Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.69□□□□□ -2.68
HMGN4O00479 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.69□□□□□ -2.68
HMGN4O00479 SNORD11-201ENST00000459124 84 ntBASIC-1.69□□□□□ -2.68
HMGN4O00479 MIR548AE1-201ENST00000583292 70 ntBASIC-1.69□□□□□ -2.68
HMGN4O00479 AC245014.2-201ENST00000603689 287 ntBASIC-1.69□□□□□ -2.68
HMGN4O00479 MIR409-201ENST00000362237 79 ntBASIC-1.7□□□□□ -2.68
HMGN4O00479 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.7□□□□□ -2.68
HMGN4O00479 SNORD74.6-201ENST00000364796 70 ntBASIC-1.7□□□□□ -2.68
HMGN4O00479 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.7□□□□□ -2.68
HMGN4O00479 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.7□□□□□ -2.68
HMGN4O00479 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.7□□□□□ -2.68
HMGN4O00479 AC073415.1-201ENST00000449240 153 ntBASIC-1.7□□□□□ -2.68
HMGN4O00479 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.7□□□□□ -2.68
HMGN4O00479 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.7□□□□□ -2.68
HMGN4O00479 MIR548H5-201ENST00000580314 60 ntBASIC-1.7□□□□□ -2.68
HMGN4O00479 AC092954.2-201ENST00000609103 430 ntBASIC-1.7□□□□□ -2.68
HMGN4O00479 RNU6-500P-201ENST00000362349 107 ntBASIC-1.71□□□□□ -2.68
HMGN4O00479 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.71□□□□□ -2.68
HMGN4O00479 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.71□□□□□ -2.68
HMGN4O00479 RNA5SP133-201ENST00000363368 119 ntBASIC-1.71□□□□□ -2.68
HMGN4O00479 RNY1P13-201ENST00000365030 105 ntBASIC-1.71□□□□□ -2.68
HMGN4O00479 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.71□□□□□ -2.68
HMGN4O00479 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.71□□□□□ -2.68
HMGN4O00479 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-1.71□□□□□ -2.68
HMGN4O00479 SNORA40.17-201ENST00000517256 115 ntBASIC-1.71□□□□□ -2.68
HMGN4O00479 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.71□□□□□ -2.68
HMGN4O00479 AC127455.1-201ENST00000565496 145 ntBASIC-1.71□□□□□ -2.68
HMGN4O00479 AP001542.1-201ENST00000591314 200 ntBASIC-1.71□□□□□ -2.68
HMGN4O00479 AC008536.2-201ENST00000607284 349 ntBASIC-1.71□□□□□ -2.68
HMGN4O00479 AC011603.4-201ENST00000611325 277 ntBASIC-1.71□□□□□ -2.68
HMGN4O00479 DLEU2_5.1-201ENST00000615567 84 ntBASIC-1.71□□□□□ -2.68
HMGN4O00479 MIR7844-201ENST00000616161 122 ntBASIC-1.71□□□□□ -2.68
HMGN4O00479 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.71□□□□□ -2.68
HMGN4O00479 MIR20A-201ENST00000362279 71 ntBASIC-1.72□□□□□ -2.68
HMGN4O00479 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.72□□□□□ -2.68
HMGN4O00479 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.72□□□□□ -2.68
HMGN4O00479 RNU6-181P-201ENST00000363225 107 ntBASIC-1.72□□□□□ -2.68
HMGN4O00479 RNU6-879P-201ENST00000364328 108 ntBASIC-1.72□□□□□ -2.68
HMGN4O00479 RNU6-996P-201ENST00000365438 107 ntBASIC-1.72□□□□□ -2.68
HMGN4O00479 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.72□□□□□ -2.68
HMGN4O00479 RNU6-449P-201ENST00000383914 107 ntBASIC-1.72□□□□□ -2.68
HMGN4O00479 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.72□□□□□ -2.68
HMGN4O00479 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.72□□□□□ -2.68
HMGN4O00479 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.72□□□□□ -2.68
HMGN4O00479 RNU6-445P-201ENST00000516949 107 ntBASIC-1.72□□□□□ -2.68
HMGN4O00479 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.73□□□□□ -2.69
HMGN4O00479 RNU4-50P-201ENST00000364361 141 ntBASIC-1.73□□□□□ -2.69
HMGN4O00479 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.73□□□□□ -2.69
HMGN4O00479 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.73□□□□□ -2.69
HMGN4O00479 MIR1278-201ENST00000408753 81 ntBASIC-1.73□□□□□ -2.69
HMGN4O00479 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.73□□□□□ -2.69
HMGN4O00479 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.73□□□□□ -2.69
HMGN4O00479 AC004223.4-201ENST00000612426 332 ntBASIC-1.73□□□□□ -2.69
HMGN4O00479 AL354950.2-201ENST00000617939 290 ntBASIC-1.73□□□□□ -2.69
HMGN4O00479 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.73□□□□□ -2.69
HMGN4O00479 RNU6-595P-201ENST00000363944 107 ntBASIC-1.74□□□□□ -2.69
HMGN4O00479 RNU6-973P-201ENST00000364690 107 ntBASIC-1.74□□□□□ -2.69
HMGN4O00479 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.74□□□□□ -2.69
HMGN4O00479 MIR599-201ENST00000385069 95 ntBASIC-1.74□□□□□ -2.69
HMGN4O00479 RNA5SP266-201ENST00000410273 108 ntBASIC-1.74□□□□□ -2.69
HMGN4O00479 HLA-S-202ENST00000425174 53 ntBASIC-1.74□□□□□ -2.69
HMGN4O00479 MTATP6P13-201ENST00000438531 667 ntBASIC-1.74□□□□□ -2.69
HMGN4O00479 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.74□□□□□ -2.69
HMGN4O00479 RNU6-436P-201ENST00000516171 114 ntBASIC-1.74□□□□□ -2.69
HMGN4O00479 SNORD36C-201ENST00000516733 66 ntBASIC-1.74□□□□□ -2.69
HMGN4O00479 AL118558.2-201ENST00000556294 238 ntBASIC-1.74□□□□□ -2.69
HMGN4O00479 AP000240.1-201ENST00000609910 452 ntBASIC-1.74□□□□□ -2.69
HMGN4O00479 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.75□□□□□ -2.69
HMGN4O00479 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.75□□□□□ -2.69
HMGN4O00479 AC093423.1-201ENST00000440817 142 ntBASIC-1.75□□□□□ -2.69
HMGN4O00479 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.75□□□□□ -2.69
HMGN4O00479 RNU7-63P-201ENST00000459054 62 ntBASIC-1.75□□□□□ -2.69
HMGN4O00479 RNU7-45P-201ENST00000459460 63 ntBASIC-1.75□□□□□ -2.69
HMGN4O00479 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.75□□□□□ -2.69
HMGN4O00479 RNA5SP476-201ENST00000516613 103 ntBASIC-1.75□□□□□ -2.69
HMGN4O00479 snoU83B.1-201ENST00000517136 88 ntBASIC-1.75□□□□□ -2.69
HMGN4O00479 AP003733.2-201ENST00000529409 171 ntBASIC-1.75□□□□□ -2.69
HMGN4O00479 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.75□□□□□ -2.69
HMGN4O00479 MTND5P40-201ENST00000559945 246 ntBASIC-1.75□□□□□ -2.69
HMGN4O00479 AC055872.1-201ENST00000570978 278 ntBASIC-1.75□□□□□ -2.69
HMGN4O00479 AC138207.3-201ENST00000585289 166 ntBASIC-1.75□□□□□ -2.69
HMGN4O00479 AC018638.8-201ENST00000588755 281 ntBASIC-1.75□□□□□ -2.69
HMGN4O00479 RNU7-10P-201ENST00000607194 63 ntBASIC-1.75□□□□□ -2.69
HMGN4O00479 SNORD115-25-201ENST00000362619 82 ntBASIC-1.76□□□□□ -2.69
HMGN4O00479 RNU4-28P-201ENST00000364739 141 ntBASIC-1.76□□□□□ -2.69
HMGN4O00479 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.76□□□□□ -2.69
HMGN4O00479 RNU6-831P-201ENST00000384548 107 ntBASIC-1.76□□□□□ -2.69
HMGN4O00479 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.76□□□□□ -2.69
HMGN4O00479 AC084290.1-201ENST00000434995 374 ntBASIC-1.76□□□□□ -2.69
HMGN4O00479 AC244090.1-201ENST00000441884 93 ntBASIC-1.76□□□□□ -2.69
HMGN4O00479 RNU7-13P-201ENST00000516413 62 ntBASIC-1.76□□□□□ -2.69
HMGN4O00479 RNU7-115P-201ENST00000516433 55 ntBASIC-1.76□□□□□ -2.69
HMGN4O00479 AC026421.1-201ENST00000519101 163 ntBASIC-1.76□□□□□ -2.69
HMGN4O00479 AC145423.2-201ENST00000610631 239 ntBASIC-1.76□□□□□ -2.69
HMGN4O00479 AP001506.1-201ENST00000615444 211 ntBASIC-1.76□□□□□ -2.69
HMGN4O00479 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.77□□□□□ -2.69
HMGN4O00479 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.77□□□□□ -2.69
HMGN4O00479 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.77□□□□□ -2.69
HMGN4O00479 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.77□□□□□ -2.69
HMGN4O00479 RNU6-128P-201ENST00000383976 107 ntBASIC-1.77□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms