Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AL356280.1-201ENST00000603614 379 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AC095038.3-201ENST00000634439 195 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AC080100.1-201ENST00000624239 5356 ntBASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR340-201ENST00000362125 95 ntBASIC2.31□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU4-67P-201ENST00000364569 141 ntBASIC2.31□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU6-675P-201ENST00000384236 104 ntBASIC2.31□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU6-1072P-201ENST00000384703 107 ntBASIC2.31□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU6-443P-201ENST00000384780 107 ntBASIC2.31□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR524-201ENST00000385242 87 ntBASIC2.31□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU11-5P-201ENST00000391216 129 ntBASIC2.31□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AC011753.1-201ENST00000451001 220 ntBASIC2.31□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 CKS1BP2-201ENST00000497342 240 ntBASIC2.31□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 Y_RNA.659-201ENST00000515994 113 ntBASIC2.31□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU1-41P-201ENST00000516161 162 ntBASIC2.31□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU1-48P-201ENST00000516400 162 ntBASIC2.31□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR4777-201ENST00000583710 86 ntBASIC2.31□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR6073-201ENST00000352083 89 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU6-363P-201ENST00000362895 105 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU1-23P-201ENST00000363361 144 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 SNORA38-201ENST00000363946 132 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 snoU2-30.1-201ENST00000365012 70 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 SNORD115-35-201ENST00000365122 82 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 Y_RNA.467-201ENST00000384297 102 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 SNORA8-201ENST00000384574 139 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR1261-201ENST00000408659 82 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 SNORD45.4-201ENST00000516629 73 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AC004812.1-201ENST00000540773 146 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR4648-201ENST00000580107 72 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR3199-1-201ENST00000582434 88 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 U6.108-201ENST00000637764 58 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR7515-201ENST00000637837 67 ntBASIC2.3□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 SNORD115-13-201ENST00000363358 82 ntBASIC2.29□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 SNORD115-16-201ENST00000363887 82 ntBASIC2.29□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 SNORD115-1-201ENST00000364961 82 ntBASIC2.29□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 Y_RNA.332-201ENST00000365271 113 ntBASIC2.29□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AL022718.1-201ENST00000412004 84 ntBASIC2.29□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.29□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU7-26P-201ENST00000458980 63 ntBASIC2.29□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.29□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.29□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AP002004.2-201ENST00000531656 154 ntBASIC2.29□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR4666B-201ENST00000578142 81 ntBASIC2.29□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AC078899.2-201ENST00000595282 212 ntBASIC2.29□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR6132-201ENST00000622083 109 ntBASIC2.29□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR6766-201ENST00000622641 72 ntBASIC2.29□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR21-201ENST00000362134 72 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU6-661P-201ENST00000362409 107 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU1-52P-201ENST00000384190 164 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNY1P4-201ENST00000384595 115 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNU6-679P-201ENST00000391003 106 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR889-201ENST00000401280 79 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 Y_RNA.611-201ENST00000410682 108 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RNA5SP144-201ENST00000410846 116 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AC096949.1-201ENST00000412047 152 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 SNRPGP14-201ENST00000435400 219 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AC099677.2-201ENST00000436385 175 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RPS23P4-201ENST00000487908 423 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RPL23AP63-201ENST00000498752 471 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 AL358944.1-201ENST00000528537 144 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR4658-201ENST00000584344 65 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 MIR338-201ENST00000636369 67 ntBASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
C1QTNF3-AMACRE9PGA6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 Y_RNA.191-201ENST00000363972 113 ntBASIC2.27□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SNORD45B-201ENST00000364617 72 ntBASIC2.27□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU6-219P-201ENST00000364728 107 ntBASIC2.27□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU6-652P-201ENST00000365488 107 ntBASIC2.27□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU6-24P-201ENST00000384440 107 ntBASIC2.27□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SNORA80E-201ENST00000384744 137 ntBASIC2.27□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 MIR221-201ENST00000385135 110 ntBASIC2.27□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNA5SP181-201ENST00000410246 98 ntBASIC2.27□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AL353813.1-201ENST00000440700 253 ntBASIC2.27□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU7-171P-201ENST00000459581 62 ntBASIC2.27□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNA5SP82-201ENST00000516707 92 ntBASIC2.27□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.27□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.27□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AC131280.1-202ENST00000624067 4211 ntBASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 Y_RNA.95-201ENST00000363079 95 ntBASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SNORD115-19-201ENST00000363098 82 ntBASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SNORD115-18-201ENST00000363293 82 ntBASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 Y_RNA.241-201ENST00000364470 117 ntBASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 SNORD115-17-201ENST00000364612 82 ntBASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU6-887P-201ENST00000410660 100 ntBASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AC073261.1-201ENST00000429409 121 ntBASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AL035398.1-201ENST00000430869 322 ntBASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU2-11P-201ENST00000459191 187 ntBASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU7-45P-201ENST00000459460 63 ntBASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 AL163195.1-201ENST00000496941 348 ntBASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 Y_RNA.705-201ENST00000516862 110 ntBASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 MIR4668-201ENST00000582284 70 ntBASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 Y_RNA.171-201ENST00000363760 102 ntBASIC2.25□□□□□ -2.05
C1QTNF3-AMACRE9PGA6 RNU6-776P-201ENST00000364403 104 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms