Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RNU6-1054P-201ENST00000411293 104 ntBASIC1.09□□□□□ -2.23
SRRM4A7MD48 AC093850.1-201ENST00000454121 251 ntBASIC1.09□□□□□ -2.23
SRRM4A7MD48 AC114811.1-201ENST00000507207 168 ntBASIC1.09□□□□□ -2.23
SRRM4A7MD48 SNORD45.4-201ENST00000516629 73 ntBASIC1.09□□□□□ -2.23
SRRM4A7MD48 AC097639.2-201ENST00000603159 172 ntBASIC1.09□□□□□ -2.23
SRRM4A7MD48 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
SRRM4A7MD48 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.24
SRRM4A7MD48 MIR26B-201ENST00000362251 77 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 Y_RNA.66-201ENST00000362862 102 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 SNORD14E-201ENST00000364009 85 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 RNU6-151P-201ENST00000364158 107 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 RNU6-449P-201ENST00000383914 107 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 SNORA70.7-201ENST00000384159 133 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 Y_RNA.506-201ENST00000384494 102 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 RNU6-125P-201ENST00000384505 107 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 Y_RNA.521-201ENST00000384560 114 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 RNU6-939P-201ENST00000384634 107 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 RNU6-768P-201ENST00000384683 107 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 MIR150-201ENST00000385048 84 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 MIR758-201ENST00000390227 88 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 MIR802-201ENST00000390235 94 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 SNORA17.3-201ENST00000391159 129 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 SNORA26-201ENST00000391286 122 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.08□□□□□ -2.24
SRRM4A7MD48 RNU7-200P-201ENST00000516105 62 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 RNU6-346P-201ENST00000516288 111 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 RNU6-917P-201ENST00000516294 104 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 RNA5SP153-201ENST00000516498 76 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 RNU7-121P-201ENST00000516604 62 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 RNU6-365P-201ENST00000517113 106 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 AL160236.1-201ENST00000556317 195 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 AC068338.1-201ENST00000565567 176 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 MIR378D2-201ENST00000580636 98 ntBASIC1.08□□□□□ -2.24
SRRM4A7MD48 RNU6-978P-201ENST00000364371 103 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 Y_RNA.337-201ENST00000365312 102 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 RNU6-442P-201ENST00000383968 104 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 RNU6-746P-201ENST00000384112 109 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 RNU6-187P-201ENST00000384139 106 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 MIR136-201ENST00000385207 82 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 Y_RNA.580-201ENST00000391004 95 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 RPS29P29-201ENST00000456396 171 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.07□□□□□ -2.24
SRRM4A7MD48 Y_RNA.666-201ENST00000516187 112 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 SNORD116-25-201ENST00000516517 92 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 RNU6-126P-201ENST00000516685 103 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 Y_RNA.703-201ENST00000516846 111 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 MIR3133-201ENST00000583157 78 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 FAM106DP-201ENST00000586416 501 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 DNAJC19P2-201ENST00000593340 302 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 MTND1P7-201ENST00000632801 297 ntBASIC1.07□□□□□ -2.24
SRRM4A7MD48 ZNF209P-201ENST00000593450 2304 ntBASIC1.06□□□□□ -2.24
SRRM4A7MD48 RNU6-268P-201ENST00000364174 107 ntBASIC1.06□□□□□ -2.24
SRRM4A7MD48 RNU4-11P-201ENST00000365287 132 ntBASIC1.06□□□□□ -2.24
SRRM4A7MD48 RNY1P5-201ENST00000383890 115 ntBASIC1.06□□□□□ -2.24
SRRM4A7MD48 Y_RNA.393-201ENST00000383936 102 ntBASIC1.06□□□□□ -2.24
SRRM4A7MD48 SNORD41-201ENST00000386967 70 ntBASIC1.06□□□□□ -2.24
SRRM4A7MD48 SNORD12-201ENST00000391002 90 ntBASIC1.06□□□□□ -2.24
SRRM4A7MD48 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.06□□□□□ -2.24
SRRM4A7MD48 SNRPGP14-201ENST00000435400 219 ntBASIC1.06□□□□□ -2.24
SRRM4A7MD48 RNU6-1270P-201ENST00000517128 108 ntBASIC1.06□□□□□ -2.24
SRRM4A7MD48 SNORA70.22-201ENST00000517160 124 ntBASIC1.06□□□□□ -2.24
SRRM4A7MD48 AC007751.1-201ENST00000529260 376 ntBASIC1.06□□□□□ -2.24
SRRM4A7MD48 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.06□□□□□ -2.24
SRRM4A7MD48 DNAJC19P9-201ENST00000555084 351 ntBASIC1.06□□□□□ -2.24
SRRM4A7MD48 Y_RNA.778-201ENST00000620203 90 ntBASIC1.06□□□□□ -2.24
SRRM4A7MD48 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.06□□□□□ -2.24
SRRM4A7MD48 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
SRRM4A7MD48 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SRRM4A7MD48 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SRRM4A7MD48 RNU6-1336P-201ENST00000383886 109 ntBASIC1.05□□□□□ -2.24
SRRM4A7MD48 SNORD61-201ENST00000384252 73 ntBASIC1.05□□□□□ -2.24
SRRM4A7MD48 SNORA25-201ENST00000384384 134 ntBASIC1.05□□□□□ -2.24
SRRM4A7MD48 MIR548A2-201ENST00000384956 97 ntBASIC1.05□□□□□ -2.24
SRRM4A7MD48 MIR548O-201ENST00000408583 114 ntBASIC1.05□□□□□ -2.24
SRRM4A7MD48 AC015922.2-201ENST00000435593 184 ntBASIC1.05□□□□□ -2.24
SRRM4A7MD48 RNU1-123P-201ENST00000458950 160 ntBASIC1.05□□□□□ -2.24
SRRM4A7MD48 RNU7-25P-201ENST00000516544 62 ntBASIC1.05□□□□□ -2.24
SRRM4A7MD48 RNU6-504P-201ENST00000516568 104 ntBASIC1.05□□□□□ -2.24
SRRM4A7MD48 RNU6-165P-201ENST00000517170 99 ntBASIC1.05□□□□□ -2.24
SRRM4A7MD48 AC006441.5-201ENST00000612680 209 ntBASIC1.05□□□□□ -2.24
SRRM4A7MD48 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.05□□□□□ -2.24
SRRM4A7MD48 MIR6844-201ENST00000637122 62 ntBASIC1.05□□□□□ -2.24
SRRM4A7MD48 RNA5SP327-201ENST00000362494 101 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 RNU6-888P-201ENST00000363010 101 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 Y_RNA.140-201ENST00000363474 103 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 RNU6-1082P-201ENST00000364574 107 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 RNU6-597P-201ENST00000365620 102 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 SNORD24-201ENST00000383884 75 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 Y_RNA.400-201ENST00000383963 111 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 SNORA1-201ENST00000384107 130 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 SNORD38C-201ENST00000384381 69 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 MIR518F-201ENST00000384973 87 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SRRM4A7MD48 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SRRM4A7MD48 SNORD37.2-201ENST00000391075 66 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 RNU6-588P-201ENST00000410281 105 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 RNU6-955P-201ENST00000410497 104 ntBASIC1.04□□□□□ -2.24
SRRM4A7MD48 RNU6-693P-201ENST00000516134 107 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms