Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 DEFB108E-201ENST00000524692 240 ntBASIC0.64□□□□□ -2.31
PDLIM1O00151 Y_RNA.168-201ENST00000363740 102 ntBASIC0.63□□□□□ -2.31
PDLIM1O00151 Y_RNA.376-201ENST00000365638 108 ntBASIC0.63□□□□□ -2.31
PDLIM1O00151 RNU6-211P-201ENST00000384047 107 ntBASIC0.63□□□□□ -2.31
PDLIM1O00151 RNU6-1289P-201ENST00000384431 106 ntBASIC0.63□□□□□ -2.31
PDLIM1O00151 RNU6-110P-201ENST00000384508 104 ntBASIC0.63□□□□□ -2.31
PDLIM1O00151 RNU6-1203P-201ENST00000410703 110 ntBASIC0.63□□□□□ -2.31
PDLIM1O00151 RPS26P5-201ENST00000418544 335 ntBASIC0.63□□□□□ -2.31
PDLIM1O00151 snoU13.16-201ENST00000459350 104 ntBASIC0.63□□□□□ -2.31
PDLIM1O00151 RNU6-958P-201ENST00000516995 106 ntBASIC0.63□□□□□ -2.31
PDLIM1O00151 RNU6-365P-201ENST00000517113 106 ntBASIC0.63□□□□□ -2.31
PDLIM1O00151 AC100767.1-201ENST00000528178 123 ntBASIC0.63□□□□□ -2.31
PDLIM1O00151 MIR5688-201ENST00000580619 83 ntBASIC0.63□□□□□ -2.31
PDLIM1O00151 SNORA4-201ENST00000584302 138 ntBASIC0.63□□□□□ -2.31
PDLIM1O00151 AL078603.1-201ENST00000603824 313 ntBASIC0.63□□□□□ -2.31
PDLIM1O00151 UBE2WP1-201ENST00000362030 340 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-34-201ENST00000362441 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-12-201ENST00000362583 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-29-201ENST00000362834 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-9-201ENST00000362912 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-21-201ENST00000362963 81 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-14-201ENST00000363090 81 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-13-201ENST00000363358 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-41-201ENST00000363608 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-11-201ENST00000363616 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-5-201ENST00000363633 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-39-201ENST00000363694 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-4-201ENST00000363810 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-16-201ENST00000363887 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-6-201ENST00000363942 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-42-201ENST00000364273 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-15-201ENST00000364809 81 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-1-201ENST00000364961 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-26-201ENST00000365067 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-10-201ENST00000365073 81 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-43-201ENST00000365503 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-36-201ENST00000365629 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 Y_RNA.494-201ENST00000384432 111 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 RNU6-713P-201ENST00000384761 107 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 RNU6-205P-201ENST00000390858 107 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 AC087499.4-201ENST00000448505 178 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 RNU6-126P-201ENST00000516685 103 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 RNU6-1153P-201ENST00000516760 105 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 SNORD115-40-201ENST00000606510 82 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 AC134878.1-201ENST00000619901 243 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 MIR6835-201ENST00000621552 64 ntBASIC0.62□□□□□ -2.31
PDLIM1O00151 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.61□□□□□ -2.31
PDLIM1O00151 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
PDLIM1O00151 Y_RNA.117-201ENST00000363294 101 ntBASIC0.61□□□□□ -2.31
PDLIM1O00151 Y_RNA.572-201ENST00000384757 98 ntBASIC0.61□□□□□ -2.31
PDLIM1O00151 MIR518E-201ENST00000385252 88 ntBASIC0.61□□□□□ -2.31
PDLIM1O00151 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.61□□□□□ -2.31
PDLIM1O00151 MIR1827-201ENST00000408549 66 ntBASIC0.61□□□□□ -2.31
PDLIM1O00151 MTCYBP6-201ENST00000441810 138 ntBASIC0.61□□□□□ -2.31
PDLIM1O00151 AC007751.1-201ENST00000529260 376 ntBASIC0.61□□□□□ -2.31
PDLIM1O00151 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.61□□□□□ -2.31
PDLIM1O00151 Y_RNA.11-201ENST00000362375 109 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 Y_RNA.44-201ENST00000362676 108 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 Y_RNA.229-201ENST00000364347 113 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 Y_RNA.275-201ENST00000364726 110 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 RNU6-125P-201ENST00000384505 107 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 SNORD105-201ENST00000386910 85 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 MT-TN-201ENST00000387400 73 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 SNORA40.5-201ENST00000391061 128 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 TRBVB-201ENST00000477100 408 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 Y_RNA.673-201ENST00000516306 88 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 RNU6-504P-201ENST00000516568 104 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 RNU6-1223P-201ENST00000517124 104 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 RNU6-1270P-201ENST00000517128 108 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 AP003484.1-201ENST00000530974 250 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 MIR5000-201ENST00000577717 103 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 AC011195.1-201ENST00000578177 177 ntBASIC0.6□□□□□ -2.31
PDLIM1O00151 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.6□□□□□ -2.31
PDLIM1O00151 Y_RNA.37-201ENST00000362606 108 ntBASIC0.59□□□□□ -2.31
PDLIM1O00151 RNU6-934P-201ENST00000365154 107 ntBASIC0.59□□□□□ -2.31
PDLIM1O00151 RNU6-1227P-201ENST00000383981 107 ntBASIC0.59□□□□□ -2.31
PDLIM1O00151 SNORD61-201ENST00000384252 73 ntBASIC0.59□□□□□ -2.31
PDLIM1O00151 MIR626-201ENST00000385032 94 ntBASIC0.59□□□□□ -2.31
PDLIM1O00151 RNU6-1109P-201ENST00000391187 107 ntBASIC0.59□□□□□ -2.31
PDLIM1O00151 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.59□□□□□ -2.31
PDLIM1O00151 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.59□□□□□ -2.31
PDLIM1O00151 RNU6-1299P-201ENST00000516316 100 ntBASIC0.59□□□□□ -2.31
PDLIM1O00151 MIR4714-201ENST00000580728 77 ntBASIC0.59□□□□□ -2.31
PDLIM1O00151 MIR4264-201ENST00000583520 66 ntBASIC0.59□□□□□ -2.31
PDLIM1O00151 RMST_2.1-201ENST00000617263 136 ntBASIC0.59□□□□□ -2.31
PDLIM1O00151 MIR377-201ENST00000362145 69 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 RNU6-238P-201ENST00000363313 106 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 Y_RNA.237-201ENST00000364439 102 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 RNU6-740P-201ENST00000364734 105 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 SNORD24-201ENST00000383884 75 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 SNORA24-201ENST00000384096 131 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 SNORA27-201ENST00000384323 126 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 MIR518F-201ENST00000384973 87 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 RNU1-119P-201ENST00000391122 165 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 SNORA26-201ENST00000391286 122 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 RNU2-70P-201ENST00000410718 179 ntBASIC0.58□□□□□ -2.32
PDLIM1O00151 AC090844.1-201ENST00000422019 156 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms