-201ENST00000529409 171 ntBASIC-2□□□□□ -2.73
CHD1O14646 AC087752.4-201ENST00000605911 462 ntBASIC-2□□□□□ -2.73
CHD1O14646 AC073534.2-201ENST00000620377 381 ntBASIC-2□□□□□ -2.73
CHD1O14646 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-2□□□□□ -2.73
CHD1O14646 SNORD115-28-201ENST00000363931 81 ntBASIC-2□□□□□ -2.73
CHD1O14646 RNU6-312P-201ENST00000364629 107 ntBASIC-2□□□□□ -2.73
CHD1O14646 Y_RNA.377-201ENST00000365644 108 ntBASIC-2□□□□□ -2.73
CHD1O14646 MIR548K-201ENST00000408406 116 ntBASIC-2□□□□□ -2.73
CHD1O14646 Y_RNA.630-201ENST00000411370 108 ntBASIC-2□□□□□ -2.73
CHD1O14646 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-2□□□□□ -2.73
CHD1O14646 snoU13.13-201ENST00000458842 104 ntBASIC-2□□□□□ -2.73
CHD1O14646 SERF1AP1-201ENST00000514575 187 ntBASIC-2□□□□□ -2.73
CHD1O14646 AL353803.5-201ENST00000599815 141 ntBASIC-2□□□□□ -2.73
CHD1O14646 RNU6-449P-201ENST00000383914 107 ntBASIC-2.01□□□□□ -2.73
CHD1O14646 MIR626-201ENST00000385032 94 ntBASIC-2.01□□□□□ -2.73
CHD1O14646 RNU2-9P-201ENST00000410194 145 ntBASIC-2.01□□□□□ -2.73
CHD1O14646 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-2.01□□□□□ -2.73
CHD1O14646 YWHAEP3-201ENST00000582767 121 ntBASIC-2.01□□□□□ -2.73
CHD1O14646 AL357078.3-201ENST00000607528 618 ntBASIC-2.01□□□□□ -2.73
CHD1O14646 RNU6-154P-201ENST00000384306 106 ntBASIC-2.02□□□□□ -2.73
CHD1O14646 RNY3P9-201ENST00000384727 106 ntBASIC-2.02□□□□□ -2.73
CHD1O14646 AL603914.1-201ENST00000401964 204 ntBASIC-2.02□□□□□ -2.73
CHD1O14646 RNU6-980P-201ENST00000516925 103 ntBASIC-2.02□□□□□ -2.73
CHD1O14646 MIR548H5-201ENST00000580314 60 ntBASIC-2.02□□□□□ -2.73
CHD1O14646 MIR3682-201ENST00000581338 84 ntBASIC-2.02□□□□□ -2.73
CHD1O14646 AC245014.2-201ENST00000603689 287 ntBASIC-2.02□□□□□ -2.73
CHD1O14646 AC006566.1-201ENST00000608943 513 ntBASIC-2.02□□□□□ -2.73
CHD1O14646 MIR8068-201ENST00000618032 68 ntBASIC-2.02□□□□□ -2.73
CHD1O14646 RNU6-1209P-201ENST00000363655 107 ntBASIC-2.03□□□□□ -2.73
CHD1O14646 Y_RNA.323-201ENST00000365157 109 ntBASIC-2.03□□□□□ -2.73
CHD1O14646 RNU6-1323P-201ENST00000384025 107 ntBASIC-2.03□□□□□ -2.73
CHD1O14646 AL603910.2-201ENST00000407268 136 ntBASIC-2.03□□□□□ -2.73
CHD1O14646 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-2.03□□□□□ -2.73
CHD1O14646 MTND3P23-201ENST00000431980 347 ntBASIC-2.03□□□□□ -2.73
CHD1O14646 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-2.03□□□□□ -2.73
CHD1O14646 AC141846.1-201ENST00000568348 142 ntBASIC-2.03□□□□□ -2.73
CHD1O14646 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-2.03□□□□□ -2.73
CHD1O14646 Y_RNA.432-201ENST00000384087 111 ntBASIC-2.03□□□□□ -2.73
CHD1O14646 UBE2V1P7-201ENST00000446395 340 ntBASIC-2.03□□□□□ -2.73
CHD1O14646 AC023449.1-201ENST00000454464 154 ntBASIC-2.03□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms